RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 MRPL27Q9P0M9 148 aaKnown RBP12.23□□□□□ -0.45
CPSF6-203ENST00000456847 GPR132Q9UNW8 380 aa12.23□□□□□ -0.45
CPSF6-203ENST00000456847 A0A0B4J293 547 aa12.22□□□□□ -0.45
CPSF6-203ENST00000456847 A0A0G2JRQ6 117 aa12.22□□□□□ -0.45
CPSF6-203ENST00000456847 NDUFA4O00483 81 aa12.22□□□□□ -0.45
CPSF6-203ENST00000456847 NUPL2O15504 423 aaKnown RBP12.22□□□□□ -0.45
CPSF6-203ENST00000456847 SCAF4O95104 1147 aaKnown RBP12.22□□□□□ -0.45
CPSF6-203ENST00000456847 MT-CO2P00403 227 aa12.22□□□□□ -0.45
CPSF6-203ENST00000456847 PYDC2Q56P42 97 aa12.22□□□□□ -0.45
CPSF6-203ENST00000456847 SCGB3A2Q96PL1 93 aa12.22□□□□□ -0.45
CPSF6-203ENST00000456847 CRYM-AS1A6NIL9 109 aa12.21□□□□□ -0.45
CPSF6-203ENST00000456847 F8W735 103 aaPredicted RBP12.21□□□□□ -0.45
CPSF6-203ENST00000456847 I3L2K1 104 aa12.21□□□□□ -0.45
CPSF6-203ENST00000456847 FAUP35544 74 aaKnown RBP12.21□□□□□ -0.45
CPSF6-203ENST00000456847 RBPMS2Q6ZRY4 209 aaKnown RBP12.21□□□□□ -0.45
CPSF6-203ENST00000456847 SLC16A13Q7RTY0 426 aa12.21□□□□□ -0.45
CPSF6-203ENST00000456847 FAM219AQ8IW50 185 aa12.21□□□□□ -0.45
CPSF6-203ENST00000456847 OR52B4Q8NGK2 314 aa12.21□□□□□ -0.45
CPSF6-203ENST00000456847 RBPMSQ93062 196 aaKnown RBP12.21□□□□□ -0.45
CPSF6-203ENST00000456847 SOSTQ9BQB4 213 aa12.21□□□□□ -0.45
CPSF6-203ENST00000456847 TM2D3Q9BRN9 247 aa12.21□□□□□ -0.45
CPSF6-203ENST00000456847 DAZ1Q9NQZ3 744 aaKnown RBP12.21□□□□□ -0.45
CPSF6-203ENST00000456847 IGHV3OR16-8A0A075B7F1 116 aa12.21□□□□□ -0.46
CPSF6-203ENST00000456847 IGHV3-48P01763 117 aa12.21□□□□□ -0.46
CPSF6-203ENST00000456847 ETV6P41212 452 aa12.21□□□□□ -0.46
CPSF6-203ENST00000456847 SUB1P53999 127 aaKnown RBP eCLIP12.21□□□□□ -0.461e-8■■■■■ 40.1
CPSF6-203ENST00000456847 RELQ04864 619 aaPredicted RBP12.21□□□□□ -0.46
CPSF6-203ENST00000456847 TMEM268Q5VZI3 342 aa12.21□□□□□ -0.46
CPSF6-203ENST00000456847 DEFB125Q8N687 156 aa12.21□□□□□ -0.46
CPSF6-203ENST00000456847 GLYATL2Q8WU03 294 aa12.21□□□□□ -0.46
CPSF6-203ENST00000456847 WFDC10AQ9H1F0 79 aa12.21□□□□□ -0.46
CPSF6-203ENST00000456847 SRD5A3Q9H8P0 318 aa12.21□□□□□ -0.46
CPSF6-203ENST00000456847 OR11H12B2RN74 326 aa12.2□□□□□ -0.46
CPSF6-203ENST00000456847 ZNF207O43670 478 aaKnown RBP12.2□□□□□ -0.46
CPSF6-203ENST00000456847 GNG7O60262 68 aa12.2□□□□□ -0.46
CPSF6-203ENST00000456847 CDS2O95674 445 aa12.2□□□□□ -0.46
CPSF6-203ENST00000456847 C8orf88P0DMB2 117 aa12.2□□□□□ -0.46
CPSF6-203ENST00000456847 ADMP35318 185 aa12.2□□□□□ -0.46
CPSF6-203ENST00000456847 SELENOHQ8IZQ5 122 aaKnown RBP12.2□□□□□ -0.46
CPSF6-203ENST00000456847 LHFPL5Q8TAF8 219 aa12.2□□□□□ -0.46
CPSF6-203ENST00000456847 TXN2Q99757 166 aa12.2□□□□□ -0.46
CPSF6-203ENST00000456847 SPATA25Q9BR10 227 aa12.2□□□□□ -0.46
CPSF6-203ENST00000456847 AP3S2P59780 193 aa12.19□□□□□ -0.46
CPSF6-203ENST00000456847 HAGHQ16775 308 aa12.19□□□□□ -0.46
CPSF6-203ENST00000456847 ANKRD55Q3KP44 614 aa12.19□□□□□ -0.46
CPSF6-203ENST00000456847 KCNIP3Q9Y2W7 256 aa12.19□□□□□ -0.46
CPSF6-203ENST00000456847 TRAV25A0A0B4J276 109 aa12.19□□□□□ -0.46
CPSF6-203ENST00000456847 CORTO00230 105 aa12.19□□□□□ -0.46
CPSF6-203ENST00000456847 YIF1AO95070 293 aa12.19□□□□□ -0.46
CPSF6-203ENST00000456847 CTSGP08311 255 aa12.19□□□□□ -0.46
CPSF6-203ENST00000456847 TOMM5Q8N4H5 51 aa12.19□□□□□ -0.46
CPSF6-203ENST00000456847 RBM38Q9H0Z9 239 aaKnown RBP12.19□□□□□ -0.46
CPSF6-203ENST00000456847 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.19□□□□□ -0.46
CPSF6-203ENST00000456847 CACNG5Q9UF02 275 aa12.19□□□□□ -0.46
CPSF6-203ENST00000456847 INS-IGF2F8WCM5 200 aa12.18□□□□□ -0.46
CPSF6-203ENST00000456847 AKR1C4P17516 323 aa12.18□□□□□ -0.46
CPSF6-203ENST00000456847 FCGR2BP31994 310 aaPredicted RBP12.18□□□□□ -0.46
CPSF6-203ENST00000456847 Q6ZRM9 215 aa12.18□□□□□ -0.46
CPSF6-203ENST00000456847 DUSP18Q8NEJ0 188 aa12.18□□□□□ -0.46
CPSF6-203ENST00000456847 V9GYH0 126 aa12.18□□□□□ -0.46
CPSF6-203ENST00000456847 HUWE1Q7Z6Z7 4374 aaKnown RBP12.18□□□□□ -0.46
CPSF6-203ENST00000456847 RNASE2P10153 161 aaKnown RBP12.17□□□□□ -0.46
CPSF6-203ENST00000456847 NPBWR1P48145 328 aa12.17□□□□□ -0.46
CPSF6-203ENST00000456847 SPCS3P61009 180 aa12.17□□□□□ -0.46
CPSF6-203ENST00000456847 KLF9Q13886 244 aaPredicted RBP12.17□□□□□ -0.46
CPSF6-203ENST00000456847 LAMTOR1Q6IAA8 161 aa12.17□□□□□ -0.46
CPSF6-203ENST00000456847 TRIM63Q969Q1 353 aa12.17□□□□□ -0.46
CPSF6-203ENST00000456847 TMEM230Q96A57 120 aa12.17□□□□□ -0.46
CPSF6-203ENST00000456847 GPR146Q96CH1 333 aa12.17□□□□□ -0.46
CPSF6-203ENST00000456847 PRR13Q9NZ81 148 aa12.17□□□□□ -0.46
CPSF6-203ENST00000456847 C15orf62A8K5M9 175 aa12.17□□□□□ -0.46
CPSF6-203ENST00000456847 K7EMT4 169 aa12.17□□□□□ -0.46
CPSF6-203ENST00000456847 ANXA3P12429 323 aa12.17□□□□□ -0.46
CPSF6-203ENST00000456847 OPRK1P41145 380 aa12.17□□□□□ -0.46
CPSF6-203ENST00000456847 CEBPZOSA8MTT3 80 aa12.16□□□□□ -0.46
CPSF6-203ENST00000456847 ZNF701M0R085 212 aaPredicted RBP12.16□□□□□ -0.46
CPSF6-203ENST00000456847 NXPH3O95157 252 aa12.16□□□□□ -0.46
CPSF6-203ENST00000456847 TMEM187Q14656 261 aa12.16□□□□□ -0.46
CPSF6-203ENST00000456847 IL22RA2Q969J5 263 aa12.16□□□□□ -0.46
CPSF6-203ENST00000456847 GALNT14Q96FL9 552 aa12.16□□□□□ -0.46
CPSF6-203ENST00000456847 SPAG8Q99932 426 aaPredicted RBP12.16□□□□□ -0.46
CPSF6-203ENST00000456847 HEYLQ9NQ87 328 aaPredicted RBP12.16□□□□□ -0.46
CPSF6-203ENST00000456847 TMEM56-RWDD3S4R434 201 aa12.16□□□□□ -0.46
CPSF6-203ENST00000456847 ZNF79Q15937 498 aa12.15□□□□□ -0.46
CPSF6-203ENST00000456847 SPANXN2Q5MJ10 180 aa12.15□□□□□ -0.46
CPSF6-203ENST00000456847 TMED4Q7Z7H5 227 aa12.15□□□□□ -0.46
CPSF6-203ENST00000456847 OR52E5Q8NH55 327 aa12.15□□□□□ -0.46
CPSF6-203ENST00000456847 RBMY1BA6NDE4 496 aaKnown RBP12.15□□□□□ -0.46
CPSF6-203ENST00000456847 RBMY1EA6NEQ0 496 aaKnown RBP12.15□□□□□ -0.46
CPSF6-203ENST00000456847 C3orf84H3BNL1 204 aa12.15□□□□□ -0.46
CPSF6-203ENST00000456847 RBMY1DP0C7P1 496 aaKnown RBP12.15□□□□□ -0.46
CPSF6-203ENST00000456847 SULT1A3P0DMM9 295 aa12.15□□□□□ -0.46
CPSF6-203ENST00000456847 SULT1A4P0DMN0 295 aa12.15□□□□□ -0.46
CPSF6-203ENST00000456847 CCDC190Q86UF4 302 aa12.15□□□□□ -0.46
CPSF6-203ENST00000456847 MUC7Q8TAX7 377 aa12.15□□□□□ -0.46
CPSF6-203ENST00000456847 GINS3Q9BRX5 216 aa12.15□□□□□ -0.46
CPSF6-203ENST00000456847 RETNQ9HD89 108 aa12.15□□□□□ -0.46
CPSF6-203ENST00000456847 IGHV3-49A0A0A0MS15 119 aa12.14□□□□□ -0.47
CPSF6-203ENST00000456847 IGHV7-4-1A0A0J9YVY3 117 aa12.14□□□□□ -0.47
CPSF6-203ENST00000456847 TSPAN4O14817 238 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms