RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 MAJINQ3KP22 176 aa10.13□□□□□ -0.79
LINC00959-201ENST00000456581 ATOH7Q8N100 152 aa10.13□□□□□ -0.79
LINC00959-201ENST00000456581 OR1L6Q8NGR2 347 aa10.13□□□□□ -0.79
LINC00959-201ENST00000456581 TMEM208Q9BTX3 173 aa10.13□□□□□ -0.79
LINC00959-201ENST00000456581 CFAP46Q8IYW2 2715 aa10.13□□□□□ -0.79
LINC00959-201ENST00000456581 ADH4P08319 380 aa10.13□□□□□ -0.79
LINC00959-201ENST00000456581 SFTPCP11686 197 aa10.13□□□□□ -0.79
LINC00959-201ENST00000456581 FOXL1Q12952 345 aa10.13□□□□□ -0.79
LINC00959-201ENST00000456581 JKAMPQ9P055 326 aa10.13□□□□□ -0.79
LINC00959-201ENST00000456581 IL19Q9UHD0 177 aa10.13□□□□□ -0.79
LINC00959-201ENST00000456581 FBXL7Q9UJT9 491 aa10.13□□□□□ -0.79
LINC00959-201ENST00000456581 IGKV1OR2-108A0A075B7D4 117 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 SAA2-SAA4A0A096LPE2 208 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 KIR2DL5BA0A0G2JN68 375 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 KIR2DL5BA0A0G2JPC4 375 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 M0R143 59 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 FCN1O00602 326 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 CXorf1O96002 111 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 SAA2P0DJI9 122 aaPredicted RBP10.12□□□□□ -0.79
LINC00959-201ENST00000456581 CRYBB3P26998 211 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 HTD2P86397 168 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 KIR2DL5AQ8N109 375 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 ZCCHC14Q8WYQ9 949 aaKnown RBP10.12□□□□□ -0.79
LINC00959-201ENST00000456581 RND1Q92730 232 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 S1PR3Q99500 378 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 TMEM106BQ9NUM4 274 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 RALYQ9UKM9 306 aaKnown RBP10.12□□□□□ -0.79
LINC00959-201ENST00000456581 ACACBO00763 2458 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 ARHGAP32A7KAX9 2087 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 SNURFLB1AK76 121 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 PLAUP00749 431 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 ERVK-16P61578 105 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 C3orf36Q3SXR2 165 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 CT45A1Q5HYN5 189 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 OR4A47Q6IF82 309 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 FAM19A2Q8N3H0 131 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 CT45A3Q8NHU0 189 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 LINC01560Q8TB33 94 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 LINC00479Q96M42 142 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 GAFA1Q96PS6 74 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 CALYQ9NYX4 217 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 WNK2Q9Y3S1 2297 aa10.12□□□□□ -0.79
LINC00959-201ENST00000456581 FAM90A27PA6NNH2 459 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 FCN3O75636 299 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 IGKV1-16P04430 117 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 GATA4P43694 442 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 PSG5Q15238 335 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 C17orf58Q2M2W7 97 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 TRAT1Q6PIZ9 186 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 BAGE3Q86Y29 109 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 BAGE2Q86Y30 109 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 LYG1Q8N1E2 194 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 RAB1CQ92928 201 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 LSM4Q9Y4Z0 139 aaKnown RBP10.11□□□□□ -0.79
LINC00959-201ENST00000456581 ZFYVE26Q68DK2 2539 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 CRISP2P16562 243 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 TMPRSS3P57727 454 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 CENPWQ5EE01 88 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 MORN5Q5VZ52 161 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 STUMQ69YW2 141 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 PQLC2Q6ZP29 291 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 NUP37Q8NFH4 326 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 CCL17Q92583 94 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 TRAV34A0A0B4J273 112 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 TNFSF4P23510 183 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 NPY1RP25929 384 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 KRTDAPP60985 99 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 MMD2Q8IY49 270 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 SLC24A4Q8NFF2 622 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 EAF1Q96JC9 268 aaPredicted RBP10.11□□□□□ -0.79
LINC00959-201ENST00000456581 GNB4Q9HAV0 340 aa10.11□□□□□ -0.79
LINC00959-201ENST00000456581 C17orf100A8MU93 164 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 CD99P14209 185 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 MRPL54Q6P161 138 aaKnown RBP10.1□□□□□ -0.79
LINC00959-201ENST00000456581 TEPPQ6URK8 271 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 OR10W1Q8NGF6 305 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 FAM168AQ92567 244 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 UHRF2Q96PU4 802 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 WNT10AQ9GZT5 417 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 JPT1Q9UK76 154 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 TRAV5A0A0B4J249 113 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 SRRM4A7MD48 611 aaKnown RBP10.1□□□□□ -0.79
LINC00959-201ENST00000456581 CGB3P0DN86 165 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 CGB7P0DN87 165 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 MMDQ15546 238 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 FAM222BQ8WU58 562 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 ZNF503Q96F45 646 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 SAMD10Q9BYL1 202 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 NPVFQ9HCQ7 196 aa10.1□□□□□ -0.79
LINC00959-201ENST00000456581 CACNA1AO00555 2505 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 SHISA9B4DS77 424 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 E7EQL1 145 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 OR7C2O60412 319 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 OR10J1P30954 320 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 LGALS4P56470 323 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 LCN12Q6JVE5 192 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 Q8N976 141 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 OR9G1Q8NH87 305 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 SGK494Q96LW2 274 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 SSBP3Q9BWW4 388 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms