RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 NXPH3O95157 252 aa10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 IFNA21P01568 189 aa10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 CLEC3BP05452 202 aa10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 HOXB5P09067 269 aa10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 MFAP2P55001 183 aa10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 SYNJ2BPP57105 145 aa10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 DEFA1P59665 94 aa10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 DEFA3P59666 94 aa10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 DHRS2Q13268 280 aa10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 PINX1Q96BK5 328 aaKnown RBP10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 CCDC140Q96MF4 163 aa10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 OR4C12Q96R67 309 aa10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 HIPK2Q9H2X6 1198 aa10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 HEYLQ9NQ87 328 aaPredicted RBP10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 C21orf62Q9NYP8 219 aa10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 PRKDCP78527 4128 aaKnown RBP10.77□□□□□ -0.69
GTF3C3-206ENST00000448539 IGHV3-21A0A0B4J1V1 117 aa10.76□□□□□ -0.69
GTF3C3-206ENST00000448539 CORTO00230 105 aa10.76□□□□□ -0.69
GTF3C3-206ENST00000448539 BMPR1BO00238 502 aa10.76□□□□□ -0.69
GTF3C3-206ENST00000448539 SAP30O75446 220 aa10.76□□□□□ -0.69
GTF3C3-206ENST00000448539 H2AFB2P0C5Z0 115 aa10.76□□□□□ -0.69
GTF3C3-206ENST00000448539 SLC25A6P12236 298 aa10.76□□□□□ -0.69
GTF3C3-206ENST00000448539 HTR2BP41595 481 aa10.76□□□□□ -0.69
GTF3C3-206ENST00000448539 INSL3P51460 131 aa10.76□□□□□ -0.69
GTF3C3-206ENST00000448539 KLF5Q13887 457 aaPredicted RBP10.76□□□□□ -0.69
GTF3C3-206ENST00000448539 KPRPQ5T749 579 aaPredicted RBP10.76□□□□□ -0.69
GTF3C3-206ENST00000448539 ZNF502Q8TBZ5 544 aa10.76□□□□□ -0.69
GTF3C3-206ENST00000448539 SCARB1Q8WTV0 552 aa10.76□□□□□ -0.69
GTF3C3-206ENST00000448539 TGP01266 2768 aa10.76□□□□□ -0.69
GTF3C3-206ENST00000448539 GPR183P32249 361 aa10.75□□□□□ -0.69
GTF3C3-206ENST00000448539 TNFRSF9Q07011 255 aa10.75□□□□□ -0.69
GTF3C3-206ENST00000448539 FAM106AQ4KMX7 169 aa10.75□□□□□ -0.69
GTF3C3-206ENST00000448539 Q56UQ5 140 aa10.75□□□□□ -0.69
GTF3C3-206ENST00000448539 GGNBP1Q5YKI7 109 aa10.75□□□□□ -0.69
GTF3C3-206ENST00000448539 ACSM6Q6P461 480 aa10.75□□□□□ -0.69
GTF3C3-206ENST00000448539 PLET1Q6UQ28 207 aa10.75□□□□□ -0.69
GTF3C3-206ENST00000448539 UBAC2Q8NBM4 344 aa10.75□□□□□ -0.69
GTF3C3-206ENST00000448539 GAR1Q9NY12 217 aaKnown RBP10.75□□□□□ -0.69
GTF3C3-206ENST00000448539 PEMTQ9UBM1 199 aa10.75□□□□□ -0.69
GTF3C3-206ENST00000448539 HSPB7Q9UBY9 170 aa10.75□□□□□ -0.69
GTF3C3-206ENST00000448539 NOTCH3Q9UM47 2321 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 OR2T8A6NH00 312 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 K7EIM0 57 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 MED6O75586 246 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 OR2C1O95371 312 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 MT-CO2P00403 227 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 RNASE2P10153 161 aaKnown RBP10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 MFAP4P55083 255 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 IFITM3Q01628 133 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 NOXA1Q86UR1 476 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 SLC24A4Q8NFF2 622 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 OR52B4Q8NGK2 314 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 OR9G4Q8NGQ1 327 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 DTD1Q8TEA8 209 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 MITD1Q8WV92 249 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 BSCL2Q96G97 398 aaPredicted RBP10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 ATP6V0BQ99437 205 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 RBKSQ9H477 322 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 ZC4H2Q9NQZ6 224 aa10.74□□□□□ -0.69
GTF3C3-206ENST00000448539 ZNF320A2RRD8 509 aa10.73□□□□□ -0.69
GTF3C3-206ENST00000448539 I3L2K1 104 aa10.73□□□□□ -0.69
GTF3C3-206ENST00000448539 TGOLN2O43493 480 aa10.73□□□□□ -0.69
GTF3C3-206ENST00000448539 ADAP1O75689 374 aa10.73□□□□□ -0.69
GTF3C3-206ENST00000448539 IFNA10P01566 189 aa10.73□□□□□ -0.69
GTF3C3-206ENST00000448539 OPRK1P41145 380 aa10.73□□□□□ -0.69
GTF3C3-206ENST00000448539 SPSB3Q6PJ21 355 aa10.73□□□□□ -0.69
GTF3C3-206ENST00000448539 REC114Q7Z4M0 266 aa10.73□□□□□ -0.69
GTF3C3-206ENST00000448539 UXS1Q8NBZ7 420 aa10.73□□□□□ -0.69
GTF3C3-206ENST00000448539 DUSP18Q8NEJ0 188 aa10.73□□□□□ -0.69
GTF3C3-206ENST00000448539 ZNF431Q8TF32 576 aaPredicted RBP10.73□□□□□ -0.69
GTF3C3-206ENST00000448539 TXN2Q99757 166 aa10.73□□□□□ -0.69
GTF3C3-206ENST00000448539 RPS10-NUDT3A0A1W2PQS6 291 aa10.72□□□□□ -0.69
GTF3C3-206ENST00000448539 FAM90A26D6RGX4 464 aa10.72□□□□□ -0.69
GTF3C3-206ENST00000448539 NUPL2O15504 423 aaKnown RBP10.72□□□□□ -0.69
GTF3C3-206ENST00000448539 PITX3O75364 302 aa10.72□□□□□ -0.69
GTF3C3-206ENST00000448539 NPY1RP25929 384 aa10.72□□□□□ -0.69
GTF3C3-206ENST00000448539 EGFEM1PQ0D2K5 195 aa10.72□□□□□ -0.69
GTF3C3-206ENST00000448539 C2orf83Q53S99 150 aa10.72□□□□□ -0.69
GTF3C3-206ENST00000448539 GPHB5Q86YW7 130 aa10.72□□□□□ -0.69
GTF3C3-206ENST00000448539 SEC22CQ9BRL7 303 aa10.72□□□□□ -0.69
GTF3C3-206ENST00000448539 U3KQ87 197 aa10.72□□□□□ -0.69
GTF3C3-206ENST00000448539 NOTCH1P46531 2555 aa10.72□□□□□ -0.69
GTF3C3-206ENST00000448539 LGALS9O00182 355 aa10.71□□□□□ -0.69
GTF3C3-206ENST00000448539 GNG7O60262 68 aa10.71□□□□□ -0.69
GTF3C3-206ENST00000448539 SCGB2A1O75556 95 aa10.71□□□□□ -0.69
GTF3C3-206ENST00000448539 IGHV3-48P01763 117 aa10.71□□□□□ -0.69
GTF3C3-206ENST00000448539 PRB2P02812 416 aaPredicted RBP10.71□□□□□ -0.69
GTF3C3-206ENST00000448539 NPBWR1P48145 328 aa10.71□□□□□ -0.69
GTF3C3-206ENST00000448539 RPP30P78346 268 aaKnown RBP10.71□□□□□ -0.69
GTF3C3-206ENST00000448539 BSXQ3C1V8 233 aa10.71□□□□□ -0.69
GTF3C3-206ENST00000448539 NRARPQ7Z6K4 114 aa10.71□□□□□ -0.69
GTF3C3-206ENST00000448539 RNASEH2CQ8TDP1 164 aaKnown RBP10.71□□□□□ -0.69
GTF3C3-206ENST00000448539 CIB3Q96Q77 187 aaPredicted RBP10.71□□□□□ -0.69
GTF3C3-206ENST00000448539 GPN1Q9HCN4 374 aaPredicted RBP10.71□□□□□ -0.69
GTF3C3-206ENST00000448539 PALMDQ9NP74 551 aa10.71□□□□□ -0.69
GTF3C3-206ENST00000448539 IGHV3-35A0A0C4DH35 117 aa10.7□□□□□ -0.7
GTF3C3-206ENST00000448539 WRBO00258 174 aa10.7□□□□□ -0.7
GTF3C3-206ENST00000448539 LY86O95711 162 aa10.7□□□□□ -0.7
GTF3C3-206ENST00000448539 IAPPP10997 89 aa10.7□□□□□ -0.7
GTF3C3-206ENST00000448539 FCGR2BP31994 310 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms