RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PLA2G2AP14555 144 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 CSN1S1P47710 185 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF136P52737 540 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 CMC4P56277 68 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 EIF5AP63241 154 aaKnown RBP3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 FAM78AQ5JUQ0 283 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 FAAP20Q6NZ36 180 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF525Q8N782 197 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 DAND5Q8N907 189 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 OR5D14Q8NGL3 314 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 STAG3L4Q8TBR4 150 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF414Q96IQ9 312 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 OR4C12Q96R67 309 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 SHANK2-AS3Q9BTD1 123 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 BANF2Q9H503 90 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 C8orf17Q9NRJ1 99 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 IL36BQ9NZH7 164 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF581Q9P0T4 197 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF580Q9UK33 172 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 CELA1Q9UNI1 258 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 FUT9Q9Y231 359 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 RNF11Q9Y3C5 154 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 TSPOAP1O95153 1857 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 RALGAPA2Q2PPJ7 1873 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 CHD4Q14839 1912 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 FOCADQ5VW36 1801 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 ADGBQ8N7X0 1667 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 SPATA31E1Q6ZUB1 1445 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 IGHV3OR15-7A0A075B7D8 119 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 TRAV13-1A0A0B4J241 112 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 IGHV5-51A0A0C4DH38 117 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 H0YJW9 148 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 H3BMG7 143 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 TMEM256-PLSCR3K7ERE1 68 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 RPL22P35268 128 aaKnown RBP3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 UBE2BP63146 152 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 MEF2BQ02080 365 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 AMTNQ6UX39 209 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF329Q86UD4 541 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF440Q8IYI8 595 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 C3orf22Q8N5N4 141 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 ADAT1Q9BUB4 502 aaKnown RBP3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 DERL1Q9BUN8 251 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 SNHG12Q9BXW3 62 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 LHX9Q9NQ69 397 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 SLC39A9Q9NUM3 307 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 CCDC167Q9P0B6 97 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 ARHGEF11O15085 1522 aa3.14□□□□□ -1.91
HMGB3P21-201ENST00000452483 CDK5RAP2Q96SN8 1893 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 ARHGAP31Q2M1Z3 1444 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 ADAMTS13Q76LX8 1427 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 IGLV11-55A0A075B6I3 123 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 IGHV5-10-1A0A0J9YXX1 117 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 A0A1B0GUV1 79 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 A8MWP6 167 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 A8MWV9 139 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 EPM2AB3EWF7 344 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 BUB1B-PAK6H3BSN5 160 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 K7ERS5 55 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 SOCS1O15524 211 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF324O75467 553 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 INSP01308 110 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 APCSP02743 223 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 CXCL1P09341 107 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 T-ENOLP0DO92 83 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 CRYGSP22914 178 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 AKR1C2P52895 323 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 FOXA3P55318 350 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 TPPP2P59282 170 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 S100A10P60903 97 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 YPEL3P61236 119 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 RHOGP84095 191 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 MYL5Q02045 173 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 HSD52Q0P140 79 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 RNASE13Q5GAN3 156 aaKnown RBP3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 SPANXN3Q5MJ09 141 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 LCN15Q6UWW0 184 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 Q8N377 158 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 C9orf62Q8N4C0 152 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 C10orf126Q8N4M7 172 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 OR8D4Q8NGM9 314 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 RNASE6Q93091 150 aaKnown RBP3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 SLC25A46Q96AG3 418 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 PLA2G12AQ9BZM1 189 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 SCRT2Q9NQ03 307 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 SCP2D1Q9UJQ7 156 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 BCL9LQ86UU0 1499 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 ARHGAP23Q9P227 1491 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 MBD5Q9P267 1494 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 DSPPQ9NZW4 1301 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 PLXND1Q9Y4D7 1925 aa3.13□□□□□ -1.91
HMGB3P21-201ENST00000452483 TRAPPC8Q9Y2L5 1435 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 TRAV27A0A087WT01 109 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 A0A0G2JMM0 328 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 FAM236AA0A1B0GUQ0 79 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 FAM236BA0A1B0GV22 79 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 A0A1W2PPB8 328 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 C7orf71A4D174 169 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 KIR3DP1A8MWS1 328 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms