RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 PIGPP57054 158 aa13.46□□□□□ -0.25
COL9A1-205ENST00000447041 ZNF124Q15973 351 aa13.46□□□□□ -0.25
COL9A1-205ENST00000447041 RNASE10Q5GAN6 216 aaKnown RBP13.46□□□□□ -0.25
COL9A1-205ENST00000447041 MZT2AQ6P582 158 aa13.46□□□□□ -0.25
COL9A1-205ENST00000447041 OR52I2Q8NH67 350 aa13.46□□□□□ -0.25
COL9A1-205ENST00000447041 TXN2Q99757 166 aa13.46□□□□□ -0.25
COL9A1-205ENST00000447041 EXTL2Q9UBQ6 330 aa13.46□□□□□ -0.25
COL9A1-205ENST00000447041 IGKV3-7A0A075B6H7 116 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 IGHV3OR16-13A0A075B7E8 117 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 IGHV3-74A0A0B4J1X5 117 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 KIR2DL5BA0A0G2JN68 375 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 KIR2DL5BA0A0G2JPC4 375 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 GNG7O60262 68 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 GABARAPO95166 117 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 P0C879 139 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 SMIM18P0DKX4 95 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 TFPI2P48307 235 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 ERHP84090 104 aaKnown RBP13.45□□□□□ -0.26
COL9A1-205ENST00000447041 TNFRSF9Q07011 255 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 CTF1Q16619 201 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 KIR2DL5AQ8N109 375 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 OR4D10Q8NGI6 311 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 KIR2DL5BQ8NHK3 375 aa13.45□□□□□ -0.26
COL9A1-205ENST00000447041 ZNF486Q96H40 463 aaPredicted RBP13.45□□□□□ -0.26
COL9A1-205ENST00000447041 CXorf65A6NEN9 183 aa13.44□□□□□ -0.26
COL9A1-205ENST00000447041 UBE2CO00762 179 aa13.44□□□□□ -0.26
COL9A1-205ENST00000447041 AKR1C2P52895 323 aa13.44□□□□□ -0.26
COL9A1-205ENST00000447041 ARRDC1Q8N5I2 433 aa13.44□□□□□ -0.26
COL9A1-205ENST00000447041 STPG3Q8N7X2 389 aa13.44□□□□□ -0.26
COL9A1-205ENST00000447041 AP3S1Q92572 193 aa13.44□□□□□ -0.26
COL9A1-205ENST00000447041 RNF183Q96D59 192 aa13.44□□□□□ -0.26
COL9A1-205ENST00000447041 GALNT14Q96FL9 552 aa13.44□□□□□ -0.26
COL9A1-205ENST00000447041 MAP6D1Q9H9H5 199 aa13.44□□□□□ -0.26
COL9A1-205ENST00000447041 MTFP1Q9UDX5 166 aa13.44□□□□□ -0.26
COL9A1-205ENST00000447041 TRAV14DV4A0A0A6YYC5 116 aa13.43□□□□□ -0.26
COL9A1-205ENST00000447041 A0A0B4J293 547 aa13.43□□□□□ -0.26
COL9A1-205ENST00000447041 C3orf85A0A1B0GTC6 90 aa13.43□□□□□ -0.26
COL9A1-205ENST00000447041 ST8SIA3O43173 380 aa13.43□□□□□ -0.26
COL9A1-205ENST00000447041 ZNF182P17025 639 aaPredicted RBP13.43□□□□□ -0.26
COL9A1-205ENST00000447041 SLC35G3Q8N808 338 aa13.43□□□□□ -0.26
COL9A1-205ENST00000447041 LINC00476Q8WZB0 136 aa13.43□□□□□ -0.26
COL9A1-205ENST00000447041 ABHD1Q96SE0 405 aa13.43□□□□□ -0.26
COL9A1-205ENST00000447041 A0A0G2JRQ6 117 aa13.42□□□□□ -0.26
COL9A1-205ENST00000447041 SP6Q3SY56 376 aa13.42□□□□□ -0.26
COL9A1-205ENST00000447041 FAM90A2PQ658T7 463 aa13.42□□□□□ -0.26
COL9A1-205ENST00000447041 TOMM20LQ6UXN7 152 aa13.42□□□□□ -0.26
COL9A1-205ENST00000447041 GBGT1Q8N5D6 347 aa13.42□□□□□ -0.26
COL9A1-205ENST00000447041 ST8SIA2Q92186 375 aa13.42□□□□□ -0.26
COL9A1-205ENST00000447041 ZFAND3Q9H8U3 227 aa13.42□□□□□ -0.26
COL9A1-205ENST00000447041 IFNA17P01571 189 aa13.41□□□□□ -0.26
COL9A1-205ENST00000447041 APOHP02749 345 aaPredicted RBP13.41□□□□□ -0.26
COL9A1-205ENST00000447041 TBPP20226 339 aa13.41□□□□□ -0.26
COL9A1-205ENST00000447041 SNCAP37840 140 aa13.41□□□□□ -0.26
COL9A1-205ENST00000447041 TRIM16LQ309B1 348 aa13.41□□□□□ -0.26
COL9A1-205ENST00000447041 SCGB2B2Q4G0G5 96 aa13.41□□□□□ -0.26
COL9A1-205ENST00000447041 GPR107Q5VW38 600 aa13.41□□□□□ -0.26
COL9A1-205ENST00000447041 TCF24Q7RTU0 167 aa13.41□□□□□ -0.26
COL9A1-205ENST00000447041 DUSP18Q8NEJ0 188 aa13.41□□□□□ -0.26
COL9A1-205ENST00000447041 OR13C8Q8NGS7 320 aa13.41□□□□□ -0.26
COL9A1-205ENST00000447041 GINS3Q9BRX5 216 aa13.41□□□□□ -0.26
COL9A1-205ENST00000447041 COPZ2Q9P299 210 aa13.41□□□□□ -0.26
COL9A1-205ENST00000447041 PUS1Q9Y606 427 aaKnown RBP eCLIP13.41□□□□□ -0.26
COL9A1-205ENST00000447041 IGHV3-66A0A0C4DH42 116 aa13.4□□□□□ -0.26
COL9A1-205ENST00000447041 NUPR2A6NF83 97 aa13.4□□□□□ -0.26
COL9A1-205ENST00000447041 INS-IGF2F8WCM5 200 aa13.4□□□□□ -0.26
COL9A1-205ENST00000447041 CD74P04233 296 aa13.4□□□□□ -0.26
COL9A1-205ENST00000447041 RNASE2P10153 161 aaKnown RBP13.4□□□□□ -0.26
COL9A1-205ENST00000447041 ETV6P41212 452 aa13.4□□□□□ -0.26
COL9A1-205ENST00000447041 NPBWR1P48145 328 aa13.4□□□□□ -0.26
COL9A1-205ENST00000447041 HOXA1P49639 335 aaPredicted RBP13.4□□□□□ -0.26
COL9A1-205ENST00000447041 PVRIGQ6DKI7 326 aa13.4□□□□□ -0.26
COL9A1-205ENST00000447041 FAAP20Q6NZ36 180 aa13.4□□□□□ -0.26
COL9A1-205ENST00000447041 LILRB2Q8N423 598 aa13.4□□□□□ -0.26
COL9A1-205ENST00000447041 TMEM229BQ8NBD8 167 aa13.4□□□□□ -0.26
COL9A1-205ENST00000447041 MARCH1Q8TCQ1 289 aa13.4□□□□□ -0.26
COL9A1-205ENST00000447041 PDCD10Q9BUL8 212 aa13.4□□□□□ -0.26
COL9A1-205ENST00000447041 MIXL1Q9H2W2 232 aa13.4□□□□□ -0.26
COL9A1-205ENST00000447041 MRPL36Q9P0J6 103 aaKnown RBP13.4□□□□□ -0.26
COL9A1-205ENST00000447041 A0A1B0GU03 582 aa13.39□□□□□ -0.27
COL9A1-205ENST00000447041 RAB3DO95716 219 aa13.39□□□□□ -0.27
COL9A1-205ENST00000447041 UCP1P25874 307 aa13.39□□□□□ -0.27
COL9A1-205ENST00000447041 TAS2R19P59542 299 aa13.39□□□□□ -0.27
COL9A1-205ENST00000447041 ZNF600Q6ZNG1 722 aa13.39□□□□□ -0.27
COL9A1-205ENST00000447041 CCDC71LQ8N9Z2 235 aa13.39□□□□□ -0.27
COL9A1-205ENST00000447041 TERB2Q8NHR7 220 aa13.39□□□□□ -0.27
COL9A1-205ENST00000447041 ZFAND1Q8TCF1 268 aa13.39□□□□□ -0.27
COL9A1-205ENST00000447041 C6orf62Q9GZU0 229 aaPredicted RBP13.39□□□□□ -0.27
COL9A1-205ENST00000447041 FNDC4Q9H6D8 234 aaPredicted RBP13.39□□□□□ -0.27
COL9A1-205ENST00000447041 VSIRQ9H7M9 311 aa13.39□□□□□ -0.27
COL9A1-205ENST00000447041 ATG12O94817 140 aa13.38□□□□□ -0.27
COL9A1-205ENST00000447041 TMEM50AO95807 157 aa13.38□□□□□ -0.27
COL9A1-205ENST00000447041 LY6G6CO95867 125 aa13.38□□□□□ -0.27
COL9A1-205ENST00000447041 STEAP1BQ6NZ63 245 aa13.38□□□□□ -0.27
COL9A1-205ENST00000447041 CEMP1Q6PRD7 247 aaPredicted RBP13.38□□□□□ -0.27
COL9A1-205ENST00000447041 RNASE11Q8TAA1 199 aaKnown RBP13.38□□□□□ -0.27
COL9A1-205ENST00000447041 CSTL1Q9H114 145 aa13.38□□□□□ -0.27
COL9A1-205ENST00000447041 MPTX1A8MV57 137 aa13.37□□□□□ -0.27
COL9A1-205ENST00000447041 GABARAPH6UMI1 98 aa13.37□□□□□ -0.27
COL9A1-205ENST00000447041 CORTO00230 105 aa13.37□□□□□ -0.27
COL9A1-205ENST00000447041 RGS5O15539 181 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms