RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 IFNA4P05014 189 aa11.42□□□□□ -0.58
APP-210ENST00000448850 EIF2B2P49770 351 aaKnown RBP11.42□□□□□ -0.58
APP-210ENST00000448850 MFAP2P55001 183 aa11.42□□□□□ -0.58
APP-210ENST00000448850 NHLH2Q02577 135 aa11.42□□□□□ -0.58
APP-210ENST00000448850 PVRIGQ6DKI7 326 aa11.42□□□□□ -0.58
APP-210ENST00000448850 ETV3LQ6ZN32 361 aa11.42□□□□□ -0.58
APP-210ENST00000448850 TAF15Q92804 592 aaKnown RBP eCLIP11.42□□□□□ -0.58
APP-210ENST00000448850 PPIFP30405 207 aaKnown RBP11.42□□□□□ -0.58
APP-210ENST00000448850 NKX2-5P52952 324 aaPredicted RBP11.42□□□□□ -0.58
APP-210ENST00000448850 AP2S1P53680 142 aaPredicted RBP11.42□□□□□ -0.58
APP-210ENST00000448850 BAXQ07812 192 aa11.42□□□□□ -0.58
APP-210ENST00000448850 OR8G2PQ6IF36 304 aa11.42□□□□□ -0.58
APP-210ENST00000448850 SLC25A24Q6NUK1 477 aa11.42□□□□□ -0.58
APP-210ENST00000448850 HAPLN4Q86UW8 402 aa11.42□□□□□ -0.58
APP-210ENST00000448850 GON7Q9BXV9 100 aa11.42□□□□□ -0.58
APP-210ENST00000448850 SERTAD4Q9NUC0 356 aa11.42□□□□□ -0.58
APP-210ENST00000448850 HSPB11Q9Y547 144 aa11.42□□□□□ -0.58
APP-210ENST00000448850 DMRT1Q9Y5R6 373 aa11.42□□□□□ -0.58
APP-210ENST00000448850 CYB5BO43169 146 aa11.41□□□□□ -0.58
APP-210ENST00000448850 SOX15O60248 233 aa11.41□□□□□ -0.58
APP-210ENST00000448850 SCAF4O95104 1147 aaKnown RBP11.41□□□□□ -0.58
APP-210ENST00000448850 PRH1P02810 166 aa11.41□□□□□ -0.58
APP-210ENST00000448850 CXCL2P19875 107 aa11.41□□□□□ -0.58
APP-210ENST00000448850 SRSF2Q01130 221 aaKnown RBP11.41□□□□□ -0.58
APP-210ENST00000448850 CFHR3Q02985 330 aa11.41□□□□□ -0.58
APP-210ENST00000448850 OR2F1Q13607 317 aa11.41□□□□□ -0.58
APP-210ENST00000448850 ZNF345Q14585 488 aa11.41□□□□□ -0.58
APP-210ENST00000448850 PRSS46E5RG02 174 aa11.4□□□□□ -0.58
APP-210ENST00000448850 CORTO00230 105 aa11.4□□□□□ -0.58
APP-210ENST00000448850 NDUFA7O95182 113 aa11.4□□□□□ -0.58
APP-210ENST00000448850 ARL16Q0P5N6 197 aa11.4□□□□□ -0.58
APP-210ENST00000448850 KLK9Q2XQG4 91 aa11.4□□□□□ -0.58
APP-210ENST00000448850 LGALSLQ3ZCW2 172 aaPredicted RBP11.4□□□□□ -0.58
APP-210ENST00000448850 LURAP1LQ8IV03 231 aa11.4□□□□□ -0.58
APP-210ENST00000448850 TMEM217Q8N7C4 229 aa11.4□□□□□ -0.58
APP-210ENST00000448850 OR10P1Q8NGE3 313 aa11.4□□□□□ -0.58
APP-210ENST00000448850 RNASEH2CQ8TDP1 164 aaKnown RBP11.4□□□□□ -0.58
APP-210ENST00000448850 MISP3Q96FF7 219 aa11.4□□□□□ -0.58
APP-210ENST00000448850 FANCD2OSQ96PS1 177 aa11.4□□□□□ -0.58
APP-210ENST00000448850 C16orf95Q9H693 158 aa11.4□□□□□ -0.58
APP-210ENST00000448850 ZNF355PQ9NSJ1 428 aa11.4□□□□□ -0.58
APP-210ENST00000448850 KLK9Q9UKQ9 250 aa11.4□□□□□ -0.58
APP-210ENST00000448850 IGLV11-55A0A075B6I3 123 aa11.39□□□□□ -0.59
APP-210ENST00000448850 A0A0D9SG52 128 aa11.39□□□□□ -0.59
APP-210ENST00000448850 HBG1P69891 147 aa11.39□□□□□ -0.59
APP-210ENST00000448850 HBG2P69892 147 aa11.39□□□□□ -0.59
APP-210ENST00000448850 C9orf62Q8N4C0 152 aa11.39□□□□□ -0.59
APP-210ENST00000448850 KCNRGQ8N5I3 272 aa11.39□□□□□ -0.59
APP-210ENST00000448850 OR5C1Q8NGR4 320 aa11.39□□□□□ -0.59
APP-210ENST00000448850 BSCL2Q96G97 398 aaPredicted RBP11.39□□□□□ -0.59
APP-210ENST00000448850 IGLV1-40P01703 118 aa11.39□□□□□ -0.59
APP-210ENST00000448850 HIST1H1BP16401 226 aaKnown RBP11.39□□□□□ -0.59
APP-210ENST00000448850 S100A11P31949 105 aa11.39□□□□□ -0.59
APP-210ENST00000448850 SLC38A11Q08AI6 406 aa11.39□□□□□ -0.59
APP-210ENST00000448850 LAMTOR1Q6IAA8 161 aa11.39□□□□□ -0.59
APP-210ENST00000448850 OR1S2Q8NGQ3 325 aa11.39□□□□□ -0.59
APP-210ENST00000448850 PINX1Q96BK5 328 aaKnown RBP11.39□□□□□ -0.59
APP-210ENST00000448850 THYN1Q9P016 225 aa11.39□□□□□ -0.59
APP-210ENST00000448850 PRELID1Q9Y255 219 aa11.39□□□□□ -0.59
APP-210ENST00000448850 TRBV9A0A0B4J1U6 114 aa11.38□□□□□ -0.59
APP-210ENST00000448850 PSMB11A5LHX3 300 aa11.38□□□□□ -0.59
APP-210ENST00000448850 H3BUA1 57 aa11.38□□□□□ -0.59
APP-210ENST00000448850 BRI3O95415 125 aa11.38□□□□□ -0.59
APP-210ENST00000448850 IGHG4P01861 327 aa11.38□□□□□ -0.59
APP-210ENST00000448850 OPRK1P41145 380 aa11.38□□□□□ -0.59
APP-210ENST00000448850 SLC35B1P78383 322 aa11.38□□□□□ -0.59
APP-210ENST00000448850 CD69Q07108 199 aa11.38□□□□□ -0.59
APP-210ENST00000448850 EXOSC2Q13868 293 aaKnown RBP11.38□□□□□ -0.59
APP-210ENST00000448850 TMUB2Q71RG4 321 aa11.38□□□□□ -0.59
APP-210ENST00000448850 CENPVQ7Z7K6 275 aaPredicted RBP11.38□□□□□ -0.59
APP-210ENST00000448850 ZNF329Q86UD4 541 aa11.38□□□□□ -0.59
APP-210ENST00000448850 SMIM3Q9BZL3 60 aa11.38□□□□□ -0.59
APP-210ENST00000448850 FBXL17Q9UF56 701 aa11.38□□□□□ -0.59
APP-210ENST00000448850 OR2J3O76001 311 aa11.37□□□□□ -0.59
APP-210ENST00000448850 GPX4P36969 197 aaPredicted RBP11.37□□□□□ -0.59
APP-210ENST00000448850 MLANAQ16655 118 aa11.37□□□□□ -0.59
APP-210ENST00000448850 LINC01006Q8NI28 216 aa11.37□□□□□ -0.59
APP-210ENST00000448850 MS4A10Q96PG2 267 aa11.37□□□□□ -0.59
APP-210ENST00000448850 ARL6Q9H0F7 186 aa11.37□□□□□ -0.59
APP-210ENST00000448850 FNDC4Q9H6D8 234 aaPredicted RBP11.37□□□□□ -0.59
APP-210ENST00000448850 TMEM89A2RUT3 159 aa11.37□□□□□ -0.59
APP-210ENST00000448850 I3L2K1 104 aa11.37□□□□□ -0.59
APP-210ENST00000448850 MT-CO2P00403 227 aa11.37□□□□□ -0.59
APP-210ENST00000448850 PF4V1P10720 104 aa11.37□□□□□ -0.59
APP-210ENST00000448850 DLK1P80370 383 aa11.37□□□□□ -0.59
APP-210ENST00000448850 CLINT1Q14677 625 aa11.37□□□□□ -0.59
APP-210ENST00000448850 ATP6V1FQ16864 119 aa11.37□□□□□ -0.59
APP-210ENST00000448850 C10orf99Q6UWK7 81 aa11.37□□□□□ -0.59
APP-210ENST00000448850 NECAP1Q8NC96 275 aa11.37□□□□□ -0.59
APP-210ENST00000448850 OR4F5Q8NH21 305 aa11.37□□□□□ -0.59
APP-210ENST00000448850 CACNG8Q8WXS5 425 aa11.37□□□□□ -0.59
APP-210ENST00000448850 GGACTQ9BVM4 153 aa11.37□□□□□ -0.59
APP-210ENST00000448850 SLA2Q9H6Q3 261 aa11.37□□□□□ -0.59
APP-210ENST00000448850 FBXL7Q9UJT9 491 aa11.37□□□□□ -0.59
APP-210ENST00000448850 RPS10-NUDT3A0A1W2PQS6 291 aa11.36□□□□□ -0.59
APP-210ENST00000448850 K7EIM0 57 aa11.36□□□□□ -0.59
APP-210ENST00000448850 TAAR5O14804 337 aa11.36□□□□□ -0.59
APP-210ENST00000448850 NDUFB8O95169 186 aa11.36□□□□□ -0.59
APP-210ENST00000448850 TRGV3P03979 118 aa11.36□□□□□ -0.59
APP-210ENST00000448850 RHOGP84095 191 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms