RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 IGHV3-20A0A0C4DH32 117 aa7.09□□□□□ -1.27
LSM5-208ENST00000450169 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.09□□□□□ -1.27
LSM5-208ENST00000450169 FAM229AH3BQW9 127 aa7.09□□□□□ -1.27
LSM5-208ENST00000450169 ZIC3O60481 467 aa7.09□□□□□ -1.27
LSM5-208ENST00000450169 RPL30P62888 115 aaKnown RBP7.09□□□□□ -1.27
LSM5-208ENST00000450169 GUSBP1Q15486 140 aa7.09□□□□□ -1.27
LSM5-208ENST00000450169 DHRS13Q6UX07 377 aa7.09□□□□□ -1.27
LSM5-208ENST00000450169 MOB1BQ7L9L4 216 aa7.09□□□□□ -1.27
LSM5-208ENST00000450169 ATP5L2Q7Z4Y8 100 aa7.09□□□□□ -1.27
LSM5-208ENST00000450169 GRAMD2BQ96HH9 432 aa7.09□□□□□ -1.27
LSM5-208ENST00000450169 FGF23Q9GZV9 251 aaPredicted RBP7.09□□□□□ -1.27
LSM5-208ENST00000450169 TMEM167BQ9NRX6 74 aa7.09□□□□□ -1.27
LSM5-208ENST00000450169 BOKQ9UMX3 212 aaPredicted RBP7.09□□□□□ -1.27
LSM5-208ENST00000450169 R4GN57 208 aa7.09□□□□□ -1.27
LSM5-208ENST00000450169 IGHV3-15A0A0B4J1V0 119 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 IGHV5-51A0A0C4DH38 117 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 HIGD1CA8MV81 97 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 GGTLC3B5MD39 225 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 SYNGR1O43759 233 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 WISP2O76076 250 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 CA6P23280 308 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 CATR1Q13166 79 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 PRR31Q5SQ13 230 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 TIMM23BQ5SRD1 257 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 PRAMEF5Q5TYX0 476 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 PRAMEF6Q5VXH4 476 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 SNRNP40Q96DI7 357 aaKnown RBP7.08□□□□□ -1.28
LSM5-208ENST00000450169 METTL7AQ9H8H3 244 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 DLL3Q9NYJ7 618 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 IDI2-AS1Q9NZ38 188 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 MED12LQ86YW9 2145 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 DIDO1Q9BTC0 2240 aaKnown RBP7.08□□□□□ -1.28
LSM5-208ENST00000450169 ZNF407Q9C0G0 2248 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 A0A1B0GXF2 115 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 A1L4Q6 167 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 C17orf98A8MV24 154 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 OR11H12B2RN74 326 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 LINC01565O15544 149 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 B4GALT1P15291 398 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 FCGR2BP31994 310 aaPredicted RBP7.08□□□□□ -1.28
LSM5-208ENST00000450169 TMPRSS3P57727 454 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 C1orf61Q13536 156 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 RUNX3Q13761 415 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 CT83Q5H943 113 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 TRAT1Q6PIZ9 186 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 Q6ZR03 302 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 FAM231DQ6ZW35 169 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 MIR17HGQ75NE6 70 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 FAM214BQ7L5A3 538 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 ZNF808Q8N4W9 903 aaPredicted RBP7.08□□□□□ -1.28
LSM5-208ENST00000450169 TEX45Q8NA69 505 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 OR11H1Q8NG94 326 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 OR9G4Q8NGQ1 327 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 OR11H2Q8NH07 326 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 DPF1Q92782 380 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 ADTRPQ96IZ2 230 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 ZNF488Q96MN9 340 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 VGLL1Q99990 258 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 ZMAT4Q9H898 229 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 SH2D2AQ9NP31 389 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 SLC25A10Q9UBX3 287 aaPredicted RBP7.08□□□□□ -1.28
LSM5-208ENST00000450169 TRAPPC2LQ9UL33 140 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 LSM4Q9Y4Z0 139 aaKnown RBP7.08□□□□□ -1.28
LSM5-208ENST00000450169 TNRC18O15417 2968 aaPredicted RBP7.08□□□□□ -1.28
LSM5-208ENST00000450169 LRP4O75096 1905 aa7.08□□□□□ -1.28
LSM5-208ENST00000450169 MED12Q93074 2177 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 PCDH15Q96QU1 1955 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 IGLV3-32A0A0A0MS00 114 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 PRSS46E5RG02 174 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 KLRC4-KLRK1H3BQV0 150 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 KLF7O75840 302 aaPredicted RBP7.07□□□□□ -1.28
LSM5-208ENST00000450169 ACTL6BO94805 426 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 CYC1P08574 325 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 CCNOP22674 350 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 GFERP55789 205 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 YPEL5P62699 121 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 RTL8BQ17RB0 113 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 SHISA2Q6UWI4 295 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 BOD1L2Q8IYS8 172 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 OR1L3Q8NH93 324 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 RNF138Q8WVD3 245 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 DUSP23Q9BVJ7 150 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 COL25A1Q9BXS0 654 aaPredicted RBP7.07□□□□□ -1.28
LSM5-208ENST00000450169 PLEKHA3Q9HB20 300 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 LOXL2Q9Y4K0 774 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 VWC2LB2RUY7 222 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 F8W1H4 67 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 ZNF561-AS1K7EIQ3 104 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 IGHV3-7P01780 117 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 FAM87AP0C7U9 286 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 FKBP2P26885 142 aaKnown RBP7.07□□□□□ -1.28
LSM5-208ENST00000450169 BRWD1-AS2P59051 145 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 HBBP68871 147 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 ACP7Q6ZNF0 438 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 SLC22A18ASQ8N1D0 253 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 OR4X2Q8NGF9 303 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 SPAG8Q99932 426 aaPredicted RBP7.07□□□□□ -1.28
LSM5-208ENST00000450169 C1QTNF5Q9BXJ0 243 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 PLA2G2FQ9BZM2 168 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 OR2H1Q9GZK4 316 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms