RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 C16orf82Q7Z2V1 217 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 LILRB2Q8N423 598 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 TTC9CQ8N5M4 171 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 OR1P1Q8NH06 330 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 RNASEH2CQ8TDP1 164 aaKnown RBP4.73□□□□□ -1.65
SDC4P-201ENST00000453285 ARPC1AQ92747 370 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 TAF15Q92804 592 aaKnown RBP eCLIP4.73□□□□□ -1.65
SDC4P-201ENST00000453285 RASL11BQ9BPW5 248 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 RSG1Q9BU20 258 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 WNT10AQ9GZT5 417 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 SLC25A32Q9H2D1 315 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 NPVFQ9HCQ7 196 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 UQCC1Q9NVA1 299 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 MRPL36Q9P0J6 103 aaKnown RBP4.73□□□□□ -1.65
SDC4P-201ENST00000453285 KLK9Q9UKQ9 250 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 MOB4Q9Y3A3 225 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 LSM4Q9Y4Z0 139 aaKnown RBP4.73□□□□□ -1.65
SDC4P-201ENST00000453285 F11RQ9Y624 299 aaKnown RBP4.73□□□□□ -1.65
SDC4P-201ENST00000453285 MTORP42345 2549 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 OTOGQ6ZRI0 2925 aa4.73□□□□□ -1.65
SDC4P-201ENST00000453285 IGKV1OR2-108A0A075B7D4 117 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 LINC00862A6NCI5 91 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 NPIPB5A8MRT5 1133 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 I3L2K1 104 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 ATP6V0E1O15342 81 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 FGF7P21781 194 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 CRIP2P52943 208 aaPredicted RBP4.72□□□□□ -1.65
SDC4P-201ENST00000453285 BLCAPP62952 87 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 GAMTQ14353 236 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 EIF5AL1Q6IS14 154 aaKnown RBP4.72□□□□□ -1.65
SDC4P-201ENST00000453285 BTNL8Q6UX41 500 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 Q6ZS46 218 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 IL17RELQ6ZVW7 336 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 TMEM144Q7Z5S9 345 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 MRPL41Q8IXM3 137 aaKnown RBP4.72□□□□□ -1.65
SDC4P-201ENST00000453285 SLC7A5P1Q8MH63 180 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 LFNGQ8NES3 379 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 OR2G3Q8NGZ4 309 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 OR2T6Q8NHC8 308 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 SGMS2Q8NHU3 365 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 SCGB1C1Q8TD33 95 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 ABHD5Q8WTS1 349 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 RNF141Q8WVD5 230 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 CACNG8Q8WXS5 425 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 GNPNAT1Q96EK6 184 aaPredicted RBP4.72□□□□□ -1.65
SDC4P-201ENST00000453285 FANCD2OSQ96PS1 177 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 MGST2Q99735 147 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 PSMG3Q9BT73 122 aaPredicted RBP4.72□□□□□ -1.65
SDC4P-201ENST00000453285 YAE1D1Q9NRH1 226 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 PITPNC1Q9UKF7 332 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 TIMM9Q9Y5J7 89 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 HIVEP1P15822 2718 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 HIVEP2P31629 2446 aa4.72□□□□□ -1.65
SDC4P-201ENST00000453285 IGLV11-55A0A075B6I3 123 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 IGKV1D-37A0A075B6S9 117 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 G3V318 75 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 K7EIM0 57 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 M0QZK8 103 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 MPDU1O75352 247 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 IGHV3-48P01763 117 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 IGHG2P01859 326 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 PRH1P02810 166 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 RAB14P61106 215 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 SERF2P84101 59 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 AKIRIN2Q53H80 203 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 SLC25A24Q6NUK1 477 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 ACSM6Q6P461 480 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 TMEM182Q6ZP80 229 aaPredicted RBP4.71□□□□□ -1.66
SDC4P-201ENST00000453285 SLC16A13Q7RTY0 426 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 TEX29Q8N6K0 151 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 SIGLECL1Q8N7X8 197 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 THAP8Q8NA92 274 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 OR5T1Q8NG75 326 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 OR5R1Q8NH85 324 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 LYPD6BQ8NI32 183 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 FAM110DQ8TAY7 271 aaPredicted RBP4.71□□□□□ -1.66
SDC4P-201ENST00000453285 LRRC20Q8TCA0 184 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 SAT2Q96F10 170 aaPredicted RBP4.71□□□□□ -1.66
SDC4P-201ENST00000453285 MISP3Q96FF7 219 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 CXorf58Q96LI9 332 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 TMEM68Q96MH6 324 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 SMR3AQ99954 134 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 GGTLC1Q9BX51 225 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 NPCDR1Q9BY65 106 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 VSIRQ9H7M9 311 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 PARP11Q9NR21 331 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 MED9Q9NWA0 146 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 TMEM160Q9NX00 188 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 SLC45A2Q9UMX9 530 aa4.71□□□□□ -1.66
SDC4P-201ENST00000453285 TRBV9A0A0B4J1U6 114 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 SMCO3A2RU48 225 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 ZNF705EA8MWA4 302 aaPredicted RBP4.7□□□□□ -1.66
SDC4P-201ENST00000453285 UMAD1C9J7I0 102 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 TRIM77I1YAP6 450 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 CORTO00230 105 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 AGPAT2O15120 278 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 HOXA3O43365 443 aaPredicted RBP4.7□□□□□ -1.66
SDC4P-201ENST00000453285 SOX15O60248 233 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 YIF1AO95070 293 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 NDUFB8O95169 186 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms