RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 IZUMO1RA6ND01 250 aa11.65□□□□□ -0.54
VARS-219ENST00000461328 A8MWP6 167 aa11.65□□□□□ -0.54
VARS-219ENST00000461328 ETV6P41212 452 aa11.65□□□□□ -0.54
VARS-219ENST00000461328 SUB1P53999 127 aaKnown RBP eCLIP11.65□□□□□ -0.544e-6■■□□□ 11.8
VARS-219ENST00000461328 GUCA2BQ16661 112 aa11.65□□□□□ -0.54
VARS-219ENST00000461328 SPSB3Q6PJ21 355 aa11.65□□□□□ -0.54
VARS-219ENST00000461328 ADAMTSL5Q6ZMM2 481 aa11.65□□□□□ -0.54
VARS-219ENST00000461328 SRRQ9GZT4 340 aa11.65□□□□□ -0.54
VARS-219ENST00000461328 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.65□□□□□ -0.54
VARS-219ENST00000461328 GAR1Q9NY12 217 aaKnown RBP11.65□□□□□ -0.54
VARS-219ENST00000461328 TECRQ9NZ01 308 aaKnown RBP11.65□□□□□ -0.54
VARS-219ENST00000461328 PRR13Q9NZ81 148 aa11.65□□□□□ -0.54
VARS-219ENST00000461328 CACNG5Q9UF02 275 aa11.65□□□□□ -0.54
VARS-219ENST00000461328 SELENOKQ9Y6D0 94 aa11.65□□□□□ -0.54
VARS-219ENST00000461328 NUPL2O15504 423 aaKnown RBP11.64□□□□□ -0.55
VARS-219ENST00000461328 MT-CO2P00403 227 aa11.64□□□□□ -0.55
VARS-219ENST00000461328 CBLN1P23435 193 aa11.64□□□□□ -0.55
VARS-219ENST00000461328 MFAP4P55083 255 aa11.64□□□□□ -0.55
VARS-219ENST00000461328 TM4SF20Q53R12 229 aa11.64□□□□□ -0.55
VARS-219ENST00000461328 UNQ9165/PRO28630Q6UXU0 137 aa11.64□□□□□ -0.55
VARS-219ENST00000461328 UXS1Q8NBZ7 420 aa11.64□□□□□ -0.55
VARS-219ENST00000461328 DEDD2Q8WXF8 326 aa11.64□□□□□ -0.55
VARS-219ENST00000461328 GALNT14Q96FL9 552 aa11.64□□□□□ -0.55
VARS-219ENST00000461328 RCHY1Q96PM5 261 aa11.64□□□□□ -0.55
VARS-219ENST00000461328 ATP6V0BQ99437 205 aa11.64□□□□□ -0.55
VARS-219ENST00000461328 C20orf24Q9BUV8 137 aa11.64□□□□□ -0.55
VARS-219ENST00000461328 ZMAT4Q9H898 229 aa11.64□□□□□ -0.55
VARS-219ENST00000461328 CEBPZOSA8MTT3 80 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 I3L2K1 104 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 NXPH3O95157 252 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 IGHV3-48P01763 117 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 CD81P60033 236 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 SPCS3P61009 180 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 SRPXP78539 464 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 RELQ04864 619 aaPredicted RBP11.63□□□□□ -0.55
VARS-219ENST00000461328 TMEM187Q14656 261 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 DEFB114Q30KQ6 69 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 BTNL8Q6UX41 500 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 Q6ZRM9 215 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 LGI3Q8N145 548 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 TMEM190Q8WZ59 177 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 IL22RA2Q969J5 263 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 MARC2Q969Z3 335 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 GPR146Q96CH1 333 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 CHRDL1Q9BU40 450 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 ZNF436Q9C0F3 470 aaPredicted RBP11.63□□□□□ -0.55
VARS-219ENST00000461328 TMEM56-RWDD3S4R434 201 aa11.63□□□□□ -0.55
VARS-219ENST00000461328 A8MZ25 164 aa11.62□□□□□ -0.55
VARS-219ENST00000461328 INS-IGF2F8WCM5 200 aa11.62□□□□□ -0.55
VARS-219ENST00000461328 CORTO00230 105 aa11.62□□□□□ -0.55
VARS-219ENST00000461328 NDUFA4O00483 81 aa11.62□□□□□ -0.55
VARS-219ENST00000461328 GNG7O60262 68 aa11.62□□□□□ -0.55
VARS-219ENST00000461328 SULT1A3P0DMM9 295 aa11.62□□□□□ -0.55
VARS-219ENST00000461328 SULT1A4P0DMN0 295 aa11.62□□□□□ -0.55
VARS-219ENST00000461328 VAMP1P23763 118 aa11.62□□□□□ -0.55
VARS-219ENST00000461328 WDR89Q96FK6 387 aaPredicted RBP11.62□□□□□ -0.55
VARS-219ENST00000461328 SLC25A21Q9BQT8 299 aaPredicted RBP11.62□□□□□ -0.55
VARS-219ENST00000461328 TUBA4BQ9H853 241 aa11.62□□□□□ -0.55
VARS-219ENST00000461328 HEYLQ9NQ87 328 aaPredicted RBP11.62□□□□□ -0.55
VARS-219ENST00000461328 C19orf73Q9NVV2 129 aa11.62□□□□□ -0.55
VARS-219ENST00000461328 TENM3Q9P273 2699 aa11.62□□□□□ -0.55
VARS-219ENST00000461328 IGHV3OR16-8A0A075B7F1 116 aa11.61□□□□□ -0.55
VARS-219ENST00000461328 PIGBOS1A0A0B4J2F0 54 aa11.61□□□□□ -0.55
VARS-219ENST00000461328 LINC00854A0A1B0GVQ3 168 aa11.61□□□□□ -0.55
VARS-219ENST00000461328 F8W735 103 aaPredicted RBP11.61□□□□□ -0.55
VARS-219ENST00000461328 YIF1AO95070 293 aa11.61□□□□□ -0.55
VARS-219ENST00000461328 RNASE2P10153 161 aaKnown RBP11.61□□□□□ -0.55
VARS-219ENST00000461328 OPRK1P41145 380 aa11.61□□□□□ -0.55
VARS-219ENST00000461328 ELLP55199 621 aaPredicted RBP11.61□□□□□ -0.55
VARS-219ENST00000461328 SUPT4H1P63272 117 aaKnown RBP11.61□□□□□ -0.55
VARS-219ENST00000461328 DUSP18Q8NEJ0 188 aa11.61□□□□□ -0.55
VARS-219ENST00000461328 OR52E5Q8NH55 327 aa11.61□□□□□ -0.55
VARS-219ENST00000461328 TXN2Q99757 166 aa11.61□□□□□ -0.55
VARS-219ENST00000461328 DAZ1Q9NQZ3 744 aaKnown RBP11.61□□□□□ -0.55
VARS-219ENST00000461328 MLXQ9UH92 298 aa11.61□□□□□ -0.55
VARS-219ENST00000461328 A0A0B4J2A0 478 aa11.6□□□□□ -0.55
VARS-219ENST00000461328 ZNF207O43670 478 aaKnown RBP11.6□□□□□ -0.55
VARS-219ENST00000461328 SCAF4O95104 1147 aaKnown RBP11.6□□□□□ -0.55
VARS-219ENST00000461328 ADMP35318 185 aa11.6□□□□□ -0.55
VARS-219ENST00000461328 NPBWR1P48145 328 aa11.6□□□□□ -0.55
VARS-219ENST00000461328 RBMS2Q15434 407 aaKnown RBP11.6□□□□□ -0.55
VARS-219ENST00000461328 TMEM128Q5BJH2 165 aa11.6□□□□□ -0.55
VARS-219ENST00000461328 RBPMS2Q6ZRY4 209 aaKnown RBP11.6□□□□□ -0.55
VARS-219ENST00000461328 LYZL2Q7Z4W2 148 aa11.6□□□□□ -0.55
VARS-219ENST00000461328 TMEM61Q8N0U2 210 aa11.6□□□□□ -0.55
VARS-219ENST00000461328 CENPSQ8N2Z9 138 aa11.6□□□□□ -0.55
VARS-219ENST00000461328 NEURL2Q9BR09 285 aa11.6□□□□□ -0.55
VARS-219ENST00000461328 MRPL27Q9P0M9 148 aaKnown RBP11.6□□□□□ -0.55
VARS-219ENST00000461328 CACFD1Q9UGQ2 172 aa11.6□□□□□ -0.55
VARS-219ENST00000461328 SHPKQ9UHJ6 478 aa11.6□□□□□ -0.55
VARS-219ENST00000461328 NAP1L6A6NFF2 107 aa11.59□□□□□ -0.55
VARS-219ENST00000461328 CENPXA8MT69 81 aa11.59□□□□□ -0.55
VARS-219ENST00000461328 SCGB2A1O75556 95 aa11.59□□□□□ -0.55
VARS-219ENST00000461328 CTSGP08311 255 aa11.59□□□□□ -0.55
VARS-219ENST00000461328 HTR2BP41595 481 aa11.59□□□□□ -0.55
VARS-219ENST00000461328 CCR6P51684 374 aa11.59□□□□□ -0.55
VARS-219ENST00000461328 SMCO1Q147U7 214 aa11.59□□□□□ -0.55
VARS-219ENST00000461328 BAK1Q16611 211 aa11.59□□□□□ -0.55
VARS-219ENST00000461328 AARDQ4LEZ3 155 aa11.59□□□□□ -0.55
VARS-219ENST00000461328 SLC16A13Q7RTY0 426 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms