RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	ZC2HC1A	Q96GY0	325 aa		10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	TMEM140	Q9NV12	185 aa		10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	TP53TG3	Q9ULZ0	132 aa		10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	SPINT2	O43291	252 aa		10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	WDR82	Q6UXN9	313 aa		10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	C19orf35	Q6ZS72	473 aa		10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	KIR3DL3	Q8N743	410 aa		10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	STPG3	Q8N7X2	389 aa		10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	ANAPC16	Q96DE5	110 aa		10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	CLCF1	Q9UBD9	225 aa		10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	CRYBA4	P53673	196 aa		10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	RBPJ	Q06330	500 aa		10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	CISD2	Q8N5K1	135 aa	Known RBP	10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	NANOS1	Q8WY41	292 aa	Known RBP	10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	GGTLC1	Q9BX51	225 aa		10.35	□□□□□ -0.75
DDR1-238	ENST00000446312	OOEP	A6NGQ2	149 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	REG1A	P05451	166 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	PRDX2	P32119	198 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	TCTEX1D1	Q8N7M0	179 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	TMEM45B	Q96B21	275 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	S1PR3	Q99500	378 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	WASHC3	Q9Y3C0	194 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	MALRD1	Q5VYJ5	2156 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	IGKV3D-15	A0A087WSY6	115 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	CA2	P00918	260 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	IGLC2	P0DOY2	106 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	IGLC3	P0DOY3	106 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	RAB9A	P51151	201 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	RPL15	P61313	204 aa	Known RBP	10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	CENPW	Q5EE01	88 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	ACP7	Q6ZNF0	438 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	C11orf53	Q8IXP5	236 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	MMD2	Q8IY49	270 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	PKIB	Q9C010	78 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	FBXL7	Q9UJT9	491 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	TCF19	Q9Y242	345 aa		10.34	□□□□□ -0.75
DDR1-238	ENST00000446312	SH2D7	A6NKC9	451 aa	Predicted RBP	10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	VSTM5	A8MXK1	200 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	ZNF253	O75346	499 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	CD99	P14209	185 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	SRI	P30626	198 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	ARF6	P62330	175 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	ZNF766	Q5HY98	468 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	TMEM164	Q5U3C3	297 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	OR9G1	Q8NH87	305 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	FAM168A	Q92567	244 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	SARAF	Q96BY9	339 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	GNB4	Q9HAV0	340 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	ENY2	Q9NPA8	101 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	KMT2E	Q8IZD2	1858 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	GCHFR	P30047	84 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	TSPO	P30536	169 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	APOBEC3A	P31941	199 aa	Predicted RBP	10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	PAX2	Q02962	417 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	RNPS1	Q15287	305 aa	Known RBP	10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	C10orf55	Q5SWW7	151 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	BLNK	Q8WV28	456 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	IGFBPL1	Q8WX77	278 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	PYGO2	Q9BRQ0	406 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	AGMAT	Q9BSE5	352 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	IGHV3-72	A0A0B4J1Y9	119 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312		M0R1B8	84 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	CECR9	P0C854	216 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	LINC00310	P59036	64 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	SELENOV	P59797	346 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	ERVK11-1	P61568	191 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	PAFAH1B2	P68402	229 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	MSMP	Q1L6U9	139 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	MORN5	Q5VZ52	161 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	MBNL3	Q9NUK0	354 aa	Known RBP	10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	WDR83OS	Q9Y284	106 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	DSCAM	O60469	2012 aa		10.33	□□□□□ -0.76
DDR1-238	ENST00000446312	ARHGAP32	A7KAX9	2087 aa		10.32	□□□□□ -0.76
DDR1-238	ENST00000446312	DUT	P33316	252 aa	Known RBP	10.32	□□□□□ -0.76
DDR1-238	ENST00000446312	EFNB3	Q15768	340 aa		10.32	□□□□□ -0.76
DDR1-238	ENST00000446312	MOB1B	Q7L9L4	216 aa		10.32	□□□□□ -0.76
DDR1-238	ENST00000446312	RPRML	Q8N4K4	120 aa		10.32	□□□□□ -0.76
DDR1-238	ENST00000446312	LINC00470	Q9BZP3	86 aa		10.32	□□□□□ -0.76
DDR1-238	ENST00000446312	TECR	Q9NZ01	308 aa	Known RBP	10.32	□□□□□ -0.76
DDR1-238	ENST00000446312	TBL2	Q9Y4P3	447 aa	Known RBP	10.32	□□□□□ -0.76
DDR1-238	ENST00000446312	KLRC4-KLRK1	H3BQV0	150 aa		10.32	□□□□□ -0.76
DDR1-238	ENST00000446312	PYY	P10082	97 aa		10.32	□□□□□ -0.76
DDR1-238	ENST00000446312	TRAT1	Q6PIZ9	186 aa		10.32	□□□□□ -0.76
DDR1-238	ENST00000446312	PRSS57	Q6UWY2	283 aa		10.32	□□□□□ -0.76
DDR1-238	ENST00000446312		Q8N7P7	452 aa		10.32	□□□□□ -0.76
DDR1-238	ENST00000446312	SRP14	P37108	136 aa	Known RBP	10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	FOXA3	P55318	350 aa	Predicted RBP	10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	ZNF146	Q15072	292 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	C1orf174	Q8IYL3	243 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	OR2T6	Q8NHC8	308 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	AP1S3	Q96PC3	154 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	TAAR6	Q96RI8	345 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	PMCHL2	Q9BQD1	86 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	IGKV1-16	P04430	117 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	GNG4	P50150	75 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	ZNF137P	P52743	207 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	CKS1B	P61024	79 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	GNG5	P63218	68 aa		10.31	□□□□□ -0.76
DDR1-238	ENST00000446312	SSBP2	P81877	361 aa	Predicted RBP	10.31	□□□□□ -0.76
DDR1-238	ENST00000446312		Q56UQ5	140 aa		10.31	□□□□□ -0.76

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