RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 ERVK-16P61578 105 aa10.32□□□□□ -0.76
HMGN1-208ENST00000443046 ZNF767PQ75MW2 155 aa10.32□□□□□ -0.76
HMGN1-208ENST00000443046 ZNF114Q8NC26 417 aa10.32□□□□□ -0.76
HMGN1-208ENST00000443046 GRAMD2BQ96HH9 432 aa10.32□□□□□ -0.76
HMGN1-208ENST00000443046 NOTOA8MTQ0 251 aa10.31□□□□□ -0.76
HMGN1-208ENST00000443046 MT-CO2P00403 227 aa10.31□□□□□ -0.76
HMGN1-208ENST00000443046 KRASP01116 189 aa10.31□□□□□ -0.76
HMGN1-208ENST00000443046 EIF4EP06730 217 aaKnown RBP10.31□□□□□ -0.76
HMGN1-208ENST00000443046 FXYD4P59646 89 aa10.31□□□□□ -0.76
HMGN1-208ENST00000443046 UBE2UQ5VVX9 321 aa10.31□□□□□ -0.76
HMGN1-208ENST00000443046 C22orf42Q6IC83 251 aa10.31□□□□□ -0.76
HMGN1-208ENST00000443046 Q6ZRM9 215 aa10.31□□□□□ -0.76
HMGN1-208ENST00000443046 FCAMRQ8WWV6 532 aa10.31□□□□□ -0.76
HMGN1-208ENST00000443046 CLEC5AQ9NY25 188 aa10.31□□□□□ -0.76
HMGN1-208ENST00000443046 FKBP11Q9NYL4 201 aa10.31□□□□□ -0.76
HMGN1-208ENST00000443046 PRNDQ9UKY0 176 aa10.31□□□□□ -0.76
HMGN1-208ENST00000443046 NACAE9PAV3 2078 aa10.3□□□□□ -0.76
HMGN1-208ENST00000443046 IGHV3-66A0A0C4DH42 116 aa10.3□□□□□ -0.76
HMGN1-208ENST00000443046 SMIM30A4D0T7 59 aa10.3□□□□□ -0.76
HMGN1-208ENST00000443046 KNCNA6PVL3 124 aa10.3□□□□□ -0.76
HMGN1-208ENST00000443046 GNG7O60262 68 aa10.3□□□□□ -0.76
HMGN1-208ENST00000443046 PGLYRP1O75594 196 aaPredicted RBP10.3□□□□□ -0.76
HMGN1-208ENST00000443046 SNAPC5O75971 98 aa10.3□□□□□ -0.76
HMGN1-208ENST00000443046 IGHV3-48P01763 117 aa10.3□□□□□ -0.76
HMGN1-208ENST00000443046 G6PCP35575 357 aa10.3□□□□□ -0.76
HMGN1-208ENST00000443046 LPAR6P43657 344 aa10.3□□□□□ -0.76
HMGN1-208ENST00000443046 TBCEQ15813 527 aaPredicted RBP10.3□□□□□ -0.76
HMGN1-208ENST00000443046 OR5AP2Q8NGF4 316 aa10.3□□□□□ -0.76
HMGN1-208ENST00000443046 DCANP1Q8TF63 244 aa10.3□□□□□ -0.76
HMGN1-208ENST00000443046 MISP3Q96FF7 219 aa10.3□□□□□ -0.76
HMGN1-208ENST00000443046 RABAC1Q9UI14 185 aa10.3□□□□□ -0.76
HMGN1-208ENST00000443046 IGLV2-18A0A075B6J9 118 aa10.29□□□□□ -0.76
HMGN1-208ENST00000443046 A0A1B0GU03 582 aa10.29□□□□□ -0.76
HMGN1-208ENST00000443046 IFNA10P01566 189 aa10.29□□□□□ -0.76
HMGN1-208ENST00000443046 RPL11P62913 178 aaKnown RBP10.29□□□□□ -0.76
HMGN1-208ENST00000443046 DHRS11Q6UWP2 260 aa10.29□□□□□ -0.76
HMGN1-208ENST00000443046 ZNF600Q6ZNG1 722 aa10.29□□□□□ -0.76
HMGN1-208ENST00000443046 ZNF367Q7RTV3 350 aa10.29□□□□□ -0.76
HMGN1-208ENST00000443046 TMEM17Q86X19 198 aa10.29□□□□□ -0.76
HMGN1-208ENST00000443046 BORCS5Q969J3 196 aa10.29□□□□□ -0.76
HMGN1-208ENST00000443046 RHBDL2Q9NX52 303 aa10.29□□□□□ -0.76
HMGN1-208ENST00000443046 PUS1Q9Y606 427 aaKnown RBP eCLIP10.29□□□□□ -0.76
HMGN1-208ENST00000443046 RLN1P04808 185 aa10.28□□□□□ -0.76
HMGN1-208ENST00000443046 NPY1RP25929 384 aa10.28□□□□□ -0.76
HMGN1-208ENST00000443046 RNF212Q495C1 297 aa10.28□□□□□ -0.76
HMGN1-208ENST00000443046 SOHLH1Q5JUK2 328 aa10.28□□□□□ -0.76
HMGN1-208ENST00000443046 MAPKAPK5-AS1Q8N8E1 139 aa10.28□□□□□ -0.76
HMGN1-208ENST00000443046 LGALS14Q8TCE9 139 aa10.28□□□□□ -0.76
HMGN1-208ENST00000443046 FAM210BQ96KR6 192 aa10.28□□□□□ -0.76
HMGN1-208ENST00000443046 TSC22D3Q99576 134 aa10.28□□□□□ -0.76
HMGN1-208ENST00000443046 TMEM231Q9H6L2 316 aa10.28□□□□□ -0.76
HMGN1-208ENST00000443046 TRAV18A0A075B6X5 111 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 TMEM50AO95807 157 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 IFNA21P01568 189 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 IFNA17P01571 189 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 ZNF688P0C7X2 276 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 CRYBB3P26998 211 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 FGF9P31371 208 aaPredicted RBP10.27□□□□□ -0.77
HMGN1-208ENST00000443046 NPBWR1P48145 328 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 PRCDQ00LT1 54 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 ACTL10Q5JWF8 245 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 C1orf134Q5TEV5 83 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 TPRA1Q86W33 373 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 MOB3AQ96BX8 217 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 SLC25A38Q96DW6 304 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 RAB40CQ96S21 281 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 VCXQ9H320 206 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 DAPK2Q9UIK4 370 aa10.27□□□□□ -0.77
HMGN1-208ENST00000443046 A0A1W2PS18 150 aa10.26□□□□□ -0.77
HMGN1-208ENST00000443046 NPPCP23582 126 aa10.26□□□□□ -0.77
HMGN1-208ENST00000443046 SFXN4Q6P4A7 337 aa10.26□□□□□ -0.77
HMGN1-208ENST00000443046 STXBP6Q8NFX7 210 aa10.26□□□□□ -0.77
HMGN1-208ENST00000443046 SEC22AQ96IW7 307 aa10.26□□□□□ -0.77
HMGN1-208ENST00000443046 NEU1Q99519 415 aa10.26□□□□□ -0.77
HMGN1-208ENST00000443046 AUNIPQ9H7T9 357 aa10.26□□□□□ -0.77
HMGN1-208ENST00000443046 FAM212BQ9NTI7 297 aaPredicted RBP10.26□□□□□ -0.77
HMGN1-208ENST00000443046 TXNL4BQ9NX01 149 aaKnown RBP10.26□□□□□ -0.77
HMGN1-208ENST00000443046 A0A0A6YYH2 397 aa10.25□□□□□ -0.77
HMGN1-208ENST00000443046 A6NJ64 397 aa10.25□□□□□ -0.77
HMGN1-208ENST00000443046 P2RY1P47900 373 aa10.25□□□□□ -0.77
HMGN1-208ENST00000443046 SCAND1P57086 179 aa10.25□□□□□ -0.77
HMGN1-208ENST00000443046 HERV-K104P61576 105 aa10.25□□□□□ -0.77
HMGN1-208ENST00000443046 ZNF705AQ6ZN79 300 aaPredicted RBP10.25□□□□□ -0.77
HMGN1-208ENST00000443046 Q8N1X5 172 aa10.25□□□□□ -0.77
HMGN1-208ENST00000443046 OR5H6Q8NGV6 325 aa10.25□□□□□ -0.77
HMGN1-208ENST00000443046 PINX1Q96BK5 328 aaKnown RBP10.25□□□□□ -0.77
HMGN1-208ENST00000443046 C16orf90A8MZG2 172 aa10.24□□□□□ -0.77
HMGN1-208ENST00000443046 FCER2P06734 321 aa10.24□□□□□ -0.77
HMGN1-208ENST00000443046 SPART-AS1P0CW21 52 aa10.24□□□□□ -0.77
HMGN1-208ENST00000443046 CBX5P45973 191 aa10.24□□□□□ -0.77
HMGN1-208ENST00000443046 AQP4P55087 323 aa10.24□□□□□ -0.77
HMGN1-208ENST00000443046 HSPE1P61604 102 aaKnown RBP10.24□□□□□ -0.77
HMGN1-208ENST00000443046 KCTD21Q4G0X4 260 aa10.24□□□□□ -0.77
HMGN1-208ENST00000443046 UBE2DNLQ8IWF7 75 aa10.24□□□□□ -0.77
HMGN1-208ENST00000443046 ZNF2Q9BSG1 426 aaPredicted RBP10.24□□□□□ -0.77
HMGN1-208ENST00000443046 C1QTNF4Q9BXJ3 329 aa10.24□□□□□ -0.77
HMGN1-208ENST00000443046 RRP15Q9Y3B9 282 aaKnown RBP10.24□□□□□ -0.77
HMGN1-208ENST00000443046 U3KQE9 123 aa10.24□□□□□ -0.77
HMGN1-208ENST00000443046 ZNF705FA8MVS1 300 aaPredicted RBP10.23□□□□□ -0.77
HMGN1-208ENST00000443046 INS-IGF2F8WCM5 200 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms