RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 RNASE2P10153 161 aaKnown RBP11.25□□□□□ -0.61
HDAC4-204ENST00000446876 VAMP1P23763 118 aa11.25□□□□□ -0.61
HDAC4-204ENST00000446876 BTCP35070 178 aa11.25□□□□□ -0.61
HDAC4-204ENST00000446876 PPP1R1AQ13522 171 aa11.25□□□□□ -0.61
HDAC4-204ENST00000446876 AARDQ4LEZ3 155 aa11.25□□□□□ -0.61
HDAC4-204ENST00000446876 Q56UQ5 140 aa11.25□□□□□ -0.61
HDAC4-204ENST00000446876 SLC25A21Q9BQT8 299 aaPredicted RBP11.25□□□□□ -0.61
HDAC4-204ENST00000446876 ENY2Q9NPA8 101 aa11.25□□□□□ -0.61
HDAC4-204ENST00000446876 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.25□□□□□ -0.61
HDAC4-204ENST00000446876 A0A0B4J2A0 478 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 TMEM213A2RRL7 107 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 INS-IGF2F8WCM5 200 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 LGALS9O00182 355 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 ANXA3P12429 323 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 FOLR2P14207 255 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 ADMP35318 185 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 SNCAP37840 140 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 SPCS3P61009 180 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 RBMS2Q15434 407 aaKnown RBP11.24□□□□□ -0.61
HDAC4-204ENST00000446876 ANKRD55Q3KP44 614 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 FAM106AQ4KMX7 169 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 TM4SF20Q53R12 229 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 TMEM128Q5BJH2 165 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 NMSQ5H8A3 153 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 LGI3Q8N145 548 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 CENPSQ8N2Z9 138 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 DYNLRB2Q8TF09 96 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 SIGLEC8Q9NYZ4 499 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 SHPKQ9UHJ6 478 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 FLVCR2Q9UPI3 526 aa11.24□□□□□ -0.61
HDAC4-204ENST00000446876 IGHV3OR16-8A0A075B7F1 116 aa11.23□□□□□ -0.61
HDAC4-204ENST00000446876 NAP1L6A6NFF2 107 aa11.23□□□□□ -0.61
HDAC4-204ENST00000446876 CEBPZOSA8MTT3 80 aa11.23□□□□□ -0.61
HDAC4-204ENST00000446876 A8MWP6 167 aa11.23□□□□□ -0.61
HDAC4-204ENST00000446876 NDUFB6O95139 128 aa11.23□□□□□ -0.61
HDAC4-204ENST00000446876 SULT1A3P0DMM9 295 aa11.23□□□□□ -0.61
HDAC4-204ENST00000446876 SULT1A4P0DMN0 295 aa11.23□□□□□ -0.61
HDAC4-204ENST00000446876 CD300EQ496F6 205 aaPredicted RBP11.23□□□□□ -0.61
HDAC4-204ENST00000446876 OR52E5Q8NH55 327 aa11.23□□□□□ -0.61
HDAC4-204ENST00000446876 BSCL2Q96G97 398 aaPredicted RBP11.23□□□□□ -0.61
HDAC4-204ENST00000446876 ZNF414Q96IQ9 312 aa11.23□□□□□ -0.61
HDAC4-204ENST00000446876 ZNF436Q9C0F3 470 aaPredicted RBP11.23□□□□□ -0.61
HDAC4-204ENST00000446876 SFT2D2O95562 160 aa11.22□□□□□ -0.61
HDAC4-204ENST00000446876 CBLN1P23435 193 aa11.22□□□□□ -0.61
HDAC4-204ENST00000446876 MFAP4P55083 255 aa11.22□□□□□ -0.61
HDAC4-204ENST00000446876 SRPXP78539 464 aa11.22□□□□□ -0.61
HDAC4-204ENST00000446876 CD69Q07108 199 aa11.22□□□□□ -0.61
HDAC4-204ENST00000446876 B9D2Q9BPU9 175 aa11.22□□□□□ -0.61
HDAC4-204ENST00000446876 SMAD5-AS1Q9Y6J3 95 aa11.22□□□□□ -0.61
HDAC4-204ENST00000446876 PLA2G10O15496 165 aa11.21□□□□□ -0.61
HDAC4-204ENST00000446876 ZNF207O43670 478 aaKnown RBP11.21□□□□□ -0.61
HDAC4-204ENST00000446876 CTSGP08311 255 aa11.21□□□□□ -0.61
HDAC4-204ENST00000446876 DCTN2Q13561 401 aaKnown RBP11.21□□□□□ -0.61
HDAC4-204ENST00000446876 SMCO1Q147U7 214 aa11.21□□□□□ -0.61
HDAC4-204ENST00000446876 MLANAQ16655 118 aa11.21□□□□□ -0.61
HDAC4-204ENST00000446876 DEFB114Q30KQ6 69 aa11.21□□□□□ -0.61
HDAC4-204ENST00000446876 BSXQ3C1V8 233 aa11.21□□□□□ -0.61
HDAC4-204ENST00000446876 PVRIGQ6DKI7 326 aa11.21□□□□□ -0.61
HDAC4-204ENST00000446876 LCN12Q6JVE5 192 aa11.21□□□□□ -0.61
HDAC4-204ENST00000446876 SPSB3Q6PJ21 355 aa11.21□□□□□ -0.61
HDAC4-204ENST00000446876 UXS1Q8NBZ7 420 aa11.21□□□□□ -0.61
HDAC4-204ENST00000446876 TMEM190Q8WZ59 177 aa11.21□□□□□ -0.61
HDAC4-204ENST00000446876 ASCL2Q99929 193 aa11.21□□□□□ -0.61
HDAC4-204ENST00000446876 C20orf24Q9BUV8 137 aa11.21□□□□□ -0.61
HDAC4-204ENST00000446876 HEYLQ9NQ87 328 aaPredicted RBP11.21□□□□□ -0.61
HDAC4-204ENST00000446876 MRPL36Q9P0J6 103 aaKnown RBP11.21□□□□□ -0.61
HDAC4-204ENST00000446876 MLXQ9UH92 298 aa11.21□□□□□ -0.61
HDAC4-204ENST00000446876 CENPXA8MT69 81 aa11.2□□□□□ -0.62
HDAC4-204ENST00000446876 ANXA7P20073 488 aaKnown RBP11.2□□□□□ -0.62
HDAC4-204ENST00000446876 SUB1P53999 127 aaKnown RBP eCLIP11.2□□□□□ -0.62
HDAC4-204ENST00000446876 TNFRSF9Q07011 255 aa11.2□□□□□ -0.62
HDAC4-204ENST00000446876 BTNL8Q6UX41 500 aa11.2□□□□□ -0.62
HDAC4-204ENST00000446876 Q8N1Y9 231 aa11.2□□□□□ -0.62
HDAC4-204ENST00000446876 OR1S1Q8NH92 325 aa11.2□□□□□ -0.62
HDAC4-204ENST00000446876 TMEM170AQ8WVE7 144 aa11.2□□□□□ -0.62
HDAC4-204ENST00000446876 WDR89Q96FK6 387 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-204ENST00000446876 ATP6V0BQ99437 205 aa11.2□□□□□ -0.62
HDAC4-204ENST00000446876 C7orf50Q9BRJ6 194 aaKnown RBP11.2□□□□□ -0.62
HDAC4-204ENST00000446876 RBKSQ9H477 322 aa11.2□□□□□ -0.62
HDAC4-204ENST00000446876 FNDC4Q9H6D8 234 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-204ENST00000446876 C9orf170A2RU37 121 aa11.19□□□□□ -0.62
HDAC4-204ENST00000446876 NDUFA4O00483 81 aa11.19□□□□□ -0.62
HDAC4-204ENST00000446876 NUPL2O15504 423 aaKnown RBP11.19□□□□□ -0.62
HDAC4-204ENST00000446876 LYRM1O43325 122 aa11.19□□□□□ -0.62
HDAC4-204ENST00000446876 GNG7O60262 68 aa11.19□□□□□ -0.62
HDAC4-204ENST00000446876 HOXB5P09067 269 aa11.19□□□□□ -0.62
HDAC4-204ENST00000446876 FCGR2BP31994 310 aaPredicted RBP11.19□□□□□ -0.62
HDAC4-204ENST00000446876 OPRK1P41145 380 aa11.19□□□□□ -0.62
HDAC4-204ENST00000446876 LRTM2Q8N967 370 aa11.19□□□□□ -0.62
HDAC4-204ENST00000446876 SLC24A4Q8NFF2 622 aa11.19□□□□□ -0.62
HDAC4-204ENST00000446876 OR2K2Q8NGT1 345 aa11.19□□□□□ -0.62
HDAC4-204ENST00000446876 PALMDQ9NP74 551 aa11.19□□□□□ -0.62
HDAC4-204ENST00000446876 HSPB7Q9UBY9 170 aa11.19□□□□□ -0.62
HDAC4-204ENST00000446876 UFC1Q9Y3C8 167 aa11.19□□□□□ -0.62
HDAC4-204ENST00000446876 A0A1B0GU03 582 aa11.18□□□□□ -0.62
HDAC4-204ENST00000446876 DUXBA0A1W2PPF3 345 aa11.18□□□□□ -0.62
HDAC4-204ENST00000446876 ZNF785A8K8V0 405 aa11.18□□□□□ -0.62
HDAC4-204ENST00000446876 CORTO00230 105 aa11.18□□□□□ -0.62
HDAC4-204ENST00000446876 HTR2BP41595 481 aa11.18□□□□□ -0.62
HDAC4-204ENST00000446876 GUCA2BQ16661 112 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms