RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 CMTM1Q8IZ96 169 aa9.15□□□□□ -0.94
AC004540.1-204ENST00000449537 ZFAND1Q8TCF1 268 aa9.15□□□□□ -0.94
AC004540.1-204ENST00000449537 AGMATQ9BSE5 352 aa9.15□□□□□ -0.94
AC004540.1-204ENST00000449537 NDUFAF3Q9BU61 184 aa9.15□□□□□ -0.94
AC004540.1-204ENST00000449537 TRBV9A0A0B4J1U6 114 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 A8MWP6 167 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 M0QYG6 137 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 ST8SIA5O15466 376 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 AMBPP02760 352 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 IGKV1-16P04430 117 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 RLN1P04808 185 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 HNRNPCP07910 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 NFYAP23511 347 aaPredicted RBP9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 CATR1Q13166 79 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 ODF3L2Q3SX64 289 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 ZNF585BQ52M93 769 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 UBE2DNLQ8IWF7 75 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 CCDC71LQ8N9Z2 235 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 NECAP1Q8NC96 275 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 OR51S1Q8NGJ8 323 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 CD300LFQ8TDQ1 290 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 CHAC2Q8WUX2 184 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 MARC2Q969Z3 335 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 HSD17B10Q99714 261 aaKnown RBP9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 FXYD6Q9H0Q3 95 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 OR2D2Q9H210 308 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 ALG5Q9Y673 324 aa9.14□□□□□ -0.95
AC004540.1-204ENST00000449537 DEFB131BA0A096LNP1 70 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 GPR31O00270 319 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 MPPED1O15442 326 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 CREBL2O60519 120 aaPredicted RBP9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 S1PR2O95136 353 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 ZNF735P0CB33 412 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 C8orf88P0DMB2 117 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 UBE2MP61081 183 aaKnown RBP9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 RND3P61587 244 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 C15orf32Q32M92 178 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 AADACL3Q5VUY0 350 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 FAAP20Q6NZ36 180 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 ZNF66Q6ZN08 573 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 CADM3Q8N126 398 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 DRAXINQ8NBI3 349 aaPredicted RBP9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 OR4D10Q8NGI6 311 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 SLC5A7Q9GZV3 580 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 MED28Q9H204 178 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 C5orf66Q9H5L9 145 aa9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 FAM212BQ9NTI7 297 aaPredicted RBP9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 MRPL27Q9P0M9 148 aaKnown RBP9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 C14orf166Q9Y224 244 aaKnown RBP9.13□□□□□ -0.95
AC004540.1-204ENST00000449537 FLG2Q5D862 2391 aaPredicted RBP9.12□□□□□ -0.95
AC004540.1-204ENST00000449537 HMX3A6NHT5 357 aa9.12□□□□□ -0.95
AC004540.1-204ENST00000449537 TSPAN4O14817 238 aa9.12□□□□□ -0.95
AC004540.1-204ENST00000449537 SSNA1O43805 119 aa9.12□□□□□ -0.95
AC004540.1-204ENST00000449537 CTSDP07339 412 aaPredicted RBP9.12□□□□□ -0.95
AC004540.1-204ENST00000449537 RRASP10301 218 aa9.12□□□□□ -0.95
AC004540.1-204ENST00000449537 ARL3P36405 182 aa9.12□□□□□ -0.95
AC004540.1-204ENST00000449537 FXYD4P59646 89 aa9.12□□□□□ -0.95
AC004540.1-204ENST00000449537 CBX3Q13185 183 aa9.12□□□□□ -0.95
AC004540.1-204ENST00000449537 TMEM187Q14656 261 aa9.12□□□□□ -0.95
AC004540.1-204ENST00000449537 SECTM1Q8WVN6 248 aa9.12□□□□□ -0.95
AC004540.1-204ENST00000449537 ABHD14BQ96IU4 210 aa9.12□□□□□ -0.95
AC004540.1-204ENST00000449537 IGKV1D-13A0A0B4J2D9 117 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 C7orf66A4D0T2 115 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 SNRPGP15A8MWD9 76 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 RBFOX2O43251 390 aaKnown RBP eCLIP9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 CCNKO75909 580 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 OR2J3O76001 311 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 APOA2P02652 100 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 IL5P05113 134 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 CRYGBP07316 175 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 IGKV1-13P0DP09 117 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 PGAM2P15259 253 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 RRAS2P62070 204 aaPredicted RBP9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 C4orf46Q504U0 113 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 LAMTOR1Q6IAA8 161 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 KCTD9Q7L273 389 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 PDPNQ86YL7 162 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 APRG1Q8IVJ8 170 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 OR13C8Q8NGS7 320 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 SLC2A9Q9NRM0 540 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 SDHAF2Q9NX18 166 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 PRELID3BQ9Y3B1 194 aa9.11□□□□□ -0.95
AC004540.1-204ENST00000449537 OR4C46A6NHA9 309 aa9.1□□□□□ -0.95
AC004540.1-204ENST00000449537 J3QL48 77 aa9.1□□□□□ -0.95
AC004540.1-204ENST00000449537 IGLV2-23P01705 113 aa9.1□□□□□ -0.95
AC004540.1-204ENST00000449537 RBMY1CP0DJD4 496 aa9.1□□□□□ -0.95
AC004540.1-204ENST00000449537 RTL8BQ17RB0 113 aa9.1□□□□□ -0.95
AC004540.1-204ENST00000449537 CLEC19AQ6UXS0 136 aa9.1□□□□□ -0.95
AC004540.1-204ENST00000449537 ZNF818PQ6ZRF7 136 aa9.1□□□□□ -0.95
AC004540.1-204ENST00000449537 TMED4Q7Z7H5 227 aa9.1□□□□□ -0.95
AC004540.1-204ENST00000449537 Q8NAQ8 132 aa9.1□□□□□ -0.95
AC004540.1-204ENST00000449537 CHRDL1Q9BU40 450 aa9.1□□□□□ -0.95
AC004540.1-204ENST00000449537 M0R1X1 148 aa9.09□□□□□ -0.95
AC004540.1-204ENST00000449537 IGHV3-23P01764 117 aa9.09□□□□□ -0.95
AC004540.1-204ENST00000449537 ANXA3P12429 323 aa9.09□□□□□ -0.95
AC004540.1-204ENST00000449537 RPA2P15927 270 aa9.09□□□□□ -0.95
AC004540.1-204ENST00000449537 GNRHRP30968 328 aa9.09□□□□□ -0.95
AC004540.1-204ENST00000449537 SRPXP78539 464 aa9.09□□□□□ -0.95
AC004540.1-204ENST00000449537 SPATA12Q7Z6I5 190 aa9.09□□□□□ -0.95
AC004540.1-204ENST00000449537 ZNF383Q8NA42 475 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms