RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 SLC16A13Q7RTY0 426 aa11.63□□□□□ -0.55
LINC00299-202ENST00000442956 TMEM144Q7Z5S9 345 aa11.63□□□□□ -0.55
LINC00299-202ENST00000442956 LRRC75A-AS1Q8N1F1 130 aa11.63□□□□□ -0.55
LINC00299-202ENST00000442956 ZNF114Q8NC26 417 aa11.63□□□□□ -0.55
LINC00299-202ENST00000442956 MBD3L1Q8WWY6 194 aa11.63□□□□□ -0.55
LINC00299-202ENST00000442956 EIF5A2Q9GZV4 153 aaKnown RBP11.63□□□□□ -0.55
LINC00299-202ENST00000442956 TRAV20A0A0B4J274 112 aa11.62□□□□□ -0.55
LINC00299-202ENST00000442956 EIF3GO75821 320 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC00299-202ENST00000442956 IGHV4-38-2P0DP08 117 aa11.62□□□□□ -0.55
LINC00299-202ENST00000442956 M6PRP20645 277 aa11.62□□□□□ -0.55
LINC00299-202ENST00000442956 FXYD3Q14802 87 aa11.62□□□□□ -0.55
LINC00299-202ENST00000442956 MIC13Q5XKP0 118 aa11.62□□□□□ -0.55
LINC00299-202ENST00000442956 SCRT1Q9BWW7 348 aa11.62□□□□□ -0.55
LINC00299-202ENST00000442956 FNDC4Q9H6D8 234 aaPredicted RBP11.62□□□□□ -0.55
LINC00299-202ENST00000442956 PXMP4Q9Y6I8 212 aa11.62□□□□□ -0.55
LINC00299-202ENST00000442956 ZANQ9Y493 2812 aa11.62□□□□□ -0.55
LINC00299-202ENST00000442956 CSMD1Q96PZ7 3565 aa11.62□□□□□ -0.55
LINC00299-202ENST00000442956 C9JQL5 133 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 MFAP2P55001 183 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 ACOT6Q3I5F7 207 aaPredicted RBP11.61□□□□□ -0.55
LINC00299-202ENST00000442956 GCSAMLQ5JQS6 135 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 Q5PR19 223 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 LINC01356Q8N9X3 169 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 MAPK1IP1LQ8NDC0 245 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 OR2T6Q8NHC8 308 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 ABHD5Q8WTS1 349 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 SLC35E1Q96K37 410 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 PBDC1Q9BVG4 233 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 SLC25A22Q9H936 323 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 KCNIP2Q9NS61 270 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 SLC39A9Q9NUM3 307 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 IGKV1OR2-108A0A075B7D4 117 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 MAP1LC3B2A6NCE7 125 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 RNF223E7ERA6 249 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 SOX15O60248 233 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 YIF1AO95070 293 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 GATA3P23771 443 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 FGF8P55075 233 aaPredicted RBP11.61□□□□□ -0.55
LINC00299-202ENST00000442956 PVRIGQ6DKI7 326 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 CCDC28AQ8IWP9 274 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 OR1P1Q8NH06 330 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 MISP3Q96FF7 219 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 ACY3Q96HD9 319 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 SRSF8Q9BRL6 282 aaKnown RBP11.61□□□□□ -0.55
LINC00299-202ENST00000442956 MAP1LC3BQ9GZQ8 125 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 CREBBPQ92793 2442 aa11.61□□□□□ -0.55
LINC00299-202ENST00000442956 GCN1Q92616 2671 aaKnown RBP11.61□□□□□ -0.55
LINC00299-202ENST00000442956 IGHV3-48P01763 117 aa11.6□□□□□ -0.55
LINC00299-202ENST00000442956 DEFA4P12838 97 aa11.6□□□□□ -0.55
LINC00299-202ENST00000442956 CX3CL1P78423 397 aa11.6□□□□□ -0.55
LINC00299-202ENST00000442956 PEA15Q15121 130 aa11.6□□□□□ -0.55
LINC00299-202ENST00000442956 FAM122CQ6P4D5 195 aa11.6□□□□□ -0.55
LINC00299-202ENST00000442956 ZNF562Q6V9R5 426 aa11.6□□□□□ -0.55
LINC00299-202ENST00000442956 FAM103A1Q9BTL3 118 aaKnown RBP11.6□□□□□ -0.55
LINC00299-202ENST00000442956 ACTR3CQ9C0K3 210 aaPredicted RBP11.6□□□□□ -0.55
LINC00299-202ENST00000442956 C1RLQ9NZP8 487 aa11.6□□□□□ -0.55
LINC00299-202ENST00000442956 F11RQ9Y624 299 aaKnown RBP11.6□□□□□ -0.55
LINC00299-202ENST00000442956 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.6□□□□□ -0.55
LINC00299-202ENST00000442956 ABCA1O95477 2261 aa11.6□□□□□ -0.55
LINC00299-202ENST00000442956 HMGB3O15347 200 aaKnown RBP11.6□□□□□ -0.55
LINC00299-202ENST00000442956 APOC3P02656 99 aa11.6□□□□□ -0.55
LINC00299-202ENST00000442956 B2MP61769 119 aa11.6□□□□□ -0.55
LINC00299-202ENST00000442956 LOXL1Q08397 574 aaPredicted RBP11.6□□□□□ -0.55
LINC00299-202ENST00000442956 STPG3Q8N7X2 389 aa11.6□□□□□ -0.55
LINC00299-202ENST00000442956 A0A0U1RQK1 487 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 CTXND1A0A1B0GTU2 59 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 CYB5BO43169 146 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 ADCYAP1P18509 176 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 RPL29P47914 159 aaKnown RBP11.59□□□□□ -0.55
LINC00299-202ENST00000442956 HAGHQ16775 308 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 Q8N9W7 124 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 RAB24Q969Q5 203 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 RARRES2Q99969 163 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 RBFOX3A6NFN3 312 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 F8W036 122 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 AVPP01185 164 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 SFTA3P0C7M3 94 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 OR10J1P30954 320 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 PPT1P50897 306 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 NDPQ00604 133 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 ARPC1AQ92747 370 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 MBD6Q96DN6 1003 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 GNG13Q9P2W3 67 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 SLC45A2Q9UMX9 530 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 DMRT1Q9Y5R6 373 aa11.59□□□□□ -0.55
LINC00299-202ENST00000442956 CDC34P49427 236 aaPredicted RBP11.58□□□□□ -0.56
LINC00299-202ENST00000442956 PRR20EP86478 221 aa11.58□□□□□ -0.56
LINC00299-202ENST00000442956 PRR20CP86479 221 aa11.58□□□□□ -0.56
LINC00299-202ENST00000442956 PRR20DP86480 221 aa11.58□□□□□ -0.56
LINC00299-202ENST00000442956 PRR20BP86481 221 aa11.58□□□□□ -0.56
LINC00299-202ENST00000442956 PRR20AP86496 221 aa11.58□□□□□ -0.56
LINC00299-202ENST00000442956 KLF17Q5JT82 389 aaPredicted RBP11.58□□□□□ -0.56
LINC00299-202ENST00000442956 NPIPB3Q92617 1050 aa11.58□□□□□ -0.56
LINC00299-202ENST00000442956 MRPL36Q9P0J6 103 aaKnown RBP11.58□□□□□ -0.56
LINC00299-202ENST00000442956 SEC14L6B5MCN3 397 aa11.58□□□□□ -0.56
LINC00299-202ENST00000442956 CORTO00230 105 aa11.58□□□□□ -0.56
LINC00299-202ENST00000442956 TGFAP01135 160 aa11.58□□□□□ -0.56
LINC00299-202ENST00000442956 CTRB1P17538 263 aa11.58□□□□□ -0.56
LINC00299-202ENST00000442956 CTRB2Q6GPI1 263 aa11.58□□□□□ -0.56
LINC00299-202ENST00000442956 ETFRF1Q6IPR1 90 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms