RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 OR4D10Q8NGI6 311 aa10.42□□□□□ -0.74
USP4-206ENST00000461553 OR13C8Q8NGS7 320 aa10.42□□□□□ -0.74
USP4-206ENST00000461553 ABHD1Q96SE0 405 aa10.42□□□□□ -0.74
USP4-206ENST00000461553 TXN2Q99757 166 aa10.42□□□□□ -0.74
USP4-206ENST00000461553 UBQLN2Q9UHD9 624 aa10.42□□□□□ -0.74
USP4-206ENST00000461553 K7EMT4 169 aa10.41□□□□□ -0.74
USP4-206ENST00000461553 GNG7O60262 68 aa10.41□□□□□ -0.74
USP4-206ENST00000461553 YIF1AO95070 293 aa10.41□□□□□ -0.74
USP4-206ENST00000461553 IFNA17P01571 189 aa10.41□□□□□ -0.74
USP4-206ENST00000461553 IGKV1-5P01602 117 aa10.41□□□□□ -0.74
USP4-206ENST00000461553 FCGR2BP31994 310 aaPredicted RBP10.41□□□□□ -0.74
USP4-206ENST00000461553 SNCAP37840 140 aa10.41□□□□□ -0.74
USP4-206ENST00000461553 ALDH3B2P48448 385 aa10.41□□□□□ -0.74
USP4-206ENST00000461553 HOXA1P49639 335 aaPredicted RBP10.41□□□□□ -0.74
USP4-206ENST00000461553 MEF2DQ14814 521 aa10.41□□□□□ -0.74
USP4-206ENST00000461553 IZUMO4Q1ZYL8 232 aa10.41□□□□□ -0.74
USP4-206ENST00000461553 STEAP1BQ6NZ63 245 aa10.41□□□□□ -0.74
USP4-206ENST00000461553 TERB2Q8NHR7 220 aa10.41□□□□□ -0.74
USP4-206ENST00000461553 ENY2Q9NPA8 101 aa10.41□□□□□ -0.74
USP4-206ENST00000461553 C14orf166Q9Y224 244 aaKnown RBP10.41□□□□□ -0.74
USP4-206ENST00000461553 CORTO00230 105 aa10.4□□□□□ -0.74
USP4-206ENST00000461553 ST8SIA3O43173 380 aa10.4□□□□□ -0.74
USP4-206ENST00000461553 NOL3O60936 208 aaKnown RBP10.4□□□□□ -0.74
USP4-206ENST00000461553 B3GALNT1O75752 331 aa10.4□□□□□ -0.74
USP4-206ENST00000461553 CTSDP07339 412 aaPredicted RBP10.4□□□□□ -0.74
USP4-206ENST00000461553 CTSGP08311 255 aa10.4□□□□□ -0.74
USP4-206ENST00000461553 APOC4P55056 127 aa10.4□□□□□ -0.74
USP4-206ENST00000461553 SPCS2Q15005 226 aa10.4□□□□□ -0.74
USP4-206ENST00000461553 CLVS1Q8IUQ0 354 aaPredicted RBP10.4□□□□□ -0.74
USP4-206ENST00000461553 MARCH1Q8TCQ1 289 aa10.4□□□□□ -0.74
USP4-206ENST00000461553 RAB2BQ8WUD1 216 aa10.4□□□□□ -0.74
USP4-206ENST00000461553 SMIM4Q8WVI0 70 aa10.4□□□□□ -0.74
USP4-206ENST00000461553 RRNAD1Q96FB5 475 aaKnown RBP10.4□□□□□ -0.74
USP4-206ENST00000461553 GINS3Q9BRX5 216 aa10.4□□□□□ -0.74
USP4-206ENST00000461553 MIXL1Q9H2W2 232 aa10.4□□□□□ -0.74
USP4-206ENST00000461553 CCDC59Q9P031 241 aaKnown RBP10.4□□□□□ -0.74
USP4-206ENST00000461553 IGHV7-4-1A0A0J9YVY3 117 aa10.39□□□□□ -0.75
USP4-206ENST00000461553 DISC1C4P0D8 188 aa10.39□□□□□ -0.75
USP4-206ENST00000461553 P0C879 139 aa10.39□□□□□ -0.75
USP4-206ENST00000461553 UCP1P25874 307 aa10.39□□□□□ -0.75
USP4-206ENST00000461553 BMI1P35226 326 aa10.39□□□□□ -0.75
USP4-206ENST00000461553 NPBWR1P48145 328 aa10.39□□□□□ -0.75
USP4-206ENST00000461553 IL18Q14116 193 aa10.39□□□□□ -0.75
USP4-206ENST00000461553 ODF3L2Q3SX64 289 aa10.39□□□□□ -0.75
USP4-206ENST00000461553 FAAP20Q6NZ36 180 aa10.39□□□□□ -0.75
USP4-206ENST00000461553 TMEM116Q8NCL8 245 aa10.39□□□□□ -0.75
USP4-206ENST00000461553 DUSP18Q8NEJ0 188 aa10.39□□□□□ -0.75
USP4-206ENST00000461553 OR10C1Q96KK4 312 aa10.39□□□□□ -0.75
USP4-206ENST00000461553 NXF2Q9GZY0 626 aaKnown RBP10.39□□□□□ -0.75
USP4-206ENST00000461553 RABL2AQ9UBK7 228 aaPredicted RBP10.39□□□□□ -0.75
USP4-206ENST00000461553 RABL2BQ9UNT1 228 aa10.39□□□□□ -0.75
USP4-206ENST00000461553 HYDINQ4G0P3 5121 aa10.39□□□□□ -0.75
USP4-206ENST00000461553 A0A0B4J293 547 aa10.38□□□□□ -0.75
USP4-206ENST00000461553 INS-IGF2F8WCM5 200 aa10.38□□□□□ -0.75
USP4-206ENST00000461553 CTDSP2O14595 271 aa10.38□□□□□ -0.75
USP4-206ENST00000461553 SCGB2A1O75556 95 aa10.38□□□□□ -0.75
USP4-206ENST00000461553 IGHV3-48P01763 117 aa10.38□□□□□ -0.75
USP4-206ENST00000461553 AKAIN1P0CW23 69 aa10.38□□□□□ -0.75
USP4-206ENST00000461553 SUB1P53999 127 aaKnown RBP eCLIP10.38□□□□□ -0.75
USP4-206ENST00000461553 SURF2Q15527 256 aaPredicted RBP10.38□□□□□ -0.75
USP4-206ENST00000461553 SP6Q3SY56 376 aa10.38□□□□□ -0.75
USP4-206ENST00000461553 FAM219AQ8IW50 185 aa10.38□□□□□ -0.75
USP4-206ENST00000461553 DIRAS2Q96HU8 199 aa10.38□□□□□ -0.75
USP4-206ENST00000461553 RNF2Q99496 336 aa10.38□□□□□ -0.75
USP4-206ENST00000461553 BCL7BQ9BQE9 202 aa10.38□□□□□ -0.75
USP4-206ENST00000461553 RHPN1-AS1Q9BWJ2 59 aa10.38□□□□□ -0.75
USP4-206ENST00000461553 C6orf62Q9GZU0 229 aaPredicted RBP10.38□□□□□ -0.75
USP4-206ENST00000461553 SMPXQ9UHP9 88 aa10.38□□□□□ -0.75
USP4-206ENST00000461553 IGHV3-49A0A0A0MS15 119 aa10.37□□□□□ -0.75
USP4-206ENST00000461553 TRAV14DV4A0A0A6YYC5 116 aa10.37□□□□□ -0.75
USP4-206ENST00000461553 TEX13DA0A0J9YY54 714 aaPredicted RBP10.37□□□□□ -0.75
USP4-206ENST00000461553 CHEK1O14757 476 aa10.37□□□□□ -0.75
USP4-206ENST00000461553 JTBO76095 146 aa10.37□□□□□ -0.75
USP4-206ENST00000461553 OR5AC1P0C628 307 aa10.37□□□□□ -0.75
USP4-206ENST00000461553 OPRK1P41145 380 aa10.37□□□□□ -0.75
USP4-206ENST00000461553 DEFB135Q30KP9 77 aa10.37□□□□□ -0.75
USP4-206ENST00000461553 OR4C16Q8NGL9 310 aa10.37□□□□□ -0.75
USP4-206ENST00000461553 PRRT1Q99946 306 aa10.37□□□□□ -0.75
USP4-206ENST00000461553 OVOL2Q9BRP0 275 aa10.37□□□□□ -0.75
USP4-206ENST00000461553 TMEM222Q9H0R3 208 aa10.37□□□□□ -0.75
USP4-206ENST00000461553 NAA60Q9H7X0 242 aa10.37□□□□□ -0.75
USP4-206ENST00000461553 A0A0G2JRQ6 117 aa10.36□□□□□ -0.75
USP4-206ENST00000461553 CTDSPLO15194 276 aa10.36□□□□□ -0.75
USP4-206ENST00000461553 RNASE2P10153 161 aaKnown RBP10.36□□□□□ -0.75
USP4-206ENST00000461553 TMBIM6P55061 237 aa10.36□□□□□ -0.75
USP4-206ENST00000461553 ZNF600Q6ZNG1 722 aa10.36□□□□□ -0.75
USP4-206ENST00000461553 RBPMSQ93062 196 aaKnown RBP10.36□□□□□ -0.75
USP4-206ENST00000461553 ZNF414Q96IQ9 312 aa10.36□□□□□ -0.75
USP4-206ENST00000461553 TP53TG1Q9Y2A0 90 aa10.36□□□□□ -0.75
USP4-206ENST00000461553 IGKV3-7A0A075B6H7 116 aa10.35□□□□□ -0.75
USP4-206ENST00000461553 IGHV3OR16-13A0A075B7E8 117 aa10.35□□□□□ -0.75
USP4-206ENST00000461553 IGHV3-74A0A0B4J1X5 117 aa10.35□□□□□ -0.75
USP4-206ENST00000461553 KIR2DL5BA0A0G2JN68 375 aa10.35□□□□□ -0.75
USP4-206ENST00000461553 KIR2DL5BA0A0G2JPC4 375 aa10.35□□□□□ -0.75
USP4-206ENST00000461553 UBE2CO00762 179 aa10.35□□□□□ -0.75
USP4-206ENST00000461553 CD5P06127 495 aa10.35□□□□□ -0.75
USP4-206ENST00000461553 RPL35AP18077 110 aaKnown RBP10.35□□□□□ -0.75
USP4-206ENST00000461553 ETV6P41212 452 aa10.35□□□□□ -0.75
USP4-206ENST00000461553 TFPI2P48307 235 aa10.35□□□□□ -0.75
USP4-206ENST00000461553 DHODHQ02127 395 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms