RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 RND2P52198 227 aa11□□□□□ -0.65
CLK3-203ENST00000454830 PSG5Q15238 335 aa11□□□□□ -0.65
CLK3-203ENST00000454830 TMEM241Q24JQ0 296 aa11□□□□□ -0.65
CLK3-203ENST00000454830 NANPQ8TBE9 248 aa11□□□□□ -0.65
CLK3-203ENST00000454830 P2RX4Q99571 388 aa11□□□□□ -0.65
CLK3-203ENST00000454830 PARLQ9H300 379 aa11□□□□□ -0.65
CLK3-203ENST00000454830 ASH1LQ9NR48 2969 aaKnown RBP11□□□□□ -0.65
CLK3-203ENST00000454830 PRB1P04280 392 aa11□□□□□ -0.65
CLK3-203ENST00000454830 AREGP15514 252 aa11□□□□□ -0.65
CLK3-203ENST00000454830 MIR17HGQ75NE6 70 aa11□□□□□ -0.65
CLK3-203ENST00000454830 CXorf1O96002 111 aa11□□□□□ -0.65
CLK3-203ENST00000454830 PRSS8Q16651 343 aa11□□□□□ -0.65
CLK3-203ENST00000454830 DTX2Q86UW9 622 aa11□□□□□ -0.65
CLK3-203ENST00000454830 PPP1R27Q86WC6 154 aa11□□□□□ -0.65
CLK3-203ENST00000454830 OR4A5Q8NH83 315 aa11□□□□□ -0.65
CLK3-203ENST00000454830 C22orf15Q8WYQ4 148 aa11□□□□□ -0.65
CLK3-203ENST00000454830 BPESC1Q9GZL8 116 aa11□□□□□ -0.65
CLK3-203ENST00000454830 FOXH1O75593 365 aa10.99□□□□□ -0.65
CLK3-203ENST00000454830 TSPAN9O75954 239 aa10.99□□□□□ -0.65
CLK3-203ENST00000454830 MT-ND4LP03901 98 aa10.99□□□□□ -0.65
CLK3-203ENST00000454830 OR10J4P0C629 311 aa10.99□□□□□ -0.65
CLK3-203ENST00000454830 Q8N7P7 452 aa10.99□□□□□ -0.65
CLK3-203ENST00000454830 BEND2Q8NDZ0 799 aa10.99□□□□□ -0.65
CLK3-203ENST00000454830 SIGLEC9Q9Y336 463 aa10.99□□□□□ -0.65
CLK3-203ENST00000454830 LSM4Q9Y4Z0 139 aaKnown RBP10.99□□□□□ -0.65
CLK3-203ENST00000454830 CENPEQ02224 2701 aa10.99□□□□□ -0.65
CLK3-203ENST00000454830 ZNF137PP52743 207 aa10.99□□□□□ -0.65
CLK3-203ENST00000454830 EFNA4P52798 201 aa10.99□□□□□ -0.65
CLK3-203ENST00000454830 FAM103A1Q9BTL3 118 aaKnown RBP10.99□□□□□ -0.65
CLK3-203ENST00000454830 A6NNC1 897 aa10.99□□□□□ -0.65
CLK3-203ENST00000454830 FCN1O00602 326 aa10.99□□□□□ -0.65
CLK3-203ENST00000454830 NDUFB4O95168 129 aa10.99□□□□□ -0.65
CLK3-203ENST00000454830 MDKP21741 143 aaPredicted RBP10.99□□□□□ -0.65
CLK3-203ENST00000454830 IGKV1OR2-108A0A075B7D4 117 aa10.98□□□□□ -0.65
CLK3-203ENST00000454830 MOSP00540 346 aa10.98□□□□□ -0.65
CLK3-203ENST00000454830 LINC00869P0C866 280 aa10.98□□□□□ -0.65
CLK3-203ENST00000454830 RPL29P47914 159 aaKnown RBP10.98□□□□□ -0.65
CLK3-203ENST00000454830 FLI1Q01543 452 aaPredicted RBP10.98□□□□□ -0.65
CLK3-203ENST00000454830 TPTE2P1Q5T6R2 138 aa10.98□□□□□ -0.65
CLK3-203ENST00000454830 VMO1Q7Z5L0 202 aa10.98□□□□□ -0.65
CLK3-203ENST00000454830 TEX45Q8NA69 505 aa10.98□□□□□ -0.65
CLK3-203ENST00000454830 NAT8Q9UHE5 227 aa10.98□□□□□ -0.65
CLK3-203ENST00000454830 COX7A2P2O60397 106 aa10.98□□□□□ -0.65
CLK3-203ENST00000454830 RAB5AP20339 215 aa10.98□□□□□ -0.65
CLK3-203ENST00000454830 RNF212Q495C1 297 aa10.98□□□□□ -0.65
CLK3-203ENST00000454830 DOPEY1Q5JWR5 2465 aa10.98□□□□□ -0.65
CLK3-203ENST00000454830 A0A0U1RQK1 487 aa10.98□□□□□ -0.65
CLK3-203ENST00000454830 ORM2P19652 201 aa10.98□□□□□ -0.65
CLK3-203ENST00000454830 ZFP36P26651 326 aaKnown RBP10.98□□□□□ -0.65
CLK3-203ENST00000454830 RPL35P42766 123 aaKnown RBP10.98□□□□□ -0.65
CLK3-203ENST00000454830 SSBP2P81877 361 aaPredicted RBP10.98□□□□□ -0.65
CLK3-203ENST00000454830 C1orf159Q96HA4 380 aa10.98□□□□□ -0.65
CLK3-203ENST00000454830 GCHFRP30047 84 aa10.97□□□□□ -0.65
CLK3-203ENST00000454830 BSXQ3C1V8 233 aa10.97□□□□□ -0.65
CLK3-203ENST00000454830 FNDC4Q9H6D8 234 aaPredicted RBP10.97□□□□□ -0.65
CLK3-203ENST00000454830 SDF2L1Q9HCN8 221 aa10.97□□□□□ -0.65
CLK3-203ENST00000454830 TMEM8BA6NDV4 472 aa10.97□□□□□ -0.65
CLK3-203ENST00000454830 SEC14L6B5MCN3 397 aa10.97□□□□□ -0.65
CLK3-203ENST00000454830 STAG3L2P0CL84 134 aa10.97□□□□□ -0.65
CLK3-203ENST00000454830 STAG3L3P0CL85 134 aa10.97□□□□□ -0.65
CLK3-203ENST00000454830 SP5Q6BEB4 398 aaPredicted RBP10.97□□□□□ -0.65
CLK3-203ENST00000454830 OR4X1Q8NH49 305 aa10.97□□□□□ -0.65
CLK3-203ENST00000454830 SRSF12Q8WXF0 261 aaKnown RBP10.97□□□□□ -0.65
CLK3-203ENST00000454830 SLC45A2Q9UMX9 530 aa10.97□□□□□ -0.65
CLK3-203ENST00000454830 ZNF90Q03938 601 aa10.97□□□□□ -0.65
CLK3-203ENST00000454830 PNRC1Q12796 327 aaPredicted RBP10.97□□□□□ -0.65
CLK3-203ENST00000454830 LDLRAD2Q5SZI1 272 aa10.97□□□□□ -0.65
CLK3-203ENST00000454830 UHRF2Q96PU4 802 aa10.97□□□□□ -0.65
CLK3-203ENST00000454830 SLC25A33Q9BSK2 321 aa10.97□□□□□ -0.65
CLK3-203ENST00000454830 DERL1Q9BUN8 251 aa10.97□□□□□ -0.65
CLK3-203ENST00000454830 PRTN3P24158 256 aa10.96□□□□□ -0.65
CLK3-203ENST00000454830 SMUG1Q53HV7 270 aa10.96□□□□□ -0.65
CLK3-203ENST00000454830 POLQO75417 2590 aa10.96□□□□□ -0.65
CLK3-203ENST00000454830 IGHV3OR16-10A0A075B7F0 116 aa10.96□□□□□ -0.65
CLK3-203ENST00000454830 CGB1A6NKQ9 187 aa10.96□□□□□ -0.65
CLK3-203ENST00000454830 TMEM250H0YL14 139 aa10.96□□□□□ -0.65
CLK3-203ENST00000454830 ATP5IP56385 69 aaPredicted RBP10.96□□□□□ -0.65
CLK3-203ENST00000454830 C8orf46Q8TAG6 207 aa10.96□□□□□ -0.65
CLK3-203ENST00000454830 USP24Q9UPU5 2620 aa10.96□□□□□ -0.66
CLK3-203ENST00000454830 TGIF2-C20orf24A0A0A6YYL0 155 aa10.96□□□□□ -0.66
CLK3-203ENST00000454830 PGPEP1LA6NFU8 196 aa10.96□□□□□ -0.66
CLK3-203ENST00000454830 H7BYZ3 331 aa10.96□□□□□ -0.66
CLK3-203ENST00000454830 VENTXO95231 258 aa10.96□□□□□ -0.66
CLK3-203ENST00000454830 RBP4P02753 201 aa10.96□□□□□ -0.66
CLK3-203ENST00000454830 CYP2G1PQ6ZSU1 146 aa10.96□□□□□ -0.66
CLK3-203ENST00000454830 CACNG8Q8WXS5 425 aa10.96□□□□□ -0.66
CLK3-203ENST00000454830 GSX1Q9H4S2 264 aaPredicted RBP10.96□□□□□ -0.66
CLK3-203ENST00000454830 TECRQ9NZ01 308 aaKnown RBP10.96□□□□□ -0.66
CLK3-203ENST00000454830 CLDN34H7C241 214 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 TOX4O94842 621 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 TAS2R45P59539 299 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 LY6G5BQ8NDX9 201 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 OR1B1Q8NGR6 318 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 OR5B12Q96R08 314 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 FUT9Q9Y231 359 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 S4R3C0 116 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 USP9YO00507 2555 aaPredicted RBP10.95□□□□□ -0.66
CLK3-203ENST00000454830 CSPG4Q6UVK1 2322 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 AGAP20933 346 aa10.95□□□□□ -0.66
CLK3-203ENST00000454830 RNASEH2CQ8TDP1 164 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms