RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CHRDL1Q9BU40 450 aa14.92□□□□□ -0.02
SHROOM1-204ENST00000440118 RETNQ9HD89 108 aa14.92□□□□□ -0.02
SHROOM1-204ENST00000440118 ENY2Q9NPA8 101 aa14.92□□□□□ -0.02
SHROOM1-204ENST00000440118 ZNF207O43670 478 aaKnown RBP14.91□□□□□ -0.02
SHROOM1-204ENST00000440118 YIF1AO95070 293 aa14.91□□□□□ -0.02
SHROOM1-204ENST00000440118 HOXA1P49639 335 aaPredicted RBP14.91□□□□□ -0.02
SHROOM1-204ENST00000440118 MFAP4P55083 255 aa14.91□□□□□ -0.02
SHROOM1-204ENST00000440118 SP6Q3SY56 376 aa14.91□□□□□ -0.02
SHROOM1-204ENST00000440118 LAMTOR1Q6IAA8 161 aa14.91□□□□□ -0.02
SHROOM1-204ENST00000440118 FAAP20Q6NZ36 180 aa14.91□□□□□ -0.02
SHROOM1-204ENST00000440118 ZNF114Q8NC26 417 aa14.91□□□□□ -0.02
SHROOM1-204ENST00000440118 SMIM4Q8WVI0 70 aa14.91□□□□□ -0.02
SHROOM1-204ENST00000440118 RABL2AQ9UBK7 228 aaPredicted RBP14.91□□□□□ -0.02
SHROOM1-204ENST00000440118 RABL2BQ9UNT1 228 aa14.91□□□□□ -0.02
SHROOM1-204ENST00000440118 TEX13DA0A0J9YY54 714 aaPredicted RBP14.9□□□□□ -0.02
SHROOM1-204ENST00000440118 GNG7O60262 68 aa14.9□□□□□ -0.02
SHROOM1-204ENST00000440118 MT-CO2P00403 227 aa14.9□□□□□ -0.02
SHROOM1-204ENST00000440118 IGKV1-5P01602 117 aa14.9□□□□□ -0.02
SHROOM1-204ENST00000440118 CTSDP07339 412 aaPredicted RBP14.9□□□□□ -0.02
SHROOM1-204ENST00000440118 C8orf88P0DMB2 117 aa14.9□□□□□ -0.02
SHROOM1-204ENST00000440118 ZFAND6Q6FIF0 208 aa14.9□□□□□ -0.02
SHROOM1-204ENST00000440118 FAM110AQ9BQ89 295 aa14.9□□□□□ -0.02
SHROOM1-204ENST00000440118 WDR12Q9GZL7 423 aaKnown RBP14.9□□□□□ -0.02
SHROOM1-204ENST00000440118 C5orf66Q9H5L9 145 aa14.9□□□□□ -0.02
SHROOM1-204ENST00000440118 DNAH7Q8WXX0 4024 aa14.9□□□□□ -0.02
SHROOM1-204ENST00000440118 RBMY1BA6NDE4 496 aaKnown RBP14.89□□□□□ -0.03
SHROOM1-204ENST00000440118 RBMY1EA6NEQ0 496 aaKnown RBP14.89□□□□□ -0.03
SHROOM1-204ENST00000440118 B3GALNT1O75752 331 aa14.89□□□□□ -0.03
SHROOM1-204ENST00000440118 RBMY1DP0C7P1 496 aaKnown RBP14.89□□□□□ -0.03
SHROOM1-204ENST00000440118 AKAIN1P0CW23 69 aa14.89□□□□□ -0.03
SHROOM1-204ENST00000440118 SPAG8Q99932 426 aaPredicted RBP14.89□□□□□ -0.03
SHROOM1-204ENST00000440118 ST8SIA3O43173 380 aa14.88□□□□□ -0.03
SHROOM1-204ENST00000440118 IGHV3-48P01763 117 aa14.88□□□□□ -0.03
SHROOM1-204ENST00000440118 S100A5P33763 92 aa14.88□□□□□ -0.03
SHROOM1-204ENST00000440118 ADMP35318 185 aa14.88□□□□□ -0.03
SHROOM1-204ENST00000440118 SUB1P53999 127 aaKnown RBP eCLIP14.88□□□□□ -0.03
SHROOM1-204ENST00000440118 ZNF846Q147U1 533 aa14.88□□□□□ -0.03
SHROOM1-204ENST00000440118 DYNC2LI1Q8TCX1 351 aa14.88□□□□□ -0.03
SHROOM1-204ENST00000440118 TXN2Q99757 166 aa14.88□□□□□ -0.03
SHROOM1-204ENST00000440118 PRRT1Q99946 306 aa14.88□□□□□ -0.03
SHROOM1-204ENST00000440118 HIPK2Q9H2X6 1198 aa14.88□□□□□ -0.03
SHROOM1-204ENST00000440118 EDA2RQ9HAV5 297 aa14.88□□□□□ -0.03
SHROOM1-204ENST00000440118 C15orf62A8K5M9 175 aa14.87□□□□□ -0.03
SHROOM1-204ENST00000440118 F8W735 103 aaPredicted RBP14.87□□□□□ -0.03
SHROOM1-204ENST00000440118 I3L2K1 104 aa14.87□□□□□ -0.03
SHROOM1-204ENST00000440118 OR5AC1P0C628 307 aa14.87□□□□□ -0.03
SHROOM1-204ENST00000440118 UCP1P25874 307 aa14.87□□□□□ -0.03
SHROOM1-204ENST00000440118 LINC00322Q6ZN03 302 aaPredicted RBP14.87□□□□□ -0.03
SHROOM1-204ENST00000440118 OR4C16Q8NGL9 310 aa14.87□□□□□ -0.03
SHROOM1-204ENST00000440118 GGTLC1Q9BX51 225 aa14.87□□□□□ -0.03
SHROOM1-204ENST00000440118 LOC102724200A0A096LPH7 203 aaPredicted RBP14.86□□□□□ -0.03
SHROOM1-204ENST00000440118 K7EMT4 169 aa14.86□□□□□ -0.03
SHROOM1-204ENST00000440118 CORTO00230 105 aa14.86□□□□□ -0.03
SHROOM1-204ENST00000440118 CTSGP08311 255 aa14.86□□□□□ -0.03
SHROOM1-204ENST00000440118 ETV6P41212 452 aa14.86□□□□□ -0.03
SHROOM1-204ENST00000440118 NPBWR1P48145 328 aa14.86□□□□□ -0.03
SHROOM1-204ENST00000440118 SURF2Q15527 256 aaPredicted RBP14.86□□□□□ -0.03
SHROOM1-204ENST00000440118 DUSP18Q8NEJ0 188 aa14.86□□□□□ -0.03
SHROOM1-204ENST00000440118 NAA60Q9H7X0 242 aa14.86□□□□□ -0.03
SHROOM1-204ENST00000440118 MCUBQ9NWR8 336 aa14.86□□□□□ -0.03
SHROOM1-204ENST00000440118 UBQLN2Q9UHD9 624 aa14.86□□□□□ -0.03
SHROOM1-204ENST00000440118 A0A0B4J293 547 aa14.85□□□□□ -0.03
SHROOM1-204ENST00000440118 OR4C46A6NHA9 309 aa14.85□□□□□ -0.03
SHROOM1-204ENST00000440118 TSPAN4O14817 238 aa14.85□□□□□ -0.03
SHROOM1-204ENST00000440118 CTDSPLO15194 276 aa14.85□□□□□ -0.03
SHROOM1-204ENST00000440118 SCGB2A1O75556 95 aa14.85□□□□□ -0.03
SHROOM1-204ENST00000440118 MCFD2Q8NI22 146 aa14.85□□□□□ -0.03
SHROOM1-204ENST00000440118 GINS3Q9BRX5 216 aa14.85□□□□□ -0.03
SHROOM1-204ENST00000440118 TMEM222Q9H0R3 208 aa14.85□□□□□ -0.03
SHROOM1-204ENST00000440118 IGHV3-49A0A0A0MS15 119 aa14.84□□□□□ -0.03
SHROOM1-204ENST00000440118 P0C879 139 aa14.84□□□□□ -0.03
SHROOM1-204ENST00000440118 FCGR2BP31994 310 aaPredicted RBP14.84□□□□□ -0.03
SHROOM1-204ENST00000440118 BMI1P35226 326 aa14.84□□□□□ -0.03
SHROOM1-204ENST00000440118 DHODHQ02127 395 aa14.84□□□□□ -0.03
SHROOM1-204ENST00000440118 FAM219AQ8IW50 185 aa14.84□□□□□ -0.03
SHROOM1-204ENST00000440118 TMEM116Q8NCL8 245 aa14.84□□□□□ -0.03
SHROOM1-204ENST00000440118 OR51S1Q8NGJ8 323 aa14.84□□□□□ -0.03
SHROOM1-204ENST00000440118 RBPMSQ93062 196 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-204ENST00000440118 NXF2Q9GZY0 626 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-204ENST00000440118 SCP2D1Q9UJQ7 156 aa14.84□□□□□ -0.03
SHROOM1-204ENST00000440118 IGHV7-4-1A0A0J9YVY3 117 aa14.83□□□□□ -0.04
SHROOM1-204ENST00000440118 OPRK1P41145 380 aa14.83□□□□□ -0.04
SHROOM1-204ENST00000440118 TMEM268Q5VZI3 342 aa14.83□□□□□ -0.04
SHROOM1-204ENST00000440118 SCGB3A2Q96PL1 93 aa14.83□□□□□ -0.04
SHROOM1-204ENST00000440118 RTBDNQ9BSG5 229 aaPredicted RBP14.83□□□□□ -0.04
SHROOM1-204ENST00000440118 RHPN1-AS1Q9BWJ2 59 aa14.83□□□□□ -0.04
SHROOM1-204ENST00000440118 TRAV14DV4A0A0A6YYC5 116 aa14.82□□□□□ -0.04
SHROOM1-204ENST00000440118 A0A0G2JRQ6 117 aa14.82□□□□□ -0.04
SHROOM1-204ENST00000440118 FABP12A6NFH5 140 aa14.82□□□□□ -0.04
SHROOM1-204ENST00000440118 APOC4P55056 127 aa14.82□□□□□ -0.04
SHROOM1-204ENST00000440118 IL17DQ8TAD2 202 aa14.82□□□□□ -0.04
SHROOM1-204ENST00000440118 SLIRPQ9GZT3 109 aaKnown RBP14.82□□□□□ -0.04
SHROOM1-204ENST00000440118 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.82□□□□□ -0.04
SHROOM1-204ENST00000440118 CACNG5Q9UF02 275 aa14.82□□□□□ -0.04
SHROOM1-204ENST00000440118 SMPXQ9UHP9 88 aa14.82□□□□□ -0.04
SHROOM1-204ENST00000440118 IGKV3-7A0A075B6H7 116 aa14.81□□□□□ -0.04
SHROOM1-204ENST00000440118 IGHV3OR16-13A0A075B7E8 117 aa14.81□□□□□ -0.04
SHROOM1-204ENST00000440118 IGHV3-74A0A0B4J1X5 117 aa14.81□□□□□ -0.04
SHROOM1-204ENST00000440118 ANKRD20A5PA0PJZ0 165 aa14.81□□□□□ -0.04
SHROOM1-204ENST00000440118 CRYM-AS1A6NIL9 109 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms