RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 OR10J3Q5JRS4 329 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 KLF17Q5JT82 389 aaPredicted RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 GLYATL3Q5SZD4 288 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 MRPL54Q6P161 138 aaKnown RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 TRIM40Q6P9F5 258 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 DUX4L9Q6RFH8 374 aaPredicted RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SBSNQ6UWP8 590 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 LCN15Q6UWW0 184 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 CXCL17Q6UXB2 119 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 C12orf54Q6X4T0 127 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 DNM1P46Q6ZS02 220 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 LINC00336Q6ZUF6 198 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SMIM5Q71RC9 77 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 CMC1Q7Z7K0 106 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OOSP2Q86WS3 158 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 C17orf82Q86X59 251 aaPredicted RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF547Q8IVP9 402 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 PIANPQ8IYJ0 282 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 PRR22Q8IZ63 422 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 TMEM256Q8N2U0 113 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 KRTCAP2Q8N6L1 136 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF433Q8N7K0 673 aaPredicted RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OR4K17Q8NGC6 315 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OR51A4Q8NGJ6 313 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OR51T1Q8NGJ9 327 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OR2K2Q8NGT1 345 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OR10D3Q8NH80 312 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 VSTM2AQ8TAG5 236 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 CMTM2Q8TAZ6 248 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SYNPRQ8TBG9 265 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OR51E1Q8TCB6 317 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 PPP1R1CQ8WVI7 109 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 TWIST2Q8WVJ9 160 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 GEMIN6Q8WXD5 167 aaKnown RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 BAALCQ8WXS3 180 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OR5P3Q8WZ94 311 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 RPEQ96AT9 228 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 C8orf44Q96CB5 159 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SLC25A38Q96DW6 304 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 TMEM101Q96IK0 257 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 AQP10Q96PS8 301 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 DERL3Q96Q80 235 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OR4C12Q96R67 309 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 GGTLC1Q9BX51 225 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 TSSK6Q9BXA6 273 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SAMD10Q9BYL1 202 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 COA1Q9GZY4 146 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 OR2D2Q9H210 308 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 REEP1Q9H902 201 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 ISG20L2Q9H9L3 353 aaKnown RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 ST20Q9HBF5 79 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 RDH14Q9HBH5 336 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SH2D2AQ9NP31 389 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SPANXB1Q9NS25 103 aaPredicted RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 FAM206AQ9NX38 181 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SPANXCQ9NY87 97 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 IDI2-AS1Q9NZ38 188 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 ABRACLQ9P1F3 81 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 DPM3Q9P2X0 92 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 CLCF1Q9UBD9 225 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 PRO0628Q9UI54 55 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 AK3Q9UIJ7 227 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 LSM7Q9UK45 103 aaKnown RBP1.52□□□□□ -2.17
LINC02540-201ENST00000455554 HIGD1AQ9Y241 93 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 IER3IP1Q9Y5U9 82 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF780BQ9Y6R6 833 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 V9GY05 133 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 LRRK1Q38SD2 2015 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 HEATR5AQ86XA9 2040 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SCN8AQ9UQD0 1980 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 TICRRQ7Z2Z1 1910 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 DLG5Q8TDM6 1919 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 MON2Q7Z3U7 1717 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 SHANK3Q9BYB0 1731 aa1.52□□□□□ -2.17
LINC02540-201ENST00000455554 C3P01024 1663 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 SLIT1O75093 1534 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 HELZP42694 1942 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 TRBV9A0A0B4J1U6 114 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 A0A0B4J2E0 115 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 MUC21A0A0G2JKD1 596 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 LOC107984640A0A0U1RRK4 108 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 MUC21A0A140T8X8 626 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 A0A1B0GX12 115 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 A0A1W2PRD5 423 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 RBFOX3A6NFN3 312 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 FNDC10F2Z333 226 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 K7N7A8 449 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 RER1O15258 196 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 ENSAO43768 121 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 OR1I1O60431 355 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 HSBP1O75506 76 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 DUSP14O95147 198 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 HLA-DRB1P01911 266 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 APOA2P02652 100 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 APOC2P02655 101 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 MT-ATP8P03928 68 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 HSPB1P04792 205 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 FGF1P05230 155 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 IL3P08700 152 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 SEC11BP0C7V7 166 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms