RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 ST8SIA2Q92186 375 aa13.57□□□□□ -0.24
MSH6-206ENST00000455383 TSC22D3Q99576 134 aa13.57□□□□□ -0.24
MSH6-206ENST00000455383 ZNF2Q9BSG1 426 aaPredicted RBP13.57□□□□□ -0.24
MSH6-206ENST00000455383 MS4A6AQ9H2W1 248 aa13.57□□□□□ -0.24
MSH6-206ENST00000455383 APOHP02749 345 aaPredicted RBP13.56□□□□□ -0.24
MSH6-206ENST00000455383 RFX2P48378 723 aa13.56□□□□□ -0.24
MSH6-206ENST00000455383 LEMD1Q68G75 181 aa13.56□□□□□ -0.24
MSH6-206ENST00000455383 TOMM20LQ6UXN7 152 aa13.56□□□□□ -0.24
MSH6-206ENST00000455383 FAM24BQ8N5W8 94 aa13.56□□□□□ -0.24
MSH6-206ENST00000455383 FCGR1BQ92637 280 aa13.56□□□□□ -0.24
MSH6-206ENST00000455383 MISP3Q96FF7 219 aa13.56□□□□□ -0.24
MSH6-206ENST00000455383 GINS3Q9BRX5 216 aa13.56□□□□□ -0.24
MSH6-206ENST00000455383 FXYD6Q9H0Q3 95 aa13.56□□□□□ -0.24
MSH6-206ENST00000455383 RNF167Q9H6Y7 350 aa13.56□□□□□ -0.24
MSH6-206ENST00000455383 FAM212BQ9NTI7 297 aaPredicted RBP13.56□□□□□ -0.24
MSH6-206ENST00000455383 NAT1P18440 290 aa13.55□□□□□ -0.24
MSH6-206ENST00000455383 CMTM1Q8IZ96 169 aa13.55□□□□□ -0.24
MSH6-206ENST00000455383 VCX3BQ9H321 246 aa13.55□□□□□ -0.24
MSH6-206ENST00000455383 ZFAND3Q9H8U3 227 aa13.55□□□□□ -0.24
MSH6-206ENST00000455383 IGHV4-28A0A0C4DH34 117 aa13.54□□□□□ -0.24
MSH6-206ENST00000455383 GPR31O00270 319 aa13.54□□□□□ -0.24
MSH6-206ENST00000455383 ST8SIA3O43173 380 aa13.54□□□□□ -0.24
MSH6-206ENST00000455383 XRCC3O43542 346 aa13.54□□□□□ -0.24
MSH6-206ENST00000455383 GNG7O60262 68 aa13.54□□□□□ -0.24
MSH6-206ENST00000455383 IGHV3-48P01763 117 aa13.54□□□□□ -0.24
MSH6-206ENST00000455383 HLA-DMBP28068 263 aa13.54□□□□□ -0.24
MSH6-206ENST00000455383 PRCDQ00LT1 54 aa13.54□□□□□ -0.24
MSH6-206ENST00000455383 TMEM41BQ5BJD5 291 aa13.54□□□□□ -0.24
MSH6-206ENST00000455383 TRPT1Q86TN4 253 aaKnown RBP13.54□□□□□ -0.24
MSH6-206ENST00000455383 DUSP18Q8NEJ0 188 aa13.54□□□□□ -0.24
MSH6-206ENST00000455383 SEC22AQ96IW7 307 aa13.54□□□□□ -0.24
MSH6-206ENST00000455383 IFT46Q9NQC8 304 aa13.54□□□□□ -0.24
MSH6-206ENST00000455383 RAB26Q9ULW5 256 aa13.54□□□□□ -0.24
MSH6-206ENST00000455383 ZNF705EA8MWA4 302 aaPredicted RBP13.53□□□□□ -0.24
MSH6-206ENST00000455383 DNASE2O00115 360 aaPredicted RBP13.53□□□□□ -0.24
MSH6-206ENST00000455383 TMEM127O75204 238 aa13.53□□□□□ -0.24
MSH6-206ENST00000455383 EIF4EP06730 217 aaKnown RBP13.53□□□□□ -0.24
MSH6-206ENST00000455383 MIFP14174 115 aa13.53□□□□□ -0.24
MSH6-206ENST00000455383 TSPAN14Q8NG11 270 aa13.53□□□□□ -0.24
MSH6-206ENST00000455383 X6R8D5 127 aa13.53□□□□□ -0.24
MSH6-206ENST00000455383 PKD1P98161 4303 aa13.53□□□□□ -0.24
MSH6-206ENST00000455383 IGHV4-4A0A075B6R2 117 aa13.52□□□□□ -0.25
MSH6-206ENST00000455383 TRAV10A0A0B4J240 114 aa13.52□□□□□ -0.25
MSH6-206ENST00000455383 IGKV1-39P01597 117 aa13.52□□□□□ -0.25
MSH6-206ENST00000455383 PMP2P02689 132 aa13.52□□□□□ -0.25
MSH6-206ENST00000455383 IGKV1D-39P04432 117 aa13.52□□□□□ -0.25
MSH6-206ENST00000455383 HSPE1P61604 102 aaKnown RBP13.52□□□□□ -0.25
MSH6-206ENST00000455383 ZNF600Q6ZNG1 722 aa13.52□□□□□ -0.25
MSH6-206ENST00000455383 Q6ZTC4 211 aa13.52□□□□□ -0.25
MSH6-206ENST00000455383 STHQ8IWL8 128 aa13.52□□□□□ -0.25
MSH6-206ENST00000455383 ABCA13Q86UQ4 5058 aa13.52□□□□□ -0.25
MSH6-206ENST00000455383 ELOA3CA0A087WX78 387 aaPredicted RBP13.51□□□□□ -0.25
MSH6-206ENST00000455383 IGHV3-66A0A0C4DH42 116 aa13.51□□□□□ -0.25
MSH6-206ENST00000455383 MED14OSP0DP75 135 aa13.51□□□□□ -0.25
MSH6-206ENST00000455383 SPP1P10451 314 aa13.51□□□□□ -0.25
MSH6-206ENST00000455383 TAS2R46P59540 309 aa13.51□□□□□ -0.25
MSH6-206ENST00000455383 PVRIGQ6DKI7 326 aa13.51□□□□□ -0.25
MSH6-206ENST00000455383 MORN3Q6PF18 240 aaPredicted RBP13.51□□□□□ -0.25
MSH6-206ENST00000455383 OR5H2Q8NGV7 314 aa13.51□□□□□ -0.25
MSH6-206ENST00000455383 PINX1Q96BK5 328 aaKnown RBP13.51□□□□□ -0.25
MSH6-206ENST00000455383 GRAMD2BQ96HH9 432 aa13.51□□□□□ -0.25
MSH6-206ENST00000455383 RNF126Q9BV68 326 aa13.51□□□□□ -0.25
MSH6-206ENST00000455383 PUS1Q9Y606 427 aaKnown RBP eCLIP13.51□□□□□ -0.25
MSH6-206ENST00000455383 A0A1B0GU03 582 aa13.5□□□□□ -0.25
MSH6-206ENST00000455383 K7EQG2 157 aa13.5□□□□□ -0.25
MSH6-206ENST00000455383 C4BPBP20851 252 aa13.5□□□□□ -0.25
MSH6-206ENST00000455383 NPBWR1P48145 328 aa13.5□□□□□ -0.25
MSH6-206ENST00000455383 LYSMD2Q8IV50 215 aa13.5□□□□□ -0.25
MSH6-206ENST00000455383 CSNK1G2-AS1Q8NCQ2 148 aa13.5□□□□□ -0.25
MSH6-206ENST00000455383 OR6F1Q8NGZ6 308 aa13.5□□□□□ -0.25
MSH6-206ENST00000455383 OR4A16Q8NH70 328 aa13.5□□□□□ -0.25
MSH6-206ENST00000455383 AGRNO00468 2067 aa13.49□□□□□ -0.25
MSH6-206ENST00000455383 INS-IGF2F8WCM5 200 aa13.49□□□□□ -0.25
MSH6-206ENST00000455383 TMEM50AO95807 157 aa13.49□□□□□ -0.25
MSH6-206ENST00000455383 ERHP84090 104 aaKnown RBP13.49□□□□□ -0.25
MSH6-206ENST00000455383 PHLDA2Q53GA4 152 aa13.49□□□□□ -0.25
MSH6-206ENST00000455383 H2BFWTQ7Z2G1 175 aa13.49□□□□□ -0.25
MSH6-206ENST00000455383 S100A16Q96FQ6 103 aaKnown RBP13.49□□□□□ -0.25
MSH6-206ENST00000455383 TMEM231Q9H6L2 316 aa13.49□□□□□ -0.25
MSH6-206ENST00000455383 LOC100506127A0A0U1RQW1 187 aa13.48□□□□□ -0.25
MSH6-206ENST00000455383 AMBPP02760 352 aa13.48□□□□□ -0.25
MSH6-206ENST00000455383 TAS2R20P59543 309 aa13.48□□□□□ -0.25
MSH6-206ENST00000455383 RPL11P62913 178 aaKnown RBP13.48□□□□□ -0.25
MSH6-206ENST00000455383 TBC1D26Q86UD7 250 aa13.48□□□□□ -0.25
MSH6-206ENST00000455383 RABAC1Q9UI14 185 aa13.48□□□□□ -0.25
MSH6-206ENST00000455383 A0A1W2PS18 150 aa13.47□□□□□ -0.25
MSH6-206ENST00000455383 NPPCP23582 126 aa13.47□□□□□ -0.25
MSH6-206ENST00000455383 HRH1P35367 487 aa13.47□□□□□ -0.25
MSH6-206ENST00000455383 LPCAT3Q6P1A2 487 aa13.47□□□□□ -0.25
MSH6-206ENST00000455383 DCANP1Q8TF63 244 aa13.47□□□□□ -0.25
MSH6-206ENST00000455383 MRGPRFQ96AM1 343 aa13.47□□□□□ -0.25
MSH6-206ENST00000455383 YTHDF1Q9BYJ9 559 aaKnown RBP13.47□□□□□ -0.25
MSH6-206ENST00000455383 KNCNA6PVL3 124 aa13.46□□□□□ -0.25
MSH6-206ENST00000455383 RTL8CO15255 209 aa13.46□□□□□ -0.25
MSH6-206ENST00000455383 CRYBB3P26998 211 aa13.46□□□□□ -0.25
MSH6-206ENST00000455383 S100GP29377 79 aa13.46□□□□□ -0.25
MSH6-206ENST00000455383 UCP3P55916 312 aa13.46□□□□□ -0.25
MSH6-206ENST00000455383 C12orf74Q32Q52 190 aa13.46□□□□□ -0.25
MSH6-206ENST00000455383 UBE2NLQ5JXB2 153 aa13.46□□□□□ -0.25
MSH6-206ENST00000455383 TMEM69Q5SWH9 247 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms