RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 FNDC4Q9H6D8 234 aaPredicted RBP15.11■□□□□ 0.01
SNX17-203ENST00000440760 DMRT1Q9Y5R6 373 aa15.11■□□□□ 0.01
SNX17-203ENST00000440760 FSHBP01225 129 aa15.11■□□□□ 0.01
SNX17-203ENST00000440760 OPRK1P41145 380 aa15.11■□□□□ 0.01
SNX17-203ENST00000440760 CAMLGP49069 296 aa15.11■□□□□ 0.01
SNX17-203ENST00000440760 DEFB112Q30KQ8 113 aa15.11■□□□□ 0.01
SNX17-203ENST00000440760 ZNF562Q6V9R5 426 aa15.11■□□□□ 0.01
SNX17-203ENST00000440760 MRPL41Q8IXM3 137 aaKnown RBP15.11■□□□□ 0.01
SNX17-203ENST00000440760 MISP3Q96FF7 219 aa15.11■□□□□ 0.01
SNX17-203ENST00000440760 IGHV3-21A0A0B4J1V1 117 aa15.1■□□□□ 0.01
SNX17-203ENST00000440760 I3L521 148 aa15.1■□□□□ 0.01
SNX17-203ENST00000440760 HLA-DRB1P01911 266 aa15.1■□□□□ 0.01
SNX17-203ENST00000440760 CD69Q07108 199 aa15.1■□□□□ 0.01
SNX17-203ENST00000440760 AANATQ16613 207 aa15.1■□□□□ 0.01
SNX17-203ENST00000440760 ASPHD1Q5U4P2 390 aa15.1■□□□□ 0.01
SNX17-203ENST00000440760 ACSM6Q6P461 480 aa15.1■□□□□ 0.01
SNX17-203ENST00000440760 SLC16A13Q7RTY0 426 aa15.1■□□□□ 0.01
SNX17-203ENST00000440760 C5orf56Q8N8D9 126 aa15.1■□□□□ 0.01
SNX17-203ENST00000440760 ZNF114Q8NC26 417 aa15.1■□□□□ 0.01
SNX17-203ENST00000440760 MGST2Q99735 147 aa15.1■□□□□ 0.01
SNX17-203ENST00000440760 PSMG3Q9BT73 122 aaPredicted RBP15.1■□□□□ 0.01
SNX17-203ENST00000440760 HRH4Q9H3N8 390 aa15.1■□□□□ 0.01
SNX17-203ENST00000440760 SONP18583 2426 aaKnown RBP15.09■□□□□ 0.01
SNX17-203ENST00000440760 A0A1B0GV50 99 aa15.09■□□□□ 0.01
SNX17-203ENST00000440760 SUB1P53999 127 aaKnown RBP eCLIP15.09■□□□□ 0.01
SNX17-203ENST00000440760 ATP5IP56385 69 aaPredicted RBP15.09■□□□□ 0.01
SNX17-203ENST00000440760 GAMTQ14353 236 aa15.09■□□□□ 0.01
SNX17-203ENST00000440760 AKR1C8PQ5T2L2 129 aa15.09■□□□□ 0.01
SNX17-203ENST00000440760 OR2T6Q8NHC8 308 aa15.09■□□□□ 0.01
SNX17-203ENST00000440760 RBM14Q96PK6 669 aaKnown RBP15.09■□□□□ 0.01
SNX17-203ENST00000440760 MOB4Q9Y3A3 225 aa15.09■□□□□ 0.01
SNX17-203ENST00000440760 F11RQ9Y624 299 aaKnown RBP15.09■□□□□ 0.01
SNX17-203ENST00000440760 MXRA5Q9NR99 2828 aa15.09■□□□□ 0.01
SNX17-203ENST00000440760 EIF3GO75821 320 aaKnown RBP eCLIP15.09■□□□□ 0.01
SNX17-203ENST00000440760 IL17RELQ6ZVW7 336 aa15.09■□□□□ 0.01
SNX17-203ENST00000440760 NANPQ8TBE9 248 aa15.09■□□□□ 0.01
SNX17-203ENST00000440760 NPVFQ9HCQ7 196 aa15.09■□□□□ 0.01
SNX17-203ENST00000440760 PARP11Q9NR21 331 aa15.09■□□□□ 0.01
SNX17-203ENST00000440760 MRPL36Q9P0J6 103 aaKnown RBP15.09■□□□□ 0.01
SNX17-203ENST00000440760 PFDN2Q9UHV9 154 aa15.09■□□□□ 0.01
SNX17-203ENST00000440760 EGR2P11161 476 aaPredicted RBP15.08■□□□□ 0
SNX17-203ENST00000440760 OR1P1Q8NH06 330 aa15.08■□□□□ 0
SNX17-203ENST00000440760 SAT2Q96F10 170 aaPredicted RBP15.08■□□□□ 0
SNX17-203ENST00000440760 ACY3Q96HD9 319 aa15.08■□□□□ 0
SNX17-203ENST00000440760 LSM4Q9Y4Z0 139 aaKnown RBP15.08■□□□□ 0
SNX17-203ENST00000440760 TIMM9Q9Y5J7 89 aa15.08■□□□□ 0
SNX17-203ENST00000440760 IGKV1OR2-108A0A075B7D4 117 aa15.07■□□□□ 0
SNX17-203ENST00000440760 AMY1AP04745 511 aa15.07■□□□□ 0
SNX17-203ENST00000440760 DEFA4P12838 97 aa15.07■□□□□ 0
SNX17-203ENST00000440760 CTRB1P17538 263 aa15.07■□□□□ 0
SNX17-203ENST00000440760 RAB2AP61019 212 aa15.07■□□□□ 0
SNX17-203ENST00000440760 CTRB2Q6GPI1 263 aa15.07■□□□□ 0
SNX17-203ENST00000440760 LFNGQ8NES3 379 aa15.07■□□□□ 0
SNX17-203ENST00000440760 RNASEH2CQ8TDP1 164 aaKnown RBP15.07■□□□□ 0
SNX17-203ENST00000440760 GGTLC1Q9BX51 225 aa15.07■□□□□ 0
SNX17-203ENST00000440760 WNT10AQ9GZT5 417 aa15.07■□□□□ 0
SNX17-203ENST00000440760 RPRMQ9NS64 109 aa15.07■□□□□ 0
SNX17-203ENST00000440760 A6NDX4 124 aa15.07■□□□□ 0
SNX17-203ENST00000440760 LINC01548A6NM66 108 aa15.07■□□□□ 0
SNX17-203ENST00000440760 UMAD1C9J7I0 102 aa15.07■□□□□ 0
SNX17-203ENST00000440760 ATP6V0E1O15342 81 aa15.07■□□□□ 0
SNX17-203ENST00000440760 RAB5CP51148 216 aa15.07■□□□□ 0
SNX17-203ENST00000440760 FFAR4Q5NUL3 377 aa15.07■□□□□ 0
SNX17-203ENST00000440760 TEPPQ6URK8 271 aa15.07■□□□□ 0
SNX17-203ENST00000440760 HSD17B13Q7Z5P4 300 aaPredicted RBP15.07■□□□□ 0
SNX17-203ENST00000440760 ZNF709Q8N972 641 aa15.07■□□□□ 0
SNX17-203ENST00000440760 SRSF8Q9BRL6 282 aaKnown RBP15.07■□□□□ 0
SNX17-203ENST00000440760 IGHV4-59P01825 116 aa15.06■□□□□ 0
SNX17-203ENST00000440760 BLOC1S1P78537 153 aa15.06■□□□□ 0
SNX17-203ENST00000440760 MIC13Q5XKP0 118 aa15.06■□□□□ 0
SNX17-203ENST00000440760 PVRIGQ6DKI7 326 aa15.06■□□□□ 0
SNX17-203ENST00000440760 SSX7Q7RTT5 188 aa15.06■□□□□ 0
SNX17-203ENST00000440760 CENPVQ7Z7K6 275 aaPredicted RBP15.06■□□□□ 0
SNX17-203ENST00000440760 SLC35E1Q96K37 410 aa15.06■□□□□ 0
SNX17-203ENST00000440760 TNFRSF19Q9NS68 423 aa15.06■□□□□ 0
SNX17-203ENST00000440760 TRIM77I1YAP6 450 aa15.05■□□□□ 0
SNX17-203ENST00000440760 AGPAT2O15120 278 aa15.05■□□□□ 0
SNX17-203ENST00000440760 DEFA5Q01523 94 aa15.05■□□□□ 0
SNX17-203ENST00000440760 KRTAP1-1Q07627 177 aa15.05■□□□□ 0
SNX17-203ENST00000440760 ECSCRQ19T08 205 aa15.05■□□□□ 0
SNX17-203ENST00000440760 GCSAMLQ5JQS6 135 aa15.05■□□□□ 0
SNX17-203ENST00000440760 MED9Q9NWA0 146 aa15.05■□□□□ 0
SNX17-203ENST00000440760 MFSD2BA6NFX1 497 aa15.05■□□□□ -0
SNX17-203ENST00000440760 FNDC10F2Z333 226 aa15.05■□□□□ -0
SNX17-203ENST00000440760 C17orf112F2Z3M2 114 aa15.05■□□□□ -0
SNX17-203ENST00000440760 SERF2P84101 59 aa15.05■□□□□ -0
SNX17-203ENST00000440760 ZNF726P1Q15940 193 aa15.05■□□□□ -0
SNX17-203ENST00000440760 ZNF48Q96MX3 618 aaPredicted RBP15.05■□□□□ -0
SNX17-203ENST00000440760 MPDU1O75352 247 aa15.04■□□□□ -0
SNX17-203ENST00000440760 MT-CO2P00403 227 aa15.04■□□□□ -0
SNX17-203ENST00000440760 GPX4P36969 197 aaPredicted RBP15.04■□□□□ -0
SNX17-203ENST00000440760 RND2P52198 227 aa15.04■□□□□ -0
SNX17-203ENST00000440760 BPIFB3P59826 476 aa15.04■□□□□ -0
SNX17-203ENST00000440760 TMEM41BQ5BJD5 291 aa15.04■□□□□ -0
SNX17-203ENST00000440760 TMEM144Q7Z5S9 345 aa15.04■□□□□ -0
SNX17-203ENST00000440760 OR5T1Q8NG75 326 aa15.04■□□□□ -0
SNX17-203ENST00000440760 PXMP4Q9Y6I8 212 aa15.04■□□□□ -0
SNX17-203ENST00000440760 C9orf152Q5JTZ5 239 aa15.04■□□□□ -0
SNX17-203ENST00000440760 CACNG8Q8WXS5 425 aa15.04■□□□□ -0
SNX17-203ENST00000440760 NPIPB3Q92617 1050 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms