RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 DISC1C4P0D8 188 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 G3V318 75 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 J3QRK9 145 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 RRHO14718 337 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 CTDSPLO15194 276 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 IGLV1-51P01701 117 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 HLA-DRB1P01911 266 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 PMP2P02689 132 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 CT45A6P0DMU7 189 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 CT45A5P0DMU8 189 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 CT45A7P0DMV0 189 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 PTHLHP12272 177 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 AADACP22760 399 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 G0S2P27469 103 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 HLA-DMAP28067 261 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 RAB9AP51151 201 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 UBE2G2P60604 165 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 RAP2BP61225 183 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 RUNX1Q01196 453 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 TMEM267Q0VDI3 215 aaPredicted RBP5.31□□□□□ -1.56
HDAC9-216ENST00000446646 SMCO1Q147U7 214 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 C5orf64Q2M2E5 130 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 RNASE12Q5GAN4 147 aaKnown RBP5.31□□□□□ -1.56
HDAC9-216ENST00000446646 AADACL3Q5VUY0 350 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 GLDNQ6ZMI3 551 aaPredicted RBP5.31□□□□□ -1.56
HDAC9-216ENST00000446646 IDO2Q6ZQW0 420 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 SLC38A6Q8IZM9 456 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 LINC00518Q8N0U6 118 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 Q8N6K4 173 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 TCTEX1D1Q8N7M0 179 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 ZNF491Q8N8L2 437 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 Q8N9W7 124 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 NPBQ8NG41 125 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 OSR1Q8TAX0 266 aaPredicted RBP5.31□□□□□ -1.56
HDAC9-216ENST00000446646 SMIM4Q8WVI0 70 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 DEDD2Q8WXF8 326 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 MOB3AQ96BX8 217 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 CYYR1Q96J86 154 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 PARP12Q9H0J9 701 aaKnown RBP5.31□□□□□ -1.56
HDAC9-216ENST00000446646 RBM38Q9H0Z9 239 aaKnown RBP5.31□□□□□ -1.56
HDAC9-216ENST00000446646 GEMIN7Q9H840 131 aaKnown RBP5.31□□□□□ -1.56
HDAC9-216ENST00000446646 TUBA4BQ9H853 241 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 MTFP1Q9UDX5 166 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 TBC1D24Q9ULP9 559 aa5.31□□□□□ -1.56
HDAC9-216ENST00000446646 PIGBOS1A0A0B4J2F0 54 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 NUPR2A6NF83 97 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 B5MCH6 92 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 GPR31O00270 319 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 RTL8CO15255 209 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 FCGR3BO75015 233 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 NDUFA3O95167 84 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 HRASP01112 189 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 IGF1P05019 195 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 AKAIN1P0CW23 69 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 PGAM2P15259 253 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 DUTP33316 252 aaKnown RBP5.3□□□□□ -1.56
HDAC9-216ENST00000446646 RFX2P48378 723 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 CAMPP49913 170 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 ERVK-16P61578 105 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 PYDC2Q56P42 97 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 ZNF660Q6AZW8 331 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-216ENST00000446646 TMEM65Q6PI78 240 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 C5orf24Q7Z6I8 188 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 MAPKAPK5-AS1Q8N8E1 139 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 CCDC71LQ8N9Z2 235 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 ZNF383Q8NA42 475 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 TMEM229BQ8NBD8 167 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 OR52I2Q8NH67 350 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 ZFAND1Q8TCF1 268 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 ZNF486Q96H40 463 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-216ENST00000446646 SCGB3A2Q96PL1 93 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 PRRT1Q99946 306 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 C7orf50Q9BRJ6 194 aaKnown RBP5.3□□□□□ -1.56
HDAC9-216ENST00000446646 NXF2Q9GZY0 626 aaKnown RBP5.3□□□□□ -1.56
HDAC9-216ENST00000446646 PARP11Q9NR21 331 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 PLSCR3Q9NRY6 295 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 SIGLEC8Q9NYZ4 499 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 METTL1Q9UBP6 276 aaKnown RBP5.3□□□□□ -1.56
HDAC9-216ENST00000446646 SCP2D1Q9UJQ7 156 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 ZNF580Q9UK33 172 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 C14orf166Q9Y224 244 aaKnown RBP5.3□□□□□ -1.56
HDAC9-216ENST00000446646 WSB1Q9Y6I7 421 aa5.3□□□□□ -1.56
HDAC9-216ENST00000446646 IGKV1D-13A0A0B4J2D9 117 aa5.29□□□□□ -1.56
HDAC9-216ENST00000446646 A0A0J9YWU9 116 aa5.29□□□□□ -1.56
HDAC9-216ENST00000446646 C5orf52A6NGY3 159 aa5.29□□□□□ -1.56
HDAC9-216ENST00000446646 RBFOX2O43251 390 aaKnown RBP eCLIP5.29□□□□□ -1.56
HDAC9-216ENST00000446646 GSTZ1O43708 216 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-216ENST00000446646 PAGE4O60829 102 aa5.29□□□□□ -1.56
HDAC9-216ENST00000446646 ATG12O94817 140 aa5.29□□□□□ -1.56
HDAC9-216ENST00000446646 CNIH1O95406 144 aa5.29□□□□□ -1.56
HDAC9-216ENST00000446646 IGKV1-16P04430 117 aa5.29□□□□□ -1.56
HDAC9-216ENST00000446646 IGKV1-13P0DP09 117 aa5.29□□□□□ -1.56
HDAC9-216ENST00000446646 TNFSF8P32971 234 aa5.29□□□□□ -1.56
HDAC9-216ENST00000446646 F2RL1P55085 397 aa5.29□□□□□ -1.56
HDAC9-216ENST00000446646 ELLP55199 621 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-216ENST00000446646 UCP3P55916 312 aa5.29□□□□□ -1.56
HDAC9-216ENST00000446646 UBE2KP61086 200 aa5.29□□□□□ -1.56
HDAC9-216ENST00000446646 SURF2Q15527 256 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-216ENST00000446646 SCGB2B2Q4G0G5 96 aa5.29□□□□□ -1.56
HDAC9-216ENST00000446646 TRIQKQ629K1 86 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms