RNA–Protein interactions for RNA: ENST00000461778.5

NR1H3-215, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 5

Gene NR1H3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-215	ENST00000461778	ELL	P55199	621 aa	Predicted RBP	10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	ATP5J2	P56134	94 aa		10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	SSBP2	P81877	361 aa	Predicted RBP	10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	KHDC3L	Q587J8	217 aa		10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	TEPP	Q6URK8	271 aa		10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	CLEC2A	Q6UVW9	174 aa		10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	ATRAID	Q6UW56	229 aa		10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	MRPL41	Q8IXM3	137 aa	Known RBP	10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	DYNAP	Q8N1N2	210 aa		10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778		Q8N6K4	173 aa		10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	EAF1	Q96JC9	268 aa	Predicted RBP	10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778		Q96MF0	132 aa		10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	P2RX4	Q99571	388 aa		10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	EIF5A2	Q9GZV4	153 aa	Known RBP	10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	SLC35B3	Q9H1N7	401 aa		10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	KCNIP2	Q9NS61	270 aa		10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	HILPDA	Q9Y5L2	63 aa		10.46	□□□□□ -0.73
NR1H3-215	ENST00000461778	SMCO3	A2RU48	225 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	TEX22	C9J3V5	150 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	SRP19	P09132	144 aa	Known RBP	10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	OR13C7	P0DN81	318 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	PRR20E	P86478	221 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	PRR20C	P86479	221 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	PRR20D	P86480	221 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	PRR20B	P86481	221 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	PRR20A	P86496	221 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	GAMT	Q14353	236 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	ICAM4	Q14773	271 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	LCN15	Q6UWW0	184 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	SVBP	Q8N300	66 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	OR2T10	Q8NGZ9	312 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	RARRES2	Q99969	163 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	FBXL15	Q9H469	300 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	LPAR2	Q9HBW0	351 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	SLC45A2	Q9UMX9	530 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	ABCA2	Q9BZC7	2435 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	NAV3	Q8IVL0	2385 aa		10.45	□□□□□ -0.74
NR1H3-215	ENST00000461778	LOC102723971	A0A1B0GUV8	181 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	MAP1LC3B2	A6NCE7	125 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	FCN1	O00602	326 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	NBR2	O15453	112 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	HSPB1	P04792	205 aa	Known RBP	10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	CRYGC	P07315	174 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	SNRNP70	P08621	437 aa	Known RBP	10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	LINC00869	P0C866	280 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	LGALS4	P56470	323 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	DEFA5	Q01523	94 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	RAB31	Q13636	194 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	SSX2	Q16385	188 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	TNXA	Q16473	311 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	MLANA	Q16655	118 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	GUCA2B	Q16661	112 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	SMR3A	Q99954	134 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	MAP1LC3B	Q9GZQ8	125 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	PXMP4	Q9Y6I8	212 aa		10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	ZNF469	Q96JG9	3925 aa	Predicted RBP	10.44	□□□□□ -0.74
NR1H3-215	ENST00000461778	IGHV4-30-2	A0A087WSY4	118 aa		10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778		A0A1B0GV50	99 aa		10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778		A0A1W2PRD5	423 aa		10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778		A0A1W2PRF3	423 aa		10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778		A0A1W2PRM7	423 aa		10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778	ACTL6B	O94805	426 aa		10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778	HNF4G	Q14541	408 aa		10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778	C5orf64	Q2M2E5	130 aa		10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778	KRTAP21-3	Q3LHN1	58 aa		10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778	MIC13	Q5XKP0	118 aa		10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778	FAM122C	Q6P4D5	195 aa		10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778	CIART	Q8N365	385 aa	Predicted RBP	10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778	RAB24	Q969Q5	203 aa		10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778	ZFHX3	Q15911	3703 aa		10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778	FLNA	P21333	2647 aa	Known RBP	10.43	□□□□□ -0.74
NR1H3-215	ENST00000461778	IGKV1OR2-108	A0A075B7D4	117 aa		10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	BCL2	P10415	239 aa		10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	TAGLN2	P37802	199 aa	Known RBP	10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	CDC34	P49427	236 aa	Predicted RBP	10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	PPT1	P50897	306 aa		10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	FGF8	P55075	233 aa	Predicted RBP	10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	MMD	Q15546	238 aa		10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	HAGH	Q16775	308 aa		10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	SLC16A13	Q7RTY0	426 aa		10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	THAP8	Q8NA92	274 aa		10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	OR1P1	Q8NH06	330 aa		10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	C17orf50	Q8WW18	174 aa		10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	SRSF12	Q8WXF0	261 aa	Known RBP	10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	NKX6-2	Q9C056	277 aa	Predicted RBP	10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	CSPG4	Q6UVK1	2322 aa		10.42	□□□□□ -0.74
NR1H3-215	ENST00000461778	CENPVL3	A0A0U1RRI6	287 aa		10.41	□□□□□ -0.74
NR1H3-215	ENST00000461778	DNASE2	O00115	360 aa	Predicted RBP	10.41	□□□□□ -0.74
NR1H3-215	ENST00000461778	TSPAN9	O75954	239 aa		10.41	□□□□□ -0.74
NR1H3-215	ENST00000461778	SNAPIN	O95295	136 aa		10.41	□□□□□ -0.74
NR1H3-215	ENST00000461778	LY6G6D	O95868	133 aa		10.41	□□□□□ -0.74
NR1H3-215	ENST00000461778	AREG	P15514	252 aa		10.41	□□□□□ -0.74
NR1H3-215	ENST00000461778	MFAP2	P55001	183 aa		10.41	□□□□□ -0.74
NR1H3-215	ENST00000461778	B2M	P61769	119 aa		10.41	□□□□□ -0.74
NR1H3-215	ENST00000461778	FBLN7	Q53RD9	439 aa		10.41	□□□□□ -0.74
NR1H3-215	ENST00000461778	ETFRF1	Q6IPR1	90 aa		10.41	□□□□□ -0.74
NR1H3-215	ENST00000461778	RBMS3	Q6XE24	437 aa	Known RBP	10.41	□□□□□ -0.74
NR1H3-215	ENST00000461778	SLC35E3	Q7Z769	313 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms