RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SCXQ7RTU7 201 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 LYZL2Q7Z4W2 148 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 OOSP2Q86WS3 158 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 RPRMLQ8N4K4 120 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 ANKRD29Q8N6D5 301 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 BPIFB6Q8NFQ5 453 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 OR8B12Q8NGG6 310 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 OR52L1Q8NGH7 329 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 SGMS2Q8NHU3 365 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 CD200R1Q8TD46 325 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 RAD51AP1Q96B01 352 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 SPIN2AQ99865 258 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 SPIN2BQ9BPZ2 258 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 RNASE7Q9H1E1 156 aaKnown RBP2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 AK3Q9UIJ7 227 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 ANKRD17O75179 2603 aaKnown RBP2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 DSCAML1Q8TD84 2053 aa2.62□□□□□ -1.99
HMGB1P48-201ENST00000446155 MYO9BQ13459 2157 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 ATAD5Q96QE3 1844 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 COL4A4P53420 1690 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 H3BQ85 93 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 LST1O00453 97 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 ZNF324O75467 553 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 PFN1P07737 140 aaKnown RBP2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 RPSAP08865 295 aaKnown RBP2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 INAFM2P0DMQ5 153 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 IGHV3-30-3P0DP02 117 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 KCNE1P15382 129 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 ZNF140P52738 457 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 CRYBA4P53673 196 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 GNA12Q03113 381 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 IL15RAQ13261 267 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 EBI3Q14213 229 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 ARHGAP11BQ3KRB8 267 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 Q6ZQT7 251 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 SMIM15Q7Z3B0 74 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 GPHB5Q86YW7 130 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 OR4K13Q8NH42 304 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 PRTFDC1Q9NRG1 225 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 UQCC1Q9NVA1 299 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 RSL24D1Q9UHA3 163 aaKnown RBP2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 TEX15Q9BXT5 2789 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 TEP1Q99973 2627 aaKnown RBP2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 PIEZO2Q9H5I5 2752 aa2.61□□□□□ -1.99
HMGB1P48-201ENST00000446155 CNOT1A5YKK6 2376 aaKnown RBP2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 IGKV2D-24A0A075B6R9 120 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 A8MUN3 132 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 VGLL3A8MV65 326 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 C9JCJ5 164 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 IFNA1P01562 189 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 IGHV3-53P01767 116 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 IGKV3-11P04433 115 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 CRABP1P29762 137 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 TSPEAR-AS2P59090 65 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 RPS20P60866 119 aaKnown RBP2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 TNFAIP8L3Q5GJ75 292 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 KPRPQ5T749 579 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 AMTNQ6UX39 209 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 H1FOOQ8IZA3 346 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 LMX1AQ8TE12 382 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 CT55Q8WUE5 264 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 ROPN1LQ96C74 230 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 TSPAN32Q96QS1 320 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 TMEM147Q9BVK8 224 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 PCBD2Q9H0N5 130 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 BOLA2Q9H3K6 86 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 HECTD1Q9ULT8 2610 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 NOTCH2Q04721 2471 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 IBTKQ9P2D0 1353 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 THADAQ6YHU6 1953 aa2.6□□□□□ -1.99
HMGB1P48-201ENST00000446155 ABCA12Q86UK0 2595 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 SMG1Q96Q15 3661 aaKnown RBP2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 IGLV4-60A0A075B6I1 120 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 IGKV1D-37A0A075B6S9 117 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 TRAV40A0A0B4J280 105 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 EXOC1LA0A1B0GW35 172 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 COLCA2A8K830 154 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 CRYZL1O95825 349 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 NPPCP23582 126 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 CRYBB3P26998 211 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 KLF3P57682 345 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 TAS2R41P59536 307 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 DEFA1P59665 94 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 TBPL1P62380 186 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 RBX1P62877 108 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 GRK1Q15835 563 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 C9orf64Q5T6V5 341 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 GLT8D1Q68CQ7 371 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 TAC4Q86UU9 113 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 DAND5Q8N907 189 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 TEX47Q8TBZ9 253 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 RNASE6Q93091 150 aaKnown RBP2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 KLF6Q99612 283 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 COMMD5Q9GZQ3 224 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 C11orf1Q9H5F2 150 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 UTP11Q9Y3A2 253 aaKnown RBP2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 ALPK3Q96L96 1907 aa2.59□□□□□ -1.99
HMGB1P48-201ENST00000446155 SPTA1P02549 2419 aa2.59□□□□□ -2
HMGB1P48-201ENST00000446155 TENM4Q6N022 2769 aa2.59□□□□□ -2
HMGB1P48-201ENST00000446155 PRRC2BQ5JSZ5 2229 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms