RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 NAA60Q9H7X0 242 aa13.49□□□□□ -0.25
CTNS-204ENST00000452111 MRPL27Q9P0M9 148 aaKnown RBP13.49□□□□□ -0.25
CTNS-204ENST00000452111 DNAH7Q8WXX0 4024 aa13.48□□□□□ -0.25
CTNS-204ENST00000452111 OR11H12B2RN74 326 aa13.48□□□□□ -0.25
CTNS-204ENST00000452111 I3L2K1 104 aa13.48□□□□□ -0.25
CTNS-204ENST00000452111 NDUFA4O00483 81 aa13.48□□□□□ -0.25
CTNS-204ENST00000452111 B3GALNT1O75752 331 aa13.48□□□□□ -0.25
CTNS-204ENST00000452111 MT-CO2P00403 227 aa13.48□□□□□ -0.25
CTNS-204ENST00000452111 IGHV3-48P01763 117 aa13.48□□□□□ -0.25
CTNS-204ENST00000452111 C8orf88P0DMB2 117 aa13.48□□□□□ -0.25
CTNS-204ENST00000452111 ADMP35318 185 aa13.48□□□□□ -0.25
CTNS-204ENST00000452111 SURF2Q15527 256 aaPredicted RBP13.48□□□□□ -0.25
CTNS-204ENST00000452111 NXF2Q9GZY0 626 aaKnown RBP13.48□□□□□ -0.25
CTNS-204ENST00000452111 TMEM222Q9H0R3 208 aa13.48□□□□□ -0.25
CTNS-204ENST00000452111 DAZ1Q9NQZ3 744 aaKnown RBP13.48□□□□□ -0.25
CTNS-204ENST00000452111 ZNF207O43670 478 aaKnown RBP13.47□□□□□ -0.25
CTNS-204ENST00000452111 ETV6P41212 452 aa13.47□□□□□ -0.25
CTNS-204ENST00000452111 HOXA1P49639 335 aaPredicted RBP13.47□□□□□ -0.25
CTNS-204ENST00000452111 RBPMS2Q6ZRY4 209 aaKnown RBP13.47□□□□□ -0.25
CTNS-204ENST00000452111 SLC16A13Q7RTY0 426 aa13.47□□□□□ -0.25
CTNS-204ENST00000452111 OR52B4Q8NGK2 314 aa13.47□□□□□ -0.25
CTNS-204ENST00000452111 LHFPL5Q8TAF8 219 aa13.47□□□□□ -0.25
CTNS-204ENST00000452111 SOSTQ9BQB4 213 aa13.47□□□□□ -0.25
CTNS-204ENST00000452111 SPATA25Q9BR10 227 aa13.47□□□□□ -0.25
CTNS-204ENST00000452111 SRD5A3Q9H8P0 318 aa13.47□□□□□ -0.25
CTNS-204ENST00000452111 MCUBQ9NWR8 336 aa13.47□□□□□ -0.25
CTNS-204ENST00000452111 GPR132Q9UNW8 380 aa13.47□□□□□ -0.25
CTNS-204ENST00000452111 NUPL2O15504 423 aaKnown RBP13.46□□□□□ -0.25
CTNS-204ENST00000452111 CDS2O95674 445 aa13.46□□□□□ -0.25
CTNS-204ENST00000452111 CTSGP08311 255 aa13.46□□□□□ -0.25
CTNS-204ENST00000452111 SNCAP37840 140 aa13.46□□□□□ -0.25
CTNS-204ENST00000452111 MFAP4P55083 255 aa13.46□□□□□ -0.25
CTNS-204ENST00000452111 GLYATL2Q8WU03 294 aa13.46□□□□□ -0.25
CTNS-204ENST00000452111 GAR1Q9NY12 217 aaKnown RBP13.46□□□□□ -0.25
CTNS-204ENST00000452111 CRYM-AS1A6NIL9 109 aa13.45□□□□□ -0.26
CTNS-204ENST00000452111 YIF1AO95070 293 aa13.45□□□□□ -0.26
CTNS-204ENST00000452111 RELQ04864 619 aaPredicted RBP13.45□□□□□ -0.26
CTNS-204ENST00000452111 TMEM268Q5VZI3 342 aa13.45□□□□□ -0.26
CTNS-204ENST00000452111 Q6ZRM9 215 aa13.45□□□□□ -0.26
CTNS-204ENST00000452111 RBPMSQ93062 196 aaKnown RBP13.45□□□□□ -0.26
CTNS-204ENST00000452111 ENY2Q9NPA8 101 aa13.45□□□□□ -0.26
CTNS-204ENST00000452111 SCP2D1Q9UJQ7 156 aa13.45□□□□□ -0.26
CTNS-204ENST00000452111 TRAV25A0A0B4J276 109 aa13.44□□□□□ -0.26
CTNS-204ENST00000452111 RBMY1BA6NDE4 496 aaKnown RBP13.44□□□□□ -0.26
CTNS-204ENST00000452111 RBMY1EA6NEQ0 496 aaKnown RBP13.44□□□□□ -0.26
CTNS-204ENST00000452111 INS-IGF2F8WCM5 200 aa13.44□□□□□ -0.26
CTNS-204ENST00000452111 GNG7O60262 68 aa13.44□□□□□ -0.26
CTNS-204ENST00000452111 RBMY1DP0C7P1 496 aaKnown RBP13.44□□□□□ -0.26
CTNS-204ENST00000452111 FCGR2BP31994 310 aaPredicted RBP13.44□□□□□ -0.26
CTNS-204ENST00000452111 DHODHQ02127 395 aa13.44□□□□□ -0.26
CTNS-204ENST00000452111 ANKRD55Q3KP44 614 aa13.44□□□□□ -0.26
CTNS-204ENST00000452111 PYDC2Q56P42 97 aa13.44□□□□□ -0.26
CTNS-204ENST00000452111 LINC00322Q6ZN03 302 aaPredicted RBP13.44□□□□□ -0.26
CTNS-204ENST00000452111 FAM219AQ8IW50 185 aa13.44□□□□□ -0.26
CTNS-204ENST00000452111 SELENOHQ8IZQ5 122 aaKnown RBP13.44□□□□□ -0.26
CTNS-204ENST00000452111 MUC7Q8TAX7 377 aa13.44□□□□□ -0.26
CTNS-204ENST00000452111 ZNF414Q96IQ9 312 aa13.44□□□□□ -0.26
CTNS-204ENST00000452111 TXN2Q99757 166 aa13.44□□□□□ -0.26
CTNS-204ENST00000452111 RETNQ9HD89 108 aa13.44□□□□□ -0.26
CTNS-204ENST00000452111 PRR13Q9NZ81 148 aa13.44□□□□□ -0.26
CTNS-204ENST00000452111 C15orf62A8K5M9 175 aa13.43□□□□□ -0.26
CTNS-204ENST00000452111 C3orf84H3BNL1 204 aa13.43□□□□□ -0.26
CTNS-204ENST00000452111 RNASE2P10153 161 aaKnown RBP13.43□□□□□ -0.26
CTNS-204ENST00000452111 TMEM230Q96A57 120 aa13.43□□□□□ -0.26
CTNS-204ENST00000452111 GPR146Q96CH1 333 aa13.43□□□□□ -0.26
CTNS-204ENST00000452111 CITED4Q96RK1 184 aa13.43□□□□□ -0.26
CTNS-204ENST00000452111 CACNG5Q9UF02 275 aa13.43□□□□□ -0.26
CTNS-204ENST00000452111 NBEAL2Q6ZNJ1 2754 aa13.43□□□□□ -0.26
CTNS-204ENST00000452111 K7EMT4 169 aa13.42□□□□□ -0.26
CTNS-204ENST00000452111 SUB1P53999 127 aaKnown RBP eCLIP13.42□□□□□ -0.26
CTNS-204ENST00000452111 DUSP18Q8NEJ0 188 aa13.42□□□□□ -0.26
CTNS-204ENST00000452111 SCGB3A2Q96PL1 93 aa13.42□□□□□ -0.26
CTNS-204ENST00000452111 SPAG8Q99932 426 aaPredicted RBP13.42□□□□□ -0.26
CTNS-204ENST00000452111 RBM38Q9H0Z9 239 aaKnown RBP13.42□□□□□ -0.26
CTNS-204ENST00000452111 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.42□□□□□ -0.26
CTNS-204ENST00000452111 V9GYH0 126 aa13.42□□□□□ -0.26
CTNS-204ENST00000452111 IGHV3-49A0A0A0MS15 119 aa13.41□□□□□ -0.26
CTNS-204ENST00000452111 AKR1C4P17516 323 aa13.41□□□□□ -0.26
CTNS-204ENST00000452111 S100A5P33763 92 aa13.41□□□□□ -0.26
CTNS-204ENST00000452111 NPBWR1P48145 328 aa13.41□□□□□ -0.26
CTNS-204ENST00000452111 SPCS3P61009 180 aa13.41□□□□□ -0.26
CTNS-204ENST00000452111 KLF9Q13886 244 aaPredicted RBP13.41□□□□□ -0.26
CTNS-204ENST00000452111 LAMTOR1Q6IAA8 161 aa13.41□□□□□ -0.26
CTNS-204ENST00000452111 TRIM63Q969Q1 353 aa13.41□□□□□ -0.26
CTNS-204ENST00000452111 FAM110AQ9BQ89 295 aa13.41□□□□□ -0.26
CTNS-204ENST00000452111 HIPK2Q9H2X6 1198 aa13.41□□□□□ -0.26
CTNS-204ENST00000452111 TMEM56-RWDD3S4R434 201 aa13.41□□□□□ -0.26
CTNS-204ENST00000452111 RYR3Q15413 4870 aa13.41□□□□□ -0.26
CTNS-204ENST00000452111 CORTO00230 105 aa13.4□□□□□ -0.26
CTNS-204ENST00000452111 TSPAN4O14817 238 aa13.4□□□□□ -0.26
CTNS-204ENST00000452111 NXPH3O95157 252 aa13.4□□□□□ -0.26
CTNS-204ENST00000452111 FAUP35544 74 aaKnown RBP13.4□□□□□ -0.26
CTNS-204ENST00000452111 OPRK1P41145 380 aa13.4□□□□□ -0.26
CTNS-204ENST00000452111 TMEM187Q14656 261 aa13.4□□□□□ -0.26
CTNS-204ENST00000452111 AARDQ4LEZ3 155 aa13.4□□□□□ -0.26
CTNS-204ENST00000452111 PVRIGQ6DKI7 326 aa13.4□□□□□ -0.26
CTNS-204ENST00000452111 TOMM5Q8N4H5 51 aa13.4□□□□□ -0.26
CTNS-204ENST00000452111 OR52E5Q8NH55 327 aa13.4□□□□□ -0.26
CTNS-204ENST00000452111 GALNT14Q96FL9 552 aa13.4□□□□□ -0.26
CTNS-204ENST00000452111 EDA2RQ9HAV5 297 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms