RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 ATP6V0BQ99437 205 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 TECRQ9NZ01 308 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 CACNG5Q9UF02 275 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 UFC1Q9Y3C8 167 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 TMEM56-RWDD3S4R434 201 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 DNAH3Q8TD57 4116 aa13.72□□□□□ -0.21
PDLIM2-215ENST00000456545 LINC00854A0A1B0GVQ3 168 aa13.72□□□□□ -0.21
PDLIM2-215ENST00000456545 CENPXA8MT69 81 aa13.72□□□□□ -0.21
PDLIM2-215ENST00000456545 CEBPZOSA8MTT3 80 aa13.72□□□□□ -0.21
PDLIM2-215ENST00000456545 NUPL2O15504 423 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-215ENST00000456545 MT-CO2P00403 227 aa13.72□□□□□ -0.21
PDLIM2-215ENST00000456545 GUCA2BQ16661 112 aa13.72□□□□□ -0.21
PDLIM2-215ENST00000456545 Q6ZRM9 215 aa13.72□□□□□ -0.21
PDLIM2-215ENST00000456545 ASCL2Q99929 193 aa13.72□□□□□ -0.21
PDLIM2-215ENST00000456545 HEYLQ9NQ87 328 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-215ENST00000456545 PRR13Q9NZ81 148 aa13.72□□□□□ -0.21
PDLIM2-215ENST00000456545 CACFD1Q9UGQ2 172 aa13.72□□□□□ -0.21
PDLIM2-215ENST00000456545 PRKDCP78527 4128 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-215ENST00000456545 NAP1L6A6NFF2 107 aa13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 CORTO00230 105 aa13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 NHLRC4P0CG21 123 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 SULT1A3P0DMM9 295 aa13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 SULT1A4P0DMN0 295 aa13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 VAMP1P23763 118 aa13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 DEFB114Q30KQ6 69 aa13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 CD300EQ496F6 205 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 TM4SF20Q53R12 229 aa13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 TMEM128Q5BJH2 165 aa13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 UXS1Q8NBZ7 420 aa13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 DUSP18Q8NEJ0 188 aa13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 OR52E5Q8NH55 327 aa13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 TXN2Q99757 166 aa13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 C20orf24Q9BUV8 137 aa13.71□□□□□ -0.21
PDLIM2-215ENST00000456545 IZUMO1RA6ND01 250 aa13.7□□□□□ -0.22
PDLIM2-215ENST00000456545 INS-IGF2F8WCM5 200 aa13.7□□□□□ -0.22
PDLIM2-215ENST00000456545 I3L2K1 104 aa13.7□□□□□ -0.22
PDLIM2-215ENST00000456545 GNG7O60262 68 aa13.7□□□□□ -0.22
PDLIM2-215ENST00000456545 IGHV3-48P01763 117 aa13.7□□□□□ -0.22
PDLIM2-215ENST00000456545 ELLP55199 621 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-215ENST00000456545 RELQ04864 619 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-215ENST00000456545 BAK1Q16611 211 aa13.7□□□□□ -0.22
PDLIM2-215ENST00000456545 UNQ9165/PRO28630Q6UXU0 137 aa13.7□□□□□ -0.22
PDLIM2-215ENST00000456545 ADAMTSL5Q6ZMM2 481 aa13.7□□□□□ -0.22
PDLIM2-215ENST00000456545 CACNG8Q8WXS5 425 aa13.7□□□□□ -0.22
PDLIM2-215ENST00000456545 MARC2Q969Z3 335 aa13.7□□□□□ -0.22
PDLIM2-215ENST00000456545 MRPL27Q9P0M9 148 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-215ENST00000456545 A0A0B4J2A0 478 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 A8MWP6 167 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 NDUFA4O00483 81 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 YIF1AO95070 293 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 NXPH3O95157 252 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 EDN2P20800 178 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 NPBWR1P48145 328 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 CCR6P51684 374 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 SUPT4H1P63272 117 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 RBMS2Q15434 407 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 LYZL2Q7Z4W2 148 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 CENPSQ8N2Z9 138 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 CHRDL1Q9BU40 450 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 ZNF436Q9C0F3 470 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 HIPK2Q9H2X6 1198 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 TUBA4BQ9H853 241 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 SHPKQ9UHJ6 478 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 SELENOKQ9Y6D0 94 aa13.69□□□□□ -0.22
PDLIM2-215ENST00000456545 TMEM213A2RRL7 107 aa13.68□□□□□ -0.22
PDLIM2-215ENST00000456545 RNASE2P10153 161 aaKnown RBP13.68□□□□□ -0.22
PDLIM2-215ENST00000456545 HTR2BP41595 481 aa13.68□□□□□ -0.22
PDLIM2-215ENST00000456545 RBPMS2Q6ZRY4 209 aaKnown RBP13.68□□□□□ -0.22
PDLIM2-215ENST00000456545 CTSGP08311 255 aa13.67□□□□□ -0.22
PDLIM2-215ENST00000456545 FRMD6-AS1P0C7T7 363 aa13.67□□□□□ -0.22
PDLIM2-215ENST00000456545 OPRK1P41145 380 aa13.67□□□□□ -0.22
PDLIM2-215ENST00000456545 SMCO1Q147U7 214 aa13.67□□□□□ -0.22
PDLIM2-215ENST00000456545 Q8N1Y9 231 aa13.67□□□□□ -0.22
PDLIM2-215ENST00000456545 OR1S1Q8NH92 325 aa13.67□□□□□ -0.22
PDLIM2-215ENST00000456545 TMEM190Q8WZ59 177 aa13.67□□□□□ -0.22
PDLIM2-215ENST00000456545 IGHV3OR16-8A0A075B7F1 116 aa13.66□□□□□ -0.22
PDLIM2-215ENST00000456545 F8W735 103 aaPredicted RBP13.66□□□□□ -0.22
PDLIM2-215ENST00000456545 SCGB2A1O75556 95 aa13.66□□□□□ -0.22
PDLIM2-215ENST00000456545 IGHV4-30-4P0DP06 118 aa13.66□□□□□ -0.22
PDLIM2-215ENST00000456545 FCGR2BP31994 310 aaPredicted RBP13.66□□□□□ -0.22
PDLIM2-215ENST00000456545 ADMP35318 185 aa13.66□□□□□ -0.22
PDLIM2-215ENST00000456545 CD81P60033 236 aa13.66□□□□□ -0.22
PDLIM2-215ENST00000456545 AARDQ4LEZ3 155 aa13.66□□□□□ -0.22
PDLIM2-215ENST00000456545 C11orf87Q6NUJ2 197 aa13.66□□□□□ -0.22
PDLIM2-215ENST00000456545 BTNL8Q6UX41 500 aa13.66□□□□□ -0.22
PDLIM2-215ENST00000456545 NOXA1Q86UR1 476 aa13.66□□□□□ -0.22
PDLIM2-215ENST00000456545 WDR89Q96FK6 387 aaPredicted RBP13.66□□□□□ -0.22
PDLIM2-215ENST00000456545 DAZ1Q9NQZ3 744 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-215ENST00000456545 MLXQ9UH92 298 aa13.66□□□□□ -0.22
PDLIM2-215ENST00000456545 A0A1B0GU03 582 aa13.65□□□□□ -0.22
PDLIM2-215ENST00000456545 DUXBA0A1W2PPF3 345 aa13.65□□□□□ -0.22
PDLIM2-215ENST00000456545 RPS10-NUDT3A0A1W2PQS6 291 aa13.65□□□□□ -0.22
PDLIM2-215ENST00000456545 ZNF785A8K8V0 405 aa13.65□□□□□ -0.22
PDLIM2-215ENST00000456545 ZNF207O43670 478 aaKnown RBP13.65□□□□□ -0.22
PDLIM2-215ENST00000456545 SCAF4O95104 1147 aaKnown RBP13.65□□□□□ -0.22
PDLIM2-215ENST00000456545 SFT2D2O95562 160 aa13.65□□□□□ -0.22
PDLIM2-215ENST00000456545 IL7P13232 177 aa13.65□□□□□ -0.22
PDLIM2-215ENST00000456545 ANKRD55Q3KP44 614 aa13.65□□□□□ -0.22
PDLIM2-215ENST00000456545 LAMTOR1Q6IAA8 161 aa13.65□□□□□ -0.22
PDLIM2-215ENST00000456545 NEURL2Q9BR09 285 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms