RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 FNDC10F2Z333 226 aa15.13■□□□□ 0.01
RPS28-202ENST00000449223 ATP6V1FQ16864 119 aa15.13■□□□□ 0.01
RPS28-202ENST00000449223 C9orf152Q5JTZ5 239 aa15.13■□□□□ 0.01
RPS28-202ENST00000449223 OR1S2Q8NGQ3 325 aa15.13■□□□□ 0.01
RPS28-202ENST00000449223 ARPC5LQ9BPX5 153 aa15.13■□□□□ 0.01
RPS28-202ENST00000449223 WNT10AQ9GZT5 417 aa15.13■□□□□ 0.01
RPS28-202ENST00000449223 TRAV41A0A0B4J266 112 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 KANTRA0A1W2PQU2 76 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 IFNA4P05014 189 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 PPIFP30405 207 aaKnown RBP15.12■□□□□ 0.01
RPS28-202ENST00000449223 UBA52P62987 128 aaKnown RBP15.12■□□□□ 0.01
RPS28-202ENST00000449223 SLC38A11Q08AI6 406 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 OPCMLQ14982 345 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 VWC2Q2TAL6 325 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 OR8G2PQ6IF36 304 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 UNQ5815/PRO19632Q6UWF5 114 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 TMEM217Q8N7C4 229 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 CACNG8Q8WXS5 425 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 CYTL1Q9NRR1 136 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 IGLV11-55A0A075B6I3 123 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 FAM181BA6NEQ2 426 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 TSPAN9O75954 239 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 DLK1P80370 383 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 CFHR3Q02985 330 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 EXOSC2Q13868 293 aaKnown RBP15.12■□□□□ 0.01
RPS28-202ENST00000449223 ECSCRQ19T08 205 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 FANCD2OSQ96PS1 177 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 PAIP2BQ9ULR5 123 aaKnown RBP15.12■□□□□ 0.01
RPS28-202ENST00000449223 BOLA1Q9Y3E2 137 aa15.12■□□□□ 0.01
RPS28-202ENST00000449223 G3V318 75 aa15.11■□□□□ 0.01
RPS28-202ENST00000449223 CYB5BO43169 146 aa15.11■□□□□ 0.01
RPS28-202ENST00000449223 DFFBO76075 338 aa15.11■□□□□ 0.01
RPS28-202ENST00000449223 GPX4P36969 197 aaPredicted RBP15.11■□□□□ 0.01
RPS28-202ENST00000449223 CD69Q07108 199 aa15.11■□□□□ 0.01
RPS28-202ENST00000449223 C19orf35Q6ZS72 473 aa15.11■□□□□ 0.01
RPS28-202ENST00000449223 ATP5SQ99766 215 aa15.11■□□□□ 0.01
RPS28-202ENST00000449223 TRBV9A0A0B4J1U6 114 aa15.1■□□□□ 0.01
RPS28-202ENST00000449223 H3BUA1 57 aa15.1■□□□□ 0.01
RPS28-202ENST00000449223 SOX15O60248 233 aa15.1■□□□□ 0.01
RPS28-202ENST00000449223 DEFA4P12838 97 aa15.1■□□□□ 0.01
RPS28-202ENST00000449223 ZNF266Q14584 549 aa15.1■□□□□ 0.01
RPS28-202ENST00000449223 LILRB2Q8N423 598 aa15.1■□□□□ 0.01
RPS28-202ENST00000449223 UBAC2Q8NBM4 344 aa15.1■□□□□ 0.01
RPS28-202ENST00000449223 GON7Q9BXV9 100 aa15.1■□□□□ 0.01
RPS28-202ENST00000449223 PARD6GQ9BYG4 376 aaPredicted RBP15.1■□□□□ 0.01
RPS28-202ENST00000449223 WFDC1Q9HC57 220 aa15.1■□□□□ 0.01
RPS28-202ENST00000449223 JTBO76095 146 aa15.09■□□□□ 0.01
RPS28-202ENST00000449223 HIST1H1BP16401 226 aaKnown RBP15.09■□□□□ 0.01
RPS28-202ENST00000449223 CLINT1Q14677 625 aa15.09■□□□□ 0.01
RPS28-202ENST00000449223 SLC51BQ86UW2 128 aa15.09■□□□□ 0.01
RPS28-202ENST00000449223 STOML3Q8TAV4 291 aa15.09■□□□□ 0.01
RPS28-202ENST00000449223 TMEM147Q9BVK8 224 aa15.09■□□□□ 0.01
RPS28-202ENST00000449223 SMIM3Q9BZL3 60 aa15.09■□□□□ 0.01
RPS28-202ENST00000449223 FNDC4Q9H6D8 234 aaPredicted RBP15.09■□□□□ 0.01
RPS28-202ENST00000449223 TCF21O43680 179 aa15.08■□□□□ 0.01
RPS28-202ENST00000449223 MDKP21741 143 aaPredicted RBP15.08■□□□□ 0.01
RPS28-202ENST00000449223 ARSJQ5FYB0 599 aaPredicted RBP15.08■□□□□ 0.01
RPS28-202ENST00000449223 ETFRF1Q6IPR1 90 aa15.08■□□□□ 0.01
RPS28-202ENST00000449223 OR5T1Q8NG75 326 aa15.08■□□□□ 0.01
RPS28-202ENST00000449223 NOL4LQ96MY1 436 aaPredicted RBP15.08■□□□□ 0.01
RPS28-202ENST00000449223 UQCC1Q9NVA1 299 aa15.08■□□□□ 0.01
RPS28-202ENST00000449223 THYN1Q9P016 225 aa15.08■□□□□ 0.01
RPS28-202ENST00000449223 I3L2K1 104 aa15.07■□□□□ 0
RPS28-202ENST00000449223 IGLV1-40P01703 118 aa15.07■□□□□ 0
RPS28-202ENST00000449223 RPL7L1Q6DKI1 246 aaKnown RBP15.07■□□□□ 0
RPS28-202ENST00000449223 SLC25A24Q6NUK1 477 aa15.07■□□□□ 0
RPS28-202ENST00000449223 Q6ZSV7 163 aa15.07■□□□□ 0
RPS28-202ENST00000449223 ARV1Q9H2C2 271 aa15.07■□□□□ 0
RPS28-202ENST00000449223 SERTAD4Q9NUC0 356 aa15.07■□□□□ 0
RPS28-202ENST00000449223 NIPBLQ6KC79 2804 aaeCLIP15.07■□□□□ 0
RPS28-202ENST00000449223 RPS10-NUDT3A0A1W2PQS6 291 aa15.07■□□□□ 0
RPS28-202ENST00000449223 TMEM89A2RUT3 159 aa15.07■□□□□ 0
RPS28-202ENST00000449223 K7EIM0 57 aa15.07■□□□□ 0
RPS28-202ENST00000449223 OPRK1P41145 380 aa15.07■□□□□ 0
RPS28-202ENST00000449223 TMEM95Q3KNT9 176 aa15.07■□□□□ 0
RPS28-202ENST00000449223 SLC16A13Q7RTY0 426 aa15.07■□□□□ 0
RPS28-202ENST00000449223 MISP3Q96FF7 219 aa15.07■□□□□ 0
RPS28-202ENST00000449223 ZNF471Q9BX82 626 aaPredicted RBP15.07■□□□□ 0
RPS28-202ENST00000449223 C16orf95Q9H693 158 aa15.07■□□□□ 0
RPS28-202ENST00000449223 LINC00527Q9UJ94 153 aa15.07■□□□□ 0
RPS28-202ENST00000449223 BORCS7-ASMTA0A0B4J1R7 106 aa15.06■□□□□ 0
RPS28-202ENST00000449223 IGHG4P01861 327 aa15.06■□□□□ 0
RPS28-202ENST00000449223 EIF5AP63241 154 aaKnown RBP15.06■□□□□ 0
RPS28-202ENST00000449223 TMEM116Q8NCL8 245 aa15.06■□□□□ 0
RPS28-202ENST00000449223 OR2T6Q8NHC8 308 aa15.06■□□□□ 0
RPS28-202ENST00000449223 SLA2Q9H6Q3 261 aa15.06■□□□□ 0
RPS28-202ENST00000449223 NPVFQ9HCQ7 196 aa15.06■□□□□ 0
RPS28-202ENST00000449223 LSM4Q9Y4Z0 139 aaKnown RBP15.06■□□□□ 0
RPS28-202ENST00000449223 MT-CO2P00403 227 aa15.05■□□□□ -0
RPS28-202ENST00000449223 PRH1P02810 166 aa15.05■□□□□ -0
RPS28-202ENST00000449223 GAMTQ14353 236 aa15.05■□□□□ -0
RPS28-202ENST00000449223 TREML4Q6UXN2 200 aa15.05■□□□□ -0
RPS28-202ENST00000449223 NECAP1Q8NC96 275 aa15.05■□□□□ -0
RPS28-202ENST00000449223 WDR61Q9GZS3 305 aaKnown RBP15.05■□□□□ -0
RPS28-202ENST00000449223 TEP1Q99973 2627 aaKnown RBP15.05■□□□□ -0
RPS28-202ENST00000449223 NDUFA7O95182 113 aa15.04■□□□□ -0
RPS28-202ENST00000449223 CRYBA1P05813 215 aa15.04■□□□□ -0
RPS28-202ENST00000449223 TPT1P13693 172 aaKnown RBP15.04■□□□□ -0
RPS28-202ENST00000449223 FCGR2BP31994 310 aaPredicted RBP15.04■□□□□ -0
RPS28-202ENST00000449223 TMEM144Q7Z5S9 345 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms