RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ZC4H2Q9NQZ6 224 aa17.62■□□□□ 0.41
CBX3-204ENST00000456948 NAP1L6A6NFF2 107 aa17.61■□□□□ 0.41
CBX3-204ENST00000456948 CENPXA8MT69 81 aa17.61■□□□□ 0.41
CBX3-204ENST00000456948 CBLN1P23435 193 aa17.61■□□□□ 0.41
CBX3-204ENST00000456948 MFAP2P55001 183 aa17.61■□□□□ 0.41
CBX3-204ENST00000456948 ELLP55199 621 aaPredicted RBP17.61■□□□□ 0.41
CBX3-204ENST00000456948 TMEM128Q5BJH2 165 aa17.61■□□□□ 0.41
CBX3-204ENST00000456948 IGHV3-21A0A0B4J1V1 117 aa17.6■□□□□ 0.41
CBX3-204ENST00000456948 A8MWP6 167 aa17.6■□□□□ 0.41
CBX3-204ENST00000456948 K7EIM0 57 aa17.6■□□□□ 0.41
CBX3-204ENST00000456948 NUPL2O15504 423 aaKnown RBP17.6■□□□□ 0.41
CBX3-204ENST00000456948 RELQ04864 619 aaPredicted RBP17.6■□□□□ 0.41
CBX3-204ENST00000456948 TMEM187Q14656 261 aa17.6■□□□□ 0.41
CBX3-204ENST00000456948 SPINK9Q5DT21 86 aa17.6■□□□□ 0.41
CBX3-204ENST00000456948 PINX1Q96BK5 328 aaKnown RBP17.6■□□□□ 0.41
CBX3-204ENST00000456948 CACNG5Q9UF02 275 aa17.6■□□□□ 0.41
CBX3-204ENST00000456948 A0A0B4J2A0 478 aa17.59■□□□□ 0.41
CBX3-204ENST00000456948 SCGB2A1O75556 95 aa17.59■□□□□ 0.41
CBX3-204ENST00000456948 SULT1A3P0DMM9 295 aa17.59■□□□□ 0.41
CBX3-204ENST00000456948 SULT1A4P0DMN0 295 aa17.59■□□□□ 0.41
CBX3-204ENST00000456948 DUSP18Q8NEJ0 188 aa17.59■□□□□ 0.41
CBX3-204ENST00000456948 LHFPL5Q8TAF8 219 aa17.59■□□□□ 0.41
CBX3-204ENST00000456948 TMEM230Q96A57 120 aa17.59■□□□□ 0.41
CBX3-204ENST00000456948 SHPKQ9UHJ6 478 aa17.59■□□□□ 0.41
CBX3-204ENST00000456948 NDUFA4O00483 81 aa17.58■□□□□ 0.4
CBX3-204ENST00000456948 MT-CO2P00403 227 aa17.58■□□□□ 0.4
CBX3-204ENST00000456948 FCGR2BP31994 310 aaPredicted RBP17.58■□□□□ 0.4
CBX3-204ENST00000456948 NPBWR1P48145 328 aa17.58■□□□□ 0.4
CBX3-204ENST00000456948 RBMS2Q15434 407 aaKnown RBP17.58■□□□□ 0.4
CBX3-204ENST00000456948 DEFB114Q30KQ6 69 aa17.58■□□□□ 0.4
CBX3-204ENST00000456948 AARDQ4LEZ3 155 aa17.58■□□□□ 0.4
CBX3-204ENST00000456948 NOXA1Q86UR1 476 aa17.58■□□□□ 0.4
CBX3-204ENST00000456948 GPR146Q96CH1 333 aa17.58■□□□□ 0.4
CBX3-204ENST00000456948 ZNF436Q9C0F3 470 aaPredicted RBP17.58■□□□□ 0.4
CBX3-204ENST00000456948 HEYLQ9NQ87 328 aaPredicted RBP17.58■□□□□ 0.4
CBX3-204ENST00000456948 MRPL27Q9P0M9 148 aaKnown RBP17.58■□□□□ 0.4
CBX3-204ENST00000456948 A0A0G2JRQ6 117 aa17.57■□□□□ 0.4
CBX3-204ENST00000456948 CEBPZOSA8MTT3 80 aa17.57■□□□□ 0.4
CBX3-204ENST00000456948 I3L2K1 104 aa17.57■□□□□ 0.4
CBX3-204ENST00000456948 HTR2BP41595 481 aa17.57■□□□□ 0.4
CBX3-204ENST00000456948 CCR6P51684 374 aa17.57■□□□□ 0.4
CBX3-204ENST00000456948 CD300EQ496F6 205 aaPredicted RBP17.57■□□□□ 0.4
CBX3-204ENST00000456948 Q6ZRM9 215 aa17.57■□□□□ 0.4
CBX3-204ENST00000456948 UXS1Q8NBZ7 420 aa17.57■□□□□ 0.4
CBX3-204ENST00000456948 HIPK2Q9H2X6 1198 aa17.57■□□□□ 0.4
CBX3-204ENST00000456948 IGHV3-35A0A0C4DH35 117 aa17.56■□□□□ 0.4
CBX3-204ENST00000456948 DUXBA0A1W2PPF3 345 aa17.56■□□□□ 0.4
CBX3-204ENST00000456948 GNG7O60262 68 aa17.56■□□□□ 0.4
CBX3-204ENST00000456948 VAMP1P23763 118 aa17.56■□□□□ 0.4
CBX3-204ENST00000456948 CENPSQ8N2Z9 138 aa17.56■□□□□ 0.4
CBX3-204ENST00000456948 C7orf50Q9BRJ6 194 aaKnown RBP17.56■□□□□ 0.4
CBX3-204ENST00000456948 DAZ1Q9NQZ3 744 aaKnown RBP17.56■□□□□ 0.4
CBX3-204ENST00000456948 TMEM213A2RRL7 107 aa17.55■□□□□ 0.4
CBX3-204ENST00000456948 SUPT4H1P63272 117 aaKnown RBP17.55■□□□□ 0.4
CBX3-204ENST00000456948 SMCO1Q147U7 214 aa17.55■□□□□ 0.4
CBX3-204ENST00000456948 GUCA2BQ16661 112 aa17.55■□□□□ 0.4
CBX3-204ENST00000456948 ANKRD55Q3KP44 614 aa17.55■□□□□ 0.4
CBX3-204ENST00000456948 TM4SF20Q53R12 229 aa17.55■□□□□ 0.4
CBX3-204ENST00000456948 TMEM190Q8WZ59 177 aa17.55■□□□□ 0.4
CBX3-204ENST00000456948 C20orf24Q9BUV8 137 aa17.55■□□□□ 0.4
CBX3-204ENST00000456948 RPS10-NUDT3A0A1W2PQS6 291 aa17.54■□□□□ 0.4
CBX3-204ENST00000456948 CTSGP08311 255 aa17.54■□□□□ 0.4
CBX3-204ENST00000456948 UBE2MP61081 183 aaKnown RBP17.54■□□□□ 0.4
CBX3-204ENST00000456948 BAK1Q16611 211 aa17.54■□□□□ 0.4
CBX3-204ENST00000456948 UNQ9165/PRO28630Q6UXU0 137 aa17.54■□□□□ 0.4
CBX3-204ENST00000456948 ADAMTSL5Q6ZMM2 481 aa17.54■□□□□ 0.4
CBX3-204ENST00000456948 RBPMS2Q6ZRY4 209 aaKnown RBP17.54■□□□□ 0.4
CBX3-204ENST00000456948 TUBA4BQ9H853 241 aa17.54■□□□□ 0.4
CBX3-204ENST00000456948 A0A1B0GU03 582 aa17.53■□□□□ 0.4
CBX3-204ENST00000456948 K7EMT4 169 aa17.53■□□□□ 0.4
CBX3-204ENST00000456948 YIF1AO95070 293 aa17.53■□□□□ 0.4
CBX3-204ENST00000456948 RNASE2P10153 161 aaKnown RBP17.53■□□□□ 0.4
CBX3-204ENST00000456948 OPRK1P41145 380 aa17.53■□□□□ 0.4
CBX3-204ENST00000456948 CNPY1Q3B7I2 92 aa17.53■□□□□ 0.4
CBX3-204ENST00000456948 LAMTOR1Q6IAA8 161 aa17.53■□□□□ 0.4
CBX3-204ENST00000456948 LYZL2Q7Z4W2 148 aa17.53■□□□□ 0.4
CBX3-204ENST00000456948 CHRDL1Q9BU40 450 aa17.53■□□□□ 0.4
CBX3-204ENST00000456948 TRAV25A0A0B4J276 109 aa17.52■□□□□ 0.4
CBX3-204ENST00000456948 C15orf62A8K5M9 175 aa17.52■□□□□ 0.4
CBX3-204ENST00000456948 C8orf88P0DMB2 117 aa17.52■□□□□ 0.4
CBX3-204ENST00000456948 LINC00299Q6ZSB3 139 aa17.52■□□□□ 0.4
CBX3-204ENST00000456948 SLC16A13Q7RTY0 426 aa17.52■□□□□ 0.4
CBX3-204ENST00000456948 Q8N1Y9 231 aa17.52■□□□□ 0.4
CBX3-204ENST00000456948 OR1S1Q8NH92 325 aa17.52■□□□□ 0.4
CBX3-204ENST00000456948 CACNG8Q8WXS5 425 aa17.52■□□□□ 0.4
CBX3-204ENST00000456948 PRR13Q9NZ81 148 aa17.52■□□□□ 0.4
CBX3-204ENST00000456948 LINC00854A0A1B0GVQ3 168 aa17.51■□□□□ 0.39
CBX3-204ENST00000456948 IZUMO1RA6ND01 250 aa17.51■□□□□ 0.39
CBX3-204ENST00000456948 A8MZ25 164 aa17.51■□□□□ 0.39
CBX3-204ENST00000456948 F8W735 103 aaPredicted RBP17.51■□□□□ 0.39
CBX3-204ENST00000456948 SFT2D2O95562 160 aa17.51■□□□□ 0.39
CBX3-204ENST00000456948 FRMD6-AS1P0C7T7 363 aa17.51■□□□□ 0.39
CBX3-204ENST00000456948 IGHV4-30-4P0DP06 118 aa17.51■□□□□ 0.39
CBX3-204ENST00000456948 ADMP35318 185 aa17.51■□□□□ 0.39
CBX3-204ENST00000456948 CD81P60033 236 aa17.51■□□□□ 0.39
CBX3-204ENST00000456948 NMSQ5H8A3 153 aa17.51■□□□□ 0.39
CBX3-204ENST00000456948 PVRIGQ6DKI7 326 aa17.51■□□□□ 0.39
CBX3-204ENST00000456948 C11orf87Q6NUJ2 197 aa17.51■□□□□ 0.39
CBX3-204ENST00000456948 ASCL2Q99929 193 aa17.51■□□□□ 0.39
CBX3-204ENST00000456948 TMED3Q9Y3Q3 217 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms