RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 VSIRQ9H7M9 311 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 TPSG1Q9NRR2 321 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 DMXL1Q9Y485 3027 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 TRAV30A0A087WSZ9 112 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 CLN5O75503 358 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 CNTFRP26992 372 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 PNRC1Q12796 327 aaPredicted RBP4.82□□□□□ -1.64
VPS50-205ENST00000441602 RHEBQ15382 184 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 ZNF562Q6V9R5 426 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 PQLC2Q6ZP29 291 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.82□□□□□ -1.64
VPS50-205ENST00000441602 THAP8Q8NA92 274 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 CLRN3Q8NCR9 226 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 TRGV9Q99603 122 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 SMCO4Q9NRQ5 59 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 PITPNC1Q9UKF7 332 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 FUT9Q9Y231 359 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 A0A0C4DFX4 3053 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 IGHV4-30-2A0A087WSY4 118 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 TCRBV4S1A1TA0A5B7 111 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 TMEM250H0YL14 139 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 CCL20P78556 96 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 SRSF3P84103 164 aaKnown RBP4.82□□□□□ -1.64
VPS50-205ENST00000441602 STXBP6Q8NFX7 210 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 NPIPB3Q92617 1050 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 TVP23CQ96ET8 276 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 C7orf69Q9H7B7 122 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 TNFRSF19Q9NS68 423 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 ARL2-SNX15V9GYD0 113 aa4.82□□□□□ -1.64
VPS50-205ENST00000441602 ELOA3CA0A087WX78 387 aaPredicted RBP4.81□□□□□ -1.64
VPS50-205ENST00000441602 NPIPB5A8MRT5 1133 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 PDE6DO43924 150 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 REG1AP05451 166 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 LINC00869P0C866 280 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 STAG3L2P0CL84 134 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 STAG3L3P0CL85 134 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 RNF224P0DH78 156 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 PRR20EP86478 221 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 PRR20CP86479 221 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 PRR20DP86480 221 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 PRR20BP86481 221 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 PRR20AP86496 221 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 MEF2BQ02080 365 aaPredicted RBP4.81□□□□□ -1.64
VPS50-205ENST00000441602 BTN1A1Q13410 526 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 ZNF726P1Q15940 193 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 AKIRIN2Q53H80 203 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 FAM78BQ5VT40 261 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 TMEM190Q8WZ59 177 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 RITA1Q96K30 269 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 GAR1Q9NY12 217 aaKnown RBP4.81□□□□□ -1.64
VPS50-205ENST00000441602 MOB4Q9Y3A3 225 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 PUS1Q9Y606 427 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS50-205ENST00000441602 B4DEV8 164 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 M0QZK8 103 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 YIF1AO95070 293 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 HLA-DRB1P01911 266 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 C8orf88P0DMB2 117 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 AREGP15514 252 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 C10orf113Q5VZT2 155 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 CST9LP1Q5W188 147 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 PVRIGQ6DKI7 326 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 Q8N6K4 173 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 OR4F5Q8NH21 305 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 OR4X1Q8NH49 305 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 OR4F4Q96R69 305 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 WNT10AQ9GZT5 417 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 DNAJC4Q9NNZ3 241 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 RPS10P5Q9NQ39 176 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 MYO15AQ9UKN7 3530 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 TRAV40A0A0B4J280 105 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 CENPVL3A0A0U1RRI6 287 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 ZNF727A8MUV8 499 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 TEX22C9J3V5 150 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 CRYGCP07315 174 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 GCHFRP30047 84 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 MFAP4P55083 255 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 CX3CL1P78423 397 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 GUCA2BQ16661 112 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 DEFB113Q30KQ7 82 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 RARRES2Q99969 163 aa4.81□□□□□ -1.64
VPS50-205ENST00000441602 SPEGQ15772 3267 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 CGB1A6NKQ9 187 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 PAGE4O60829 102 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 HYPMO75409 117 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 SCO1O75880 301 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 OR5G3P0C626 314 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 LOXL1Q08397 574 aaPredicted RBP4.8□□□□□ -1.64
VPS50-205ENST00000441602 C16orf82Q7Z2V1 217 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 OR2T6Q8NHC8 308 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 RBM14Q96PK6 669 aaKnown RBP4.8□□□□□ -1.64
VPS50-205ENST00000441602 SLC25A33Q9BSK2 321 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 HIF1ANQ9NWT6 349 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 NAT8Q9UHE5 227 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 C11orf94C9JXX5 98 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 FCN1O00602 326 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 HMGB3O15347 200 aaKnown RBP4.8□□□□□ -1.64
VPS50-205ENST00000441602 OR7C2O60412 319 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 ARL14EPLP0DKL9 152 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 CTRB1P17538 263 aa4.8□□□□□ -1.64
VPS50-205ENST00000441602 ADCYAP1P18509 176 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms