RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 TOMM40LQ969M1 308 aa5.25□□□□□ -1.57
HDAC6-210ENST00000441703 NEIL1Q96FI4 390 aaPredicted RBP5.25□□□□□ -1.57
HDAC6-210ENST00000441703 OR4F4Q96R69 305 aa5.25□□□□□ -1.57
HDAC6-210ENST00000441703 HSPB9Q9BQS6 159 aa5.25□□□□□ -1.57
HDAC6-210ENST00000441703 PARLQ9H300 379 aa5.25□□□□□ -1.57
HDAC6-210ENST00000441703 PATZ1Q9HBE1 687 aaKnown RBP5.25□□□□□ -1.57
HDAC6-210ENST00000441703 ZNF286AQ9HBT8 521 aa5.25□□□□□ -1.57
HDAC6-210ENST00000441703 ZNF586Q9NXT0 402 aa5.25□□□□□ -1.57
HDAC6-210ENST00000441703 ZNF581Q9P0T4 197 aa5.25□□□□□ -1.57
HDAC6-210ENST00000441703 UBE2J1Q9Y385 318 aaPredicted RBP5.25□□□□□ -1.57
HDAC6-210ENST00000441703 PAM16Q9Y3D7 125 aa5.25□□□□□ -1.57
HDAC6-210ENST00000441703 TRBV9A0A0B4J1U6 114 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 CTXND1A0A1B0GTU2 59 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 DIRC3C9JPN6 131 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 SLC33A1O00400 549 aaPredicted RBP5.24□□□□□ -1.57
HDAC6-210ENST00000441703 HYPMO75409 117 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 CST7O76096 145 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 TMEM50AO95807 157 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 IGHV4-59P01825 116 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 GPX1P07203 203 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 CRISP2P16562 243 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 ADMP35318 185 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 FMODQ06828 376 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 RNF151Q2KHN1 245 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 SPATA45Q537H7 98 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 OCIAD2Q56VL3 154 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 FAM78BQ5VT40 261 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 Q6ZN92 141 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 FAM57BQ71RH2 274 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 H1FNTQ75WM6 255 aaPredicted RBP5.24□□□□□ -1.57
HDAC6-210ENST00000441703 C6orf201Q7Z4U5 140 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 OR5D13Q8NGL4 314 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 OR1L6Q8NGR2 347 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 MRPL30Q8TCC3 161 aaKnown RBP5.24□□□□□ -1.57
HDAC6-210ENST00000441703 VN1R17PQ8TDU5 208 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 OR5P3Q8WZ94 311 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 DPF1Q92782 380 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 LHX4Q969G2 390 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 GPR146Q96CH1 333 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 RPUSD4Q96CM3 377 aaKnown RBP5.24□□□□□ -1.57
HDAC6-210ENST00000441703 NUDT11Q96G61 164 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 SPACA5Q96QH8 159 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 TXNDC17Q9BRA2 123 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 VPS25Q9BRG1 176 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 RPUSD1Q9UJJ7 312 aaKnown RBP5.24□□□□□ -1.57
HDAC6-210ENST00000441703 TP53TG3Q9ULZ0 132 aa5.24□□□□□ -1.57
HDAC6-210ENST00000441703 HERC2O95714 4834 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 STAB2Q8WWQ8 2551 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 LYSTQ99698 3801 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 LOC102725191A0A1B0GVB3 256 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 IGLC7A0M8Q6 106 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 CBY3A6NI87 242 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 J3QR06 171 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 K7ERU9 68 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 IFNL4K9M1U5 179 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 SIRPB1O00241 398 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 DEGS1O15121 323 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 ADAM20O43506 726 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 RAMP3O60896 148 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 ZNF253O75346 499 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 MSR1P21757 451 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 TSPOP30536 169 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 BMI1P35226 326 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 PRRX1P54821 245 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 CLDN17P56750 224 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 LINC00310P59036 64 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 HBG1P69891 147 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 HBG2P69892 147 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 MRPS34P82930 218 aaKnown RBP5.23□□□□□ -1.57
HDAC6-210ENST00000441703 PMCHL1Q16048 86 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 LRRC10Q5BKY1 277 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 SLC25A47Q6Q0C1 308 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 C19orf35Q6ZS72 473 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 UEVLDQ8IX04 471 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 TMEM217Q8N7C4 229 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 ZNF709Q8N972 641 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 CFHR4Q92496 578 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 TNFRSF14Q92956 283 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 ZNF837Q96EG3 531 aaPredicted RBP5.23□□□□□ -1.57
HDAC6-210ENST00000441703 TXN2Q99757 166 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 MRPL13Q9BYD1 178 aaKnown RBP5.23□□□□□ -1.57
HDAC6-210ENST00000441703 WDR61Q9GZS3 305 aaKnown RBP5.23□□□□□ -1.57
HDAC6-210ENST00000441703 CST9LQ9H4G1 147 aa5.23□□□□□ -1.57
HDAC6-210ENST00000441703 IGKV1D-43A0A0B4J1Z2 117 aa5.22□□□□□ -1.57
HDAC6-210ENST00000441703 OR5B21A6NL26 309 aa5.22□□□□□ -1.57
HDAC6-210ENST00000441703 TNFRSF13BO14836 293 aaPredicted RBP5.22□□□□□ -1.57
HDAC6-210ENST00000441703 SPRY3O43610 288 aa5.22□□□□□ -1.57
HDAC6-210ENST00000441703 PDE6DO43924 150 aa5.22□□□□□ -1.57
HDAC6-210ENST00000441703 SERF1AO75920 110 aa5.22□□□□□ -1.57
HDAC6-210ENST00000441703 TOX4O94842 621 aa5.22□□□□□ -1.57
HDAC6-210ENST00000441703 PPYP01298 95 aa5.22□□□□□ -1.57
HDAC6-210ENST00000441703 ADH4P08319 380 aa5.22□□□□□ -1.57
HDAC6-210ENST00000441703 CTXN2P0C2S0 81 aa5.22□□□□□ -1.57
HDAC6-210ENST00000441703 B4GALT1P15291 398 aa5.22□□□□□ -1.57
HDAC6-210ENST00000441703 GNRHRP30968 328 aa5.22□□□□□ -1.57
HDAC6-210ENST00000441703 FGF8P55075 233 aaPredicted RBP5.22□□□□□ -1.57
HDAC6-210ENST00000441703 FXYD4P59646 89 aa5.22□□□□□ -1.57
HDAC6-210ENST00000441703 SNAI3Q3KNW1 292 aa5.22□□□□□ -1.57
HDAC6-210ENST00000441703 MAJINQ3KP22 176 aa5.22□□□□□ -1.57
HDAC6-210ENST00000441703 TMEM155Q4W5P6 130 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms