RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 ZC4H2Q9NQZ6 224 aa12.34□□□□□ -0.43
SMPD4-214ENST00000455548 TECRQ9NZ01 308 aaKnown RBP12.34□□□□□ -0.43
SMPD4-214ENST00000455548 CACFD1Q9UGQ2 172 aa12.34□□□□□ -0.43
SMPD4-214ENST00000455548 MFAP4P55083 255 aa12.33□□□□□ -0.44
SMPD4-214ENST00000455548 Q56UQ5 140 aa12.33□□□□□ -0.44
SMPD4-214ENST00000455548 TMEM128Q5BJH2 165 aa12.33□□□□□ -0.44
SMPD4-214ENST00000455548 ADAMTSL5Q6ZMM2 481 aa12.33□□□□□ -0.44
SMPD4-214ENST00000455548 TMED4Q7Z7H5 227 aa12.33□□□□□ -0.44
SMPD4-214ENST00000455548 GPR146Q96CH1 333 aa12.33□□□□□ -0.44
SMPD4-214ENST00000455548 TXN2Q99757 166 aa12.33□□□□□ -0.44
SMPD4-214ENST00000455548 ZNF436Q9C0F3 470 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-214ENST00000455548 CACNG5Q9UF02 275 aa12.33□□□□□ -0.44
SMPD4-214ENST00000455548 UFC1Q9Y3C8 167 aa12.33□□□□□ -0.44
SMPD4-214ENST00000455548 A0A0B4J2A0 478 aa12.32□□□□□ -0.44
SMPD4-214ENST00000455548 NAP1L6A6NFF2 107 aa12.32□□□□□ -0.44
SMPD4-214ENST00000455548 I3L2K1 104 aa12.32□□□□□ -0.44
SMPD4-214ENST00000455548 SULT1A3P0DMM9 295 aa12.32□□□□□ -0.44
SMPD4-214ENST00000455548 SULT1A4P0DMN0 295 aa12.32□□□□□ -0.44
SMPD4-214ENST00000455548 FCGR2BP31994 310 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-214ENST00000455548 ELLP55199 621 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-214ENST00000455548 RBMS2Q15434 407 aaKnown RBP12.32□□□□□ -0.44
SMPD4-214ENST00000455548 BAK1Q16611 211 aa12.32□□□□□ -0.44
SMPD4-214ENST00000455548 LGI3Q8N145 548 aa12.32□□□□□ -0.44
SMPD4-214ENST00000455548 UBAC2Q8NBM4 344 aa12.32□□□□□ -0.44
SMPD4-214ENST00000455548 MARC2Q969Z3 335 aa12.32□□□□□ -0.44
SMPD4-214ENST00000455548 SHPKQ9UHJ6 478 aa12.32□□□□□ -0.44
SMPD4-214ENST00000455548 IGHV3-35A0A0C4DH35 117 aa12.31□□□□□ -0.44
SMPD4-214ENST00000455548 TMEM213A2RRL7 107 aa12.31□□□□□ -0.44
SMPD4-214ENST00000455548 CORTO00230 105 aa12.31□□□□□ -0.44
SMPD4-214ENST00000455548 NDUFA4O00483 81 aa12.31□□□□□ -0.44
SMPD4-214ENST00000455548 MT-CO2P00403 227 aa12.31□□□□□ -0.44
SMPD4-214ENST00000455548 NHLRC4P0CG21 123 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-214ENST00000455548 RNASE2P10153 161 aaKnown RBP12.31□□□□□ -0.44
SMPD4-214ENST00000455548 CBLN1P23435 193 aa12.31□□□□□ -0.44
SMPD4-214ENST00000455548 DEFB114Q30KQ6 69 aa12.31□□□□□ -0.44
SMPD4-214ENST00000455548 CD300EQ496F6 205 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-214ENST00000455548 GTSCR1Q86UQ5 136 aa12.31□□□□□ -0.44
SMPD4-214ENST00000455548 TMEM190Q8WZ59 177 aa12.31□□□□□ -0.44
SMPD4-214ENST00000455548 PINX1Q96BK5 328 aaKnown RBP12.31□□□□□ -0.44
SMPD4-214ENST00000455548 CHRDL1Q9BU40 450 aa12.31□□□□□ -0.44
SMPD4-214ENST00000455548 DUXBA0A1W2PPF3 345 aa12.3□□□□□ -0.44
SMPD4-214ENST00000455548 IZUMO1RA6ND01 250 aa12.3□□□□□ -0.44
SMPD4-214ENST00000455548 F8W735 103 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-214ENST00000455548 NUPL2O15504 423 aaKnown RBP12.3□□□□□ -0.44
SMPD4-214ENST00000455548 VAMP1P23763 118 aa12.3□□□□□ -0.44
SMPD4-214ENST00000455548 ADMP35318 185 aa12.3□□□□□ -0.44
SMPD4-214ENST00000455548 HTR2BP41595 481 aa12.3□□□□□ -0.44
SMPD4-214ENST00000455548 CCR6P51684 374 aa12.3□□□□□ -0.44
SMPD4-214ENST00000455548 RELQ04864 619 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-214ENST00000455548 TM4SF20Q53R12 229 aa12.3□□□□□ -0.44
SMPD4-214ENST00000455548 PVRIGQ6DKI7 326 aa12.3□□□□□ -0.44
SMPD4-214ENST00000455548 UNQ9165/PRO28630Q6UXU0 137 aa12.3□□□□□ -0.44
SMPD4-214ENST00000455548 Q8N1Y9 231 aa12.3□□□□□ -0.44
SMPD4-214ENST00000455548 CENPSQ8N2Z9 138 aa12.3□□□□□ -0.44
SMPD4-214ENST00000455548 SDHCQ99643 169 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-214ENST00000455548 C7orf50Q9BRJ6 194 aaKnown RBP12.3□□□□□ -0.44
SMPD4-214ENST00000455548 HEYLQ9NQ87 328 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-214ENST00000455548 PRR13Q9NZ81 148 aa12.3□□□□□ -0.44
SMPD4-214ENST00000455548 CENPXA8MT69 81 aa12.29□□□□□ -0.44
SMPD4-214ENST00000455548 CEBPZOSA8MTT3 80 aa12.29□□□□□ -0.44
SMPD4-214ENST00000455548 CTSGP08311 255 aa12.29□□□□□ -0.44
SMPD4-214ENST00000455548 EDN2P20800 178 aa12.29□□□□□ -0.44
SMPD4-214ENST00000455548 NPBWR1P48145 328 aa12.29□□□□□ -0.44
SMPD4-214ENST00000455548 UBE2MP61081 183 aaKnown RBP12.29□□□□□ -0.44
SMPD4-214ENST00000455548 SMCO1Q147U7 214 aa12.29□□□□□ -0.44
SMPD4-214ENST00000455548 BSXQ3C1V8 233 aa12.29□□□□□ -0.44
SMPD4-214ENST00000455548 NMSQ5H8A3 153 aa12.29□□□□□ -0.44
SMPD4-214ENST00000455548 LYZL2Q7Z4W2 148 aa12.29□□□□□ -0.44
SMPD4-214ENST00000455548 UXS1Q8NBZ7 420 aa12.29□□□□□ -0.44
SMPD4-214ENST00000455548 CACNG8Q8WXS5 425 aa12.29□□□□□ -0.44
SMPD4-214ENST00000455548 DAZ1Q9NQZ3 744 aaKnown RBP12.29□□□□□ -0.44
SMPD4-214ENST00000455548 MRPL27Q9P0M9 148 aaKnown RBP12.29□□□□□ -0.44
SMPD4-214ENST00000455548 A0A1B0GU03 582 aa12.28□□□□□ -0.44
SMPD4-214ENST00000455548 GNG7O60262 68 aa12.28□□□□□ -0.44
SMPD4-214ENST00000455548 NDUFB6O95139 128 aa12.28□□□□□ -0.44
SMPD4-214ENST00000455548 C8orf88P0DMB2 117 aa12.28□□□□□ -0.44
SMPD4-214ENST00000455548 IL7P13232 177 aa12.28□□□□□ -0.44
SMPD4-214ENST00000455548 LRTM2Q8N967 370 aa12.28□□□□□ -0.44
SMPD4-214ENST00000455548 DUSP18Q8NEJ0 188 aa12.28□□□□□ -0.44
SMPD4-214ENST00000455548 DNAH9Q9NYC9 4486 aa12.28□□□□□ -0.44
SMPD4-214ENST00000455548 ZNF785A8K8V0 405 aa12.27□□□□□ -0.45
SMPD4-214ENST00000455548 K7EMT4 169 aa12.27□□□□□ -0.45
SMPD4-214ENST00000455548 SFT2D2O95562 160 aa12.27□□□□□ -0.45
SMPD4-214ENST00000455548 IGHV3-48P01763 117 aa12.27□□□□□ -0.45
SMPD4-214ENST00000455548 FRMD6-AS1P0C7T7 363 aa12.27□□□□□ -0.45
SMPD4-214ENST00000455548 TNFRSF9Q07011 255 aa12.27□□□□□ -0.45
SMPD4-214ENST00000455548 GUCA2BQ16661 112 aa12.27□□□□□ -0.45
SMPD4-214ENST00000455548 LINC00299Q6ZSB3 139 aa12.27□□□□□ -0.45
SMPD4-214ENST00000455548 NOXA1Q86UR1 476 aa12.27□□□□□ -0.45
SMPD4-214ENST00000455548 HIPK2Q9H2X6 1198 aa12.27□□□□□ -0.45
SMPD4-214ENST00000455548 HSPB7Q9UBY9 170 aa12.27□□□□□ -0.45
SMPD4-214ENST00000455548 MLXQ9UH92 298 aa12.27□□□□□ -0.45
SMPD4-214ENST00000455548 TRAV25A0A0B4J276 109 aa12.26□□□□□ -0.45
SMPD4-214ENST00000455548 LINC00854A0A1B0GVQ3 168 aa12.26□□□□□ -0.45
SMPD4-214ENST00000455548 RPS10-NUDT3A0A1W2PQS6 291 aa12.26□□□□□ -0.45
SMPD4-214ENST00000455548 A8MZ25 164 aa12.26□□□□□ -0.45
SMPD4-214ENST00000455548 IGHV4-30-4P0DP06 118 aa12.26□□□□□ -0.45
SMPD4-214ENST00000455548 OPRK1P41145 380 aa12.26□□□□□ -0.45
SMPD4-214ENST00000455548 PPP1R1AQ13522 171 aa12.26□□□□□ -0.45
SMPD4-214ENST00000455548 CNPY1Q3B7I2 92 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms