RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ZFP36P26651 326 aaKnown RBP12.88□□□□□ -0.35
SNX17-204ENST00000453453 GPR12P47775 334 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 GNG10P50151 68 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 PAFAH1B2P68402 229 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 ZNF585BQ52M93 769 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 OR10G9Q8NGN4 311 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 OR10G7Q8NGN6 311 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 OR4F5Q8NH21 305 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 OR4F4Q96R69 305 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 C20orf144Q9BQM9 153 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 TMEM133Q9H2Q1 129 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 PXMP4Q9Y6I8 212 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 CELSR2Q9HCU4 2923 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 IGHV2-70DA0A0C4DH43 119 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 IGKV1D-33P01593 117 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 IGKV1-33P01594 117 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 IGHV3-7P01780 117 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 P0C879 139 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 SPANXN5Q5MJ07 72 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 FAM53AQ6NSI3 398 aaPredicted RBP12.88□□□□□ -0.35
SNX17-204ENST00000453453 ACSM6Q6P461 480 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 LEAP2Q969E1 77 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 GPHA2Q96T91 129 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 KCNIP2Q9NS61 270 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 POLR3KQ9Y2Y1 108 aaPredicted RBP12.88□□□□□ -0.35
SNX17-204ENST00000453453 FBN2P35556 2912 aa12.87□□□□□ -0.35
SNX17-204ENST00000453453 NAV2Q8IVL1 2488 aa12.87□□□□□ -0.35
SNX17-204ENST00000453453 IGLV2-14P01704 120 aa12.87□□□□□ -0.35
SNX17-204ENST00000453453 IL3RAP26951 378 aa12.87□□□□□ -0.35
SNX17-204ENST00000453453 YPEL3P61236 119 aaPredicted RBP12.87□□□□□ -0.35
SNX17-204ENST00000453453 ARF6P62330 175 aa12.87□□□□□ -0.35
SNX17-204ENST00000453453 C1orf122Q6ZSJ8 110 aa12.87□□□□□ -0.35
SNX17-204ENST00000453453 DRAM1Q8N682 238 aa12.87□□□□□ -0.35
SNX17-204ENST00000453453 ZNF709Q8N972 641 aa12.87□□□□□ -0.35
SNX17-204ENST00000453453 C8orf31Q8N9H6 132 aa12.87□□□□□ -0.35
SNX17-204ENST00000453453 NECAP1Q8NC96 275 aa12.87□□□□□ -0.35
SNX17-204ENST00000453453 ZNF439Q8NDP4 499 aa12.87□□□□□ -0.35
SNX17-204ENST00000453453 OR9G1Q8NH87 305 aa12.87□□□□□ -0.35
SNX17-204ENST00000453453 TMEM37Q8WXS4 190 aa12.87□□□□□ -0.35
SNX17-204ENST00000453453 ELOVL1Q9BW60 279 aa12.87□□□□□ -0.35
SNX17-204ENST00000453453 POLQO75417 2590 aa12.86□□□□□ -0.35
SNX17-204ENST00000453453 LINC00614P0C842 121 aa12.86□□□□□ -0.35
SNX17-204ENST00000453453 SELENOTP62341 195 aa12.86□□□□□ -0.35
SNX17-204ENST00000453453 CT45A1Q5HYN5 189 aa12.86□□□□□ -0.35
SNX17-204ENST00000453453 SLC25A48Q6ZT89 311 aaKnown RBP12.86□□□□□ -0.35
SNX17-204ENST00000453453 C11orf42Q8N5U0 333 aa12.86□□□□□ -0.35
SNX17-204ENST00000453453 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.86□□□□□ -0.35
SNX17-204ENST00000453453 CT45A3Q8NHU0 189 aa12.86□□□□□ -0.35
SNX17-204ENST00000453453 RBM14Q96PK6 669 aaKnown RBP12.86□□□□□ -0.35
SNX17-204ENST00000453453 IFI27L2Q9H2X8 130 aa12.86□□□□□ -0.35
SNX17-204ENST00000453453 SLC25A22Q9H936 323 aa12.86□□□□□ -0.35
SNX17-204ENST00000453453 RAB29O14966 203 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 ZNF134P52741 427 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 PRRX1P54821 245 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 CATR1Q13166 79 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 FFAR4Q5NUL3 377 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 TEX38Q6PEX7 206 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 LYG1Q8N1E2 194 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 ABHD12Q8N2K0 398 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 LINC00311Q8N616 119 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 OR10X1Q8NGY0 326 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 TNFRSF14Q92956 283 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 S1PR3Q99500 378 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 CLEC7AQ9BXN2 247 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 LPAR2Q9HBW0 351 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 TRAPPC1Q9Y5R8 145 aa12.85□□□□□ -0.35
SNX17-204ENST00000453453 PMS2P5A8MQ11 134 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 J3QR06 171 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 RPLP1P05386 114 aaKnown RBP12.84□□□□□ -0.35
SNX17-204ENST00000453453 PAX2Q02962 417 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 LOXL1Q08397 574 aaPredicted RBP12.84□□□□□ -0.35
SNX17-204ENST00000453453 LINC01551Q86U37 167 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 OR10P1Q8NGE3 313 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 MS4A10Q96PG2 267 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 HSD17B10Q99714 261 aaKnown RBP12.84□□□□□ -0.35
SNX17-204ENST00000453453 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.84□□□□□ -0.35
SNX17-204ENST00000453453 APCP25054 2843 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 ARHGAP32A7KAX9 2087 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 IGHV2-26A0A0B4J1V2 119 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 B4DSR2 109 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 C11orf94C9JXX5 98 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 MPDU1O75352 247 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 SCGB1D1O95968 90 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 PRTN3P24158 256 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 CDC34P49427 236 aaPredicted RBP12.84□□□□□ -0.35
SNX17-204ENST00000453453 TPPP2P59282 170 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 TEX43Q6ZNM6 134 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 Q8N7P7 452 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 Q96MF0 132 aa12.84□□□□□ -0.35
SNX17-204ENST00000453453 AMMECR1Q9Y4X0 333 aaPredicted RBP12.84□□□□□ -0.35
SNX17-204ENST00000453453 MARCH11A6NNE9 402 aa12.83□□□□□ -0.36
SNX17-204ENST00000453453 PAGE4O60829 102 aa12.83□□□□□ -0.36
SNX17-204ENST00000453453 TOX4O94842 621 aa12.83□□□□□ -0.36
SNX17-204ENST00000453453 ZNF16P17020 682 aaPredicted RBP12.83□□□□□ -0.36
SNX17-204ENST00000453453 COX7A1P24310 79 aa12.83□□□□□ -0.36
SNX17-204ENST00000453453 UTF1Q5T230 341 aa12.83□□□□□ -0.36
SNX17-204ENST00000453453 FAM78BQ5VT40 261 aa12.83□□□□□ -0.36
SNX17-204ENST00000453453 OR8G2PQ6IF36 304 aa12.83□□□□□ -0.36
SNX17-204ENST00000453453 VMO1Q7Z5L0 202 aa12.83□□□□□ -0.36
SNX17-204ENST00000453453 ZNF596Q8TC21 504 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms