RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 CADM3Q8N126 398 aa11.28□□□□□ -0.6
CROCCP4-201ENST00000457096 LILRB2Q8N423 598 aa11.28□□□□□ -0.6
CROCCP4-201ENST00000457096 TMEM116Q8NCL8 245 aa11.28□□□□□ -0.6
CROCCP4-201ENST00000457096 OR4D10Q8NGI6 311 aa11.28□□□□□ -0.6
CROCCP4-201ENST00000457096 OR52I2Q8NH67 350 aa11.28□□□□□ -0.6
CROCCP4-201ENST00000457096 SCPEP1Q9HB40 452 aa11.28□□□□□ -0.6
CROCCP4-201ENST00000457096 RSL24D1Q9UHA3 163 aaKnown RBP11.28□□□□□ -0.6
CROCCP4-201ENST00000457096 A0A0G2JRQ6 117 aa11.27□□□□□ -0.61
CROCCP4-201ENST00000457096 C15orf62A8K5M9 175 aa11.27□□□□□ -0.61
CROCCP4-201ENST00000457096 NUPL2O15504 423 aaKnown RBP11.27□□□□□ -0.61
CROCCP4-201ENST00000457096 RGS5O15539 181 aa11.27□□□□□ -0.61
CROCCP4-201ENST00000457096 CD3DP04234 171 aa11.27□□□□□ -0.61
CROCCP4-201ENST00000457096 PPP5CP53041 499 aa11.27□□□□□ -0.61
CROCCP4-201ENST00000457096 APOC4P55056 127 aa11.27□□□□□ -0.61
CROCCP4-201ENST00000457096 MFAP4P55083 255 aa11.27□□□□□ -0.61
CROCCP4-201ENST00000457096 UCP3P55916 312 aa11.27□□□□□ -0.61
CROCCP4-201ENST00000457096 HSPE1P61604 102 aaKnown RBP11.27□□□□□ -0.61
CROCCP4-201ENST00000457096 WFDC3Q8IUB2 231 aa11.27□□□□□ -0.61
CROCCP4-201ENST00000457096 CMTM3Q96MX0 182 aa11.27□□□□□ -0.61
CROCCP4-201ENST00000457096 TSC22D3Q99576 134 aa11.27□□□□□ -0.61
CROCCP4-201ENST00000457096 A0A0B4J293 547 aa11.26□□□□□ -0.61
CROCCP4-201ENST00000457096 OR4C46A6NHA9 309 aa11.26□□□□□ -0.61
CROCCP4-201ENST00000457096 PIGPP57054 158 aa11.26□□□□□ -0.61
CROCCP4-201ENST00000457096 TNFRSF9Q07011 255 aa11.26□□□□□ -0.61
CROCCP4-201ENST00000457096 LPCAT3Q6P1A2 487 aa11.26□□□□□ -0.61
CROCCP4-201ENST00000457096 DYNC2LI1Q8TCX1 351 aa11.26□□□□□ -0.61
CROCCP4-201ENST00000457096 ABHD1Q96SE0 405 aa11.26□□□□□ -0.61
CROCCP4-201ENST00000457096 NXF2Q9GZY0 626 aaKnown RBP11.26□□□□□ -0.61
CROCCP4-201ENST00000457096 MAP6D1Q9H9H5 199 aa11.26□□□□□ -0.61
CROCCP4-201ENST00000457096 CCDC59Q9P031 241 aaKnown RBP11.26□□□□□ -0.61
CROCCP4-201ENST00000457096 MRPL36Q9P0J6 103 aaKnown RBP11.26□□□□□ -0.61
CROCCP4-201ENST00000457096 ST8SIA3O43173 380 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 GNG7O60262 68 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 LY6G6CO95867 125 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 P0C879 139 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 S100GP29377 79 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 RELQ04864 619 aaPredicted RBP11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 MLANAQ16655 118 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 FAAP20Q6NZ36 180 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 TOMM20LQ6UXN7 152 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 Q6ZWC4 215 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 LHFPL1Q86WI0 220 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 FAM24BQ8N5W8 94 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 STPG3Q8N7X2 389 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 ZNF114Q8NC26 417 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 LINC00476Q8WZB0 136 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 ST8SIA2Q92186 375 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 RNF183Q96D59 192 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 OR10C1Q96KK4 312 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 ATP6V0BQ99437 205 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 RBM38Q9H0Z9 239 aaKnown RBP11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 MIXL1Q9H2W2 232 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 FAM212BQ9NTI7 297 aaPredicted RBP11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 NDUFA13Q9P0J0 144 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 EXTL2Q9UBQ6 330 aa11.25□□□□□ -0.61
CROCCP4-201ENST00000457096 BMI1P35226 326 aa11.24□□□□□ -0.61
CROCCP4-201ENST00000457096 ETV6P41212 452 aa11.24□□□□□ -0.61
CROCCP4-201ENST00000457096 RNASE10Q5GAN6 216 aaKnown RBP11.24□□□□□ -0.61
CROCCP4-201ENST00000457096 FAM90A2PQ658T7 463 aa11.24□□□□□ -0.61
CROCCP4-201ENST00000457096 TCF24Q7RTU0 167 aa11.24□□□□□ -0.61
CROCCP4-201ENST00000457096 C6orf62Q9GZU0 229 aaPredicted RBP11.24□□□□□ -0.61
CROCCP4-201ENST00000457096 TP53TG1Q9Y2A0 90 aa11.24□□□□□ -0.61
CROCCP4-201ENST00000457096 TRAV14DV4A0A0A6YYC5 116 aa11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 A0A1B0GU03 582 aa11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 ZNF701M0R085 212 aaPredicted RBP11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 RNASE2P10153 161 aaKnown RBP11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 AKR1C2P52895 323 aa11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 RND3P61587 244 aa11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 ERHP84090 104 aaKnown RBP11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 SCGB2B2Q4G0G5 96 aa11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 SLC35G3Q8N808 338 aa11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 OR13C8Q8NGS7 320 aa11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 MCFD2Q8NI22 146 aa11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 GALNT14Q96FL9 552 aa11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 FNDC4Q9H6D8 234 aaPredicted RBP11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 ZFAND3Q9H8U3 227 aa11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 PUS1Q9Y606 427 aaKnown RBP eCLIP11.23□□□□□ -0.61
CROCCP4-201ENST00000457096 KIR2DL5BA0A0G2JN68 375 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 KIR2DL5BA0A0G2JPC4 375 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 C3orf85A0A1B0GTC6 90 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 UBE2CO00762 179 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 CTDSP2O14595 271 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 DFFBO76075 338 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 IFNA17P01571 189 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 TRIM16LQ309B1 348 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 LEMD1Q68G75 181 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 CEMP1Q6PRD7 247 aaPredicted RBP11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 Q6ZRM9 215 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 KIR2DL5AQ8N109 375 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 KIR2DL5BQ8NHK3 375 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 MARCH1Q8TCQ1 289 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 TXN2Q99757 166 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 MTFP1Q9UDX5 166 aa11.22□□□□□ -0.61
CROCCP4-201ENST00000457096 DEFB4AO15263 64 aa11.21□□□□□ -0.61
CROCCP4-201ENST00000457096 TMEM50AO95807 157 aa11.21□□□□□ -0.61
CROCCP4-201ENST00000457096 HOXA1P49639 335 aaPredicted RBP11.21□□□□□ -0.61
CROCCP4-201ENST00000457096 LHFPL5Q8TAF8 219 aa11.21□□□□□ -0.61
CROCCP4-201ENST00000457096 SLIRPQ9GZT3 109 aaKnown RBP11.21□□□□□ -0.61
CROCCP4-201ENST00000457096 MS4A6AQ9H2W1 248 aa11.21□□□□□ -0.61
CROCCP4-201ENST00000457096 KMT2AQ03164 3969 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms