RNA–Protein interactions for RNA: ENST00000441366.6

EPB42-202, Transcript of erythrocyte membrane protein band 4.2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPB42, Length 2,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-202ENST00000441366 TIMD4Q96H15 378 aa10.79□□□□□ -0.68
EPB42-202ENST00000441366 WDR61Q9GZS3 305 aaKnown RBP10.79□□□□□ -0.68
EPB42-202ENST00000441366 C15orf61A6NNL5 157 aa10.78□□□□□ -0.68
EPB42-202ENST00000441366 LINC00614P0C842 121 aa10.78□□□□□ -0.68
EPB42-202ENST00000441366 SAA1P0DJI8 122 aaPredicted RBP10.78□□□□□ -0.68
EPB42-202ENST00000441366 ANKRD39Q53RE8 183 aa10.78□□□□□ -0.68
EPB42-202ENST00000441366 NEU4Q8WWR8 484 aaPredicted RBP10.78□□□□□ -0.68
EPB42-202ENST00000441366 RPUSD4Q96CM3 377 aaKnown RBP10.78□□□□□ -0.68
EPB42-202ENST00000441366 HARBI1Q96MB7 349 aa10.78□□□□□ -0.68
EPB42-202ENST00000441366 FLNCQ14315 2725 aa10.78□□□□□ -0.68
EPB42-202ENST00000441366 IGHV2-26A0A0B4J1V2 119 aa10.77□□□□□ -0.68
EPB42-202ENST00000441366 MAP1LC3B2A6NCE7 125 aa10.77□□□□□ -0.68
EPB42-202ENST00000441366 ENSAO43768 121 aaKnown RBP10.77□□□□□ -0.68
EPB42-202ENST00000441366 APOA2P02652 100 aa10.77□□□□□ -0.68
EPB42-202ENST00000441366 OR10J1P30954 320 aa10.77□□□□□ -0.68
EPB42-202ENST00000441366 CNN1P51911 297 aaKnown RBP10.77□□□□□ -0.68
EPB42-202ENST00000441366 ARF6P62330 175 aa10.77□□□□□ -0.68
EPB42-202ENST00000441366 OR2T10Q8NGZ9 312 aa10.77□□□□□ -0.68
EPB42-202ENST00000441366 RITA1Q96K30 269 aa10.77□□□□□ -0.68
EPB42-202ENST00000441366 BBC3Q96PG8 261 aaPredicted RBP10.77□□□□□ -0.68
EPB42-202ENST00000441366 NABP2Q9BQ15 211 aa10.77□□□□□ -0.68
EPB42-202ENST00000441366 MAP1LC3BQ9GZQ8 125 aa10.77□□□□□ -0.68
EPB42-202ENST00000441366 OR51B2Q9Y5P1 312 aa10.77□□□□□ -0.68
EPB42-202ENST00000441366 FAM90A9PA6NNJ1 464 aa10.77□□□□□ -0.69
EPB42-202ENST00000441366 IFNA1P01562 189 aa10.77□□□□□ -0.69
EPB42-202ENST00000441366 TYMSP04818 313 aa10.77□□□□□ -0.69
EPB42-202ENST00000441366 VDAC2P45880 294 aaPredicted RBP10.77□□□□□ -0.69
EPB42-202ENST00000441366 MEF2BQ02080 365 aaPredicted RBP10.77□□□□□ -0.69
EPB42-202ENST00000441366 ARSJQ5FYB0 599 aaPredicted RBP10.77□□□□□ -0.69
EPB42-202ENST00000441366 TMEM256Q8N2U0 113 aa10.77□□□□□ -0.69
EPB42-202ENST00000441366 OR5AN1Q8NGI8 311 aa10.77□□□□□ -0.69
EPB42-202ENST00000441366 IGFBPL1Q8WX77 278 aa10.77□□□□□ -0.69
EPB42-202ENST00000441366 TAF15Q92804 592 aaKnown RBP eCLIP10.77□□□□□ -0.69
EPB42-202ENST00000441366 ST6GALNAC6Q969X2 333 aa10.77□□□□□ -0.69
EPB42-202ENST00000441366 TMEM186Q96B77 213 aa10.77□□□□□ -0.69
EPB42-202ENST00000441366 FLYWCH2Q96CP2 140 aaKnown RBP10.77□□□□□ -0.69
EPB42-202ENST00000441366 A0A1B0GUS0 222 aa10.76□□□□□ -0.69
EPB42-202ENST00000441366 NUPR1O60356 82 aa10.76□□□□□ -0.69
EPB42-202ENST00000441366 LHX4Q969G2 390 aa10.76□□□□□ -0.69
EPB42-202ENST00000441366 TBX15Q96SF7 602 aa10.76□□□□□ -0.69
EPB42-202ENST00000441366 PSMG3Q9BT73 122 aaPredicted RBP10.76□□□□□ -0.69
EPB42-202ENST00000441366 CHODLQ9H9P2 273 aa10.76□□□□□ -0.69
EPB42-202ENST00000441366 TMEM14BQ9NUH8 114 aa10.76□□□□□ -0.69
EPB42-202ENST00000441366 HSPE1P61604 102 aaKnown RBP10.76□□□□□ -0.69
EPB42-202ENST00000441366 AARDQ4LEZ3 155 aa10.76□□□□□ -0.69
EPB42-202ENST00000441366 OR52E5Q8NH55 327 aa10.76□□□□□ -0.69
EPB42-202ENST00000441366 LPAR2Q9HBW0 351 aa10.76□□□□□ -0.69
EPB42-202ENST00000441366 A0A1W2PRD5 423 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 A0A1W2PRF3 423 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 A0A1W2PRM7 423 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 ZNF705FA8MVS1 300 aaPredicted RBP10.75□□□□□ -0.69
EPB42-202ENST00000441366 UPK2O00526 184 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 ZNF705DP0CH99 300 aaPredicted RBP10.75□□□□□ -0.69
EPB42-202ENST00000441366 ZNF705BP0CI00 300 aaPredicted RBP10.75□□□□□ -0.69
EPB42-202ENST00000441366 BRS3P32247 399 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 TMEM41BQ5BJD5 291 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 DMRTA1Q5VZB9 504 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 PNKDQ8N490 385 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 LINC00311Q8N616 119 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 PINX1Q96BK5 328 aaKnown RBP10.75□□□□□ -0.69
EPB42-202ENST00000441366 MS4A10Q96PG2 267 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 TMEM147Q9BVK8 224 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 PARLQ9H300 379 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 FOXA2Q9Y261 457 aaPredicted RBP10.75□□□□□ -0.69
EPB42-202ENST00000441366 CSMD1Q96PZ7 3565 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 USP9XQ93008 2570 aaPredicted RBP10.75□□□□□ -0.69
EPB42-202ENST00000441366 HMGB3O15347 200 aaKnown RBP10.75□□□□□ -0.69
EPB42-202ENST00000441366 DEFA4P12838 97 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 GPR6P46095 362 aaPredicted RBP10.75□□□□□ -0.69
EPB42-202ENST00000441366 SERF2P84101 59 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 TDRG1Q3Y452 100 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 MRPL52Q86TS9 123 aaKnown RBP10.75□□□□□ -0.69
EPB42-202ENST00000441366 OR10W1Q8NGF6 305 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 ZNF596Q8TC21 504 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 ANAPC16Q96DE5 110 aa10.75□□□□□ -0.69
EPB42-202ENST00000441366 SSBP3Q9BWW4 388 aaPredicted RBP10.75□□□□□ -0.69
EPB42-202ENST00000441366 PATZ1Q9HBE1 687 aaKnown RBP10.75□□□□□ -0.69
EPB42-202ENST00000441366 TEX50A0A1B0GTY4 177 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 E7EUB6 86 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 LIPFP07098 398 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 CD33P20138 364 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 POU2AF1Q16633 256 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 HLA-DRB5Q30154 266 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 ARL6IP6Q8N6S5 226 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 OR4C13Q8NGP0 309 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 CLEC7AQ9BXN2 247 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 ENY2Q9NPA8 101 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 UTP20O75691 2785 aaKnown RBP10.74□□□□□ -0.69
EPB42-202ENST00000441366 TMEM250H0YL14 139 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 FSTL3O95633 263 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 IGKV1D-33P01593 117 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 IGKV1-33P01594 117 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 IGLV1-47P01700 117 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 IGFBP2P18065 325 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 SRP14P37108 136 aaKnown RBP10.74□□□□□ -0.69
EPB42-202ENST00000441366 PRRX1P54821 245 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 RPL15P61313 204 aaKnown RBP10.74□□□□□ -0.69
EPB42-202ENST00000441366 KLRD1Q13241 179 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 C10orf55Q5SWW7 151 aa10.74□□□□□ -0.69
EPB42-202ENST00000441366 ACSM6Q6P461 480 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms