RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 FAM90A2PQ658T7 463 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 CYP2G1PQ6ZSU1 146 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 SSX7Q7RTT5 188 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 OR11H6Q8NGC7 330 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 RPEQ96AT9 228 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 MALSU1Q96EH3 234 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 SSBP3Q9BWW4 388 aaPredicted RBP11.4□□□□□ -0.58
ERCC3-205ENST00000460485 NAT8Q9UHE5 227 aa11.4□□□□□ -0.58
ERCC3-205ENST00000460485 PUS1Q9Y606 427 aaKnown RBP eCLIP11.4□□□□□ -0.58
ERCC3-205ENST00000460485 JMJD1CQ15652 2540 aa11.39□□□□□ -0.59
ERCC3-205ENST00000460485 FBP1P09467 338 aa11.39□□□□□ -0.59
ERCC3-205ENST00000460485 FGF8P55075 233 aaPredicted RBP11.39□□□□□ -0.59
ERCC3-205ENST00000460485 SELENOTP62341 195 aa11.39□□□□□ -0.59
ERCC3-205ENST00000460485 PRR20EP86478 221 aa11.39□□□□□ -0.59
ERCC3-205ENST00000460485 PRR20CP86479 221 aa11.39□□□□□ -0.59
ERCC3-205ENST00000460485 PRR20DP86480 221 aa11.39□□□□□ -0.59
ERCC3-205ENST00000460485 PRR20BP86481 221 aa11.39□□□□□ -0.59
ERCC3-205ENST00000460485 PRR20AP86496 221 aa11.39□□□□□ -0.59
ERCC3-205ENST00000460485 MALRD1Q5VYJ5 2156 aa11.39□□□□□ -0.59
ERCC3-205ENST00000460485 STPG3Q8N7X2 389 aa11.39□□□□□ -0.59
ERCC3-205ENST00000460485 C22orf15Q8WYQ4 148 aa11.39□□□□□ -0.59
ERCC3-205ENST00000460485 TMEM190Q8WZ59 177 aa11.39□□□□□ -0.59
ERCC3-205ENST00000460485 MRPL32Q9BYC8 188 aaKnown RBP11.39□□□□□ -0.59
ERCC3-205ENST00000460485 INSIG2Q9Y5U4 225 aa11.39□□□□□ -0.59
ERCC3-205ENST00000460485 AKAP6Q13023 2319 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 FLNAP21333 2647 aaKnown RBP11.38□□□□□ -0.59
ERCC3-205ENST00000460485 IGHV1-3A0A0C4DH29 117 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 COLCA2A8K830 154 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 ENSAO43768 121 aaKnown RBP11.38□□□□□ -0.59
ERCC3-205ENST00000460485 CLN5O75503 358 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 ACTL6BO94805 426 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 PRTN3P24158 256 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 GPR6P46095 362 aaPredicted RBP11.38□□□□□ -0.59
ERCC3-205ENST00000460485 EFNA4P52798 201 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 TAS2R45P59539 299 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 PVRIGQ6DKI7 326 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 CCDC144NLQ6NUI1 221 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 SLC16A13Q7RTY0 426 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 OR4P4Q8NGL7 312 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 MDFIQ99750 246 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 SSX3Q99909 188 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 ZNF430Q9H8G1 570 aaPredicted RBP11.38□□□□□ -0.59
ERCC3-205ENST00000460485 TMEM167BQ9NRX6 74 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 SLC45A2Q9UMX9 530 aa11.38□□□□□ -0.59
ERCC3-205ENST00000460485 LOC105371242A0A075B767 164 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 ZNF727A8MUV8 499 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 C1orf196B1AJZ1 125 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 LY6LH3BQJ8 138 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 YIF1AO95070 293 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 OR2C1O95371 312 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 SOD3P08294 240 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 HTR1DP28221 377 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 RPL27AP46776 148 aaKnown RBP11.37□□□□□ -0.59
ERCC3-205ENST00000460485 REG1BP48304 166 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 HABP2Q14520 560 aaPredicted RBP11.37□□□□□ -0.59
ERCC3-205ENST00000460485 PRSS8Q16651 343 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 MINOS1Q5TGZ0 78 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 OR1L6Q8NGR2 347 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 PFDN5Q99471 154 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 SMIM7Q9BQ49 75 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 SDF2L1Q9HCN8 221 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 ZNRD1Q9P1U0 126 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 DPM3Q9P2X0 92 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 ONECUT1Q9UBC0 465 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 MINOS1-NBL1R4GNA1 71 aa11.37□□□□□ -0.59
ERCC3-205ENST00000460485 NSD1Q96L73 2696 aaPredicted RBP11.37□□□□□ -0.59
ERCC3-205ENST00000460485 LYNX1G3V0Z9 82 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 SLC25A17O43808 307 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 CRYGBP07316 175 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 LYNX1P0DP58 116 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 CEBPGP53567 150 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 BPIFB3P59826 476 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 CD81P60033 236 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 TPTE2P1Q5T6R2 138 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 MIC13Q5XKP0 118 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 PQLC2Q6ZP29 291 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 C1QL4Q86Z23 238 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 THAP8Q8NA92 274 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 GATAD1Q8WUU5 269 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 HIST1H2BAQ96A08 127 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 BTF3L4Q96K17 158 aa11.36□□□□□ -0.59
ERCC3-205ENST00000460485 ODF3BA8MYP8 253 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 C11orf94C9JXX5 98 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 OPN1MWP04001 364 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 OPN1MW2P0DN77 364 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 OPN1MW3P0DN78 364 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 TMEM241Q24JQ0 296 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 AKIRIN2Q53H80 203 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 MOB3BQ86TA1 216 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 OR1L4Q8NGR5 311 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 OR4F5Q8NH21 305 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 ANAPC16Q96DE5 110 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 OR4F4Q96R69 305 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 BIN3Q9NQY0 253 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 TECRQ9NZ01 308 aaKnown RBP11.35□□□□□ -0.59
ERCC3-205ENST00000460485 DOK5Q9P104 306 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 FUT9Q9Y231 359 aa11.35□□□□□ -0.59
ERCC3-205ENST00000460485 VPS13CQ709C8 3753 aa11.34□□□□□ -0.59
ERCC3-205ENST00000460485 COL6A5A8TX70 2615 aa11.34□□□□□ -0.59
ERCC3-205ENST00000460485 C22orf46C9J442 243 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms