RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 SPINK9Q5DT21 86 aa16.68■□□□□ 0.26
HDLBP-220ENST00000442730 UXS1Q8NBZ7 420 aa16.68■□□□□ 0.26
HDLBP-220ENST00000442730 TMEM230Q96A57 120 aa16.68■□□□□ 0.26
HDLBP-220ENST00000442730 CHRDL1Q9BU40 450 aa16.68■□□□□ 0.26
HDLBP-220ENST00000442730 SELENOKQ9Y6D0 94 aa16.68■□□□□ 0.26
HDLBP-220ENST00000442730 LINC00854A0A1B0GVQ3 168 aa16.67■□□□□ 0.26
HDLBP-220ENST00000442730 ST8SIA3O43173 380 aa16.67■□□□□ 0.26
HDLBP-220ENST00000442730 ADMP35318 185 aa16.67■□□□□ 0.26
HDLBP-220ENST00000442730 CD81P60033 236 aa16.67■□□□□ 0.26
HDLBP-220ENST00000442730 SPSB3Q6PJ21 355 aa16.67■□□□□ 0.26
HDLBP-220ENST00000442730 TMEM61Q8N0U2 210 aa16.67■□□□□ 0.26
HDLBP-220ENST00000442730 S100ZQ8WXG8 99 aa16.67■□□□□ 0.26
HDLBP-220ENST00000442730 WDR89Q96FK6 387 aaPredicted RBP16.67■□□□□ 0.26
HDLBP-220ENST00000442730 RCHY1Q96PM5 261 aa16.67■□□□□ 0.26
HDLBP-220ENST00000442730 PALMDQ9NP74 551 aa16.67■□□□□ 0.26
HDLBP-220ENST00000442730 UFC1Q9Y3C8 167 aa16.67■□□□□ 0.26
HDLBP-220ENST00000442730 NAP1L6A6NFF2 107 aa16.66■□□□□ 0.26
HDLBP-220ENST00000442730 I3L2K1 104 aa16.66■□□□□ 0.26
HDLBP-220ENST00000442730 CDS2O95674 445 aa16.66■□□□□ 0.26
HDLBP-220ENST00000442730 C8orf88P0DMB2 117 aa16.66■□□□□ 0.26
HDLBP-220ENST00000442730 ELLP55199 621 aaPredicted RBP16.66■□□□□ 0.26
HDLBP-220ENST00000442730 RBMS2Q15434 407 aaKnown RBP16.66■□□□□ 0.26
HDLBP-220ENST00000442730 GUCA2BQ16661 112 aa16.66■□□□□ 0.26
HDLBP-220ENST00000442730 BTNL8Q6UX41 500 aa16.66■□□□□ 0.26
HDLBP-220ENST00000442730 TMED4Q7Z7H5 227 aa16.66■□□□□ 0.26
HDLBP-220ENST00000442730 SLC35G3Q8N808 338 aa16.66■□□□□ 0.26
HDLBP-220ENST00000442730 UBAC2Q8NBM4 344 aa16.66■□□□□ 0.26
HDLBP-220ENST00000442730 RNASE11Q8TAA1 199 aaKnown RBP16.66■□□□□ 0.26
HDLBP-220ENST00000442730 LHFPL5Q8TAF8 219 aa16.66■□□□□ 0.26
HDLBP-220ENST00000442730 MARC2Q969Z3 335 aa16.66■□□□□ 0.26
HDLBP-220ENST00000442730 MISP3Q96FF7 219 aa16.66■□□□□ 0.26
HDLBP-220ENST00000442730 SLC25A21Q9BQT8 299 aaPredicted RBP16.66■□□□□ 0.26
HDLBP-220ENST00000442730 TM2D3Q9BRN9 247 aa16.66■□□□□ 0.26
HDLBP-220ENST00000442730 CCDC32Q9BV29 185 aa16.66■□□□□ 0.26
HDLBP-220ENST00000442730 INS-IGF2F8WCM5 200 aa16.65■□□□□ 0.26
HDLBP-220ENST00000442730 AKR1C4P17516 323 aa16.65■□□□□ 0.26
HDLBP-220ENST00000442730 CCR6P51684 374 aa16.65■□□□□ 0.26
HDLBP-220ENST00000442730 DHODHQ02127 395 aa16.65■□□□□ 0.26
HDLBP-220ENST00000442730 Q56UQ5 140 aa16.65■□□□□ 0.26
HDLBP-220ENST00000442730 GLYATL2Q8WU03 294 aa16.65■□□□□ 0.26
HDLBP-220ENST00000442730 RRNAD1Q96FB5 475 aaKnown RBP16.65■□□□□ 0.26
HDLBP-220ENST00000442730 NEURL2Q9BR09 285 aa16.65■□□□□ 0.26
HDLBP-220ENST00000442730 C7orf50Q9BRJ6 194 aaKnown RBP16.65■□□□□ 0.26
HDLBP-220ENST00000442730 DNAH7Q8WXX0 4024 aa16.65■□□□□ 0.26
HDLBP-220ENST00000442730 CENPXA8MT69 81 aa16.64■□□□□ 0.25
HDLBP-220ENST00000442730 MT-CO2P00403 227 aa16.64■□□□□ 0.25
HDLBP-220ENST00000442730 IFNA17P01571 189 aa16.64■□□□□ 0.25
HDLBP-220ENST00000442730 CD7P09564 240 aa16.64■□□□□ 0.25
HDLBP-220ENST00000442730 ERHP84090 104 aaKnown RBP16.64■□□□□ 0.25
HDLBP-220ENST00000442730 GALNT14Q96FL9 552 aa16.64■□□□□ 0.25
HDLBP-220ENST00000442730 ZNF414Q96IQ9 312 aa16.64■□□□□ 0.25
HDLBP-220ENST00000442730 DAZ1Q9NQZ3 744 aaKnown RBP16.64■□□□□ 0.25
HDLBP-220ENST00000442730 KMT2CQ8NEZ4 4911 aaKnown RBP16.63■□□□□ 0.25
HDLBP-220ENST00000442730 NDUFA4O00483 81 aa16.63■□□□□ 0.25
HDLBP-220ENST00000442730 CTSGP08311 255 aa16.63■□□□□ 0.25
HDLBP-220ENST00000442730 FCGR2BP31994 310 aaPredicted RBP16.63■□□□□ 0.25
HDLBP-220ENST00000442730 AARDQ4LEZ3 155 aa16.63■□□□□ 0.25
HDLBP-220ENST00000442730 Q6ZRM9 215 aa16.63■□□□□ 0.25
HDLBP-220ENST00000442730 FAM219AQ8IW50 185 aa16.63■□□□□ 0.25
HDLBP-220ENST00000442730 SELENOHQ8IZQ5 122 aaKnown RBP16.63■□□□□ 0.25
HDLBP-220ENST00000442730 RBPMSQ93062 196 aaKnown RBP16.63■□□□□ 0.25
HDLBP-220ENST00000442730 PDCD10Q9BUL8 212 aa16.63■□□□□ 0.25
HDLBP-220ENST00000442730 WDR12Q9GZL7 423 aaKnown RBP16.63■□□□□ 0.25
HDLBP-220ENST00000442730 TUBA4BQ9H853 241 aa16.63■□□□□ 0.25
HDLBP-220ENST00000442730 ZMAT4Q9H898 229 aa16.63■□□□□ 0.25
HDLBP-220ENST00000442730 GAR1Q9NY12 217 aaKnown RBP16.63■□□□□ 0.25
HDLBP-220ENST00000442730 MRPL27Q9P0M9 148 aaKnown RBP16.63■□□□□ 0.25
HDLBP-220ENST00000442730 BTCP35070 178 aa16.62■□□□□ 0.25
HDLBP-220ENST00000442730 HOXA1P49639 335 aaPredicted RBP16.62■□□□□ 0.25
HDLBP-220ENST00000442730 SUPT4H1P63272 117 aaKnown RBP16.62■□□□□ 0.25
HDLBP-220ENST00000442730 TMEM268Q5VZI3 342 aa16.62■□□□□ 0.25
HDLBP-220ENST00000442730 WFDC10AQ9H1F0 79 aa16.62■□□□□ 0.25
HDLBP-220ENST00000442730 PRR13Q9NZ81 148 aa16.62■□□□□ 0.25
HDLBP-220ENST00000442730 KCNIP3Q9Y2W7 256 aa16.62■□□□□ 0.25
HDLBP-220ENST00000442730 NBEAL2Q6ZNJ1 2754 aa16.61■□□□□ 0.25
HDLBP-220ENST00000442730 NDUFB6O95139 128 aa16.61■□□□□ 0.25
HDLBP-220ENST00000442730 IGHV3-48P01763 117 aa16.61■□□□□ 0.25
HDLBP-220ENST00000442730 ANXA3P12429 323 aa16.61■□□□□ 0.25
HDLBP-220ENST00000442730 MFAP4P55083 255 aa16.61■□□□□ 0.25
HDLBP-220ENST00000442730 TMEM187Q14656 261 aa16.61■□□□□ 0.25
HDLBP-220ENST00000442730 HAGHQ16775 308 aa16.61■□□□□ 0.25
HDLBP-220ENST00000442730 PVRIGQ6DKI7 326 aa16.61■□□□□ 0.25
HDLBP-220ENST00000442730 CENPSQ8N2Z9 138 aa16.61■□□□□ 0.25
HDLBP-220ENST00000442730 PINX1Q96BK5 328 aaKnown RBP16.61■□□□□ 0.25
HDLBP-220ENST00000442730 TXN2Q99757 166 aa16.61■□□□□ 0.25
HDLBP-220ENST00000442730 TMEM56-RWDD3S4R434 201 aa16.61■□□□□ 0.25
HDLBP-220ENST00000442730 IGHV3OR16-8A0A075B7F1 116 aa16.6■□□□□ 0.25
HDLBP-220ENST00000442730 SCAF4O95104 1147 aaKnown RBP16.6■□□□□ 0.25
HDLBP-220ENST00000442730 RNASE2P10153 161 aaKnown RBP16.6■□□□□ 0.25
HDLBP-220ENST00000442730 VAMP1P23763 118 aa16.6■□□□□ 0.25
HDLBP-220ENST00000442730 SNCAP37840 140 aa16.6■□□□□ 0.25
HDLBP-220ENST00000442730 SRPXP78539 464 aa16.6■□□□□ 0.25
HDLBP-220ENST00000442730 ZNF846Q147U1 533 aa16.6■□□□□ 0.25
HDLBP-220ENST00000442730 TMEM128Q5BJH2 165 aa16.6■□□□□ 0.25
HDLBP-220ENST00000442730 DEFB125Q8N687 156 aa16.6■□□□□ 0.25
HDLBP-220ENST00000442730 IL22RA2Q969J5 263 aa16.6■□□□□ 0.25
HDLBP-220ENST00000442730 C20orf24Q9BUV8 137 aa16.6■□□□□ 0.25
HDLBP-220ENST00000442730 TRAV25A0A0B4J276 109 aa16.59■□□□□ 0.25
HDLBP-220ENST00000442730 NUPL2O15504 423 aaKnown RBP16.59■□□□□ 0.25
HDLBP-220ENST00000442730 LYRM1O43325 122 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms