RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 BAGE3Q86Y29 109 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 BAGE2Q86Y30 109 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 SGK494Q96LW2 274 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 TXNDC17Q9BRA2 123 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 COMMD5Q9GZQ3 224 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 APC2O95996 2303 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 ZGRF1Q86YA3 2104 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 IGHV3-72A0A0B4J1Y9 119 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 TM4SF5O14894 197 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 TNFSF4P23510 183 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 ADTRPQ96IZ2 230 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 TBX15Q96SF7 602 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 NAGKQ9UJ70 344 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 POLR3KQ9Y2Y1 108 aaPredicted RBP11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 V9GYV3 84 aa11.02□□□□□ -0.65
HERPUD1-204ENST00000439977 CEP295Q9C0D2 2601 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 hADV38S2A0JD32 116 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 PYYP10082 97 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 RNASE2P10153 161 aaKnown RBP11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 LGALS4P56470 323 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 YPEL3P61236 119 aaPredicted RBP11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 RPEL1Q2QD12 228 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 MRPL54Q6P161 138 aaKnown RBP11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 Q6ZWC4 215 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 TGIF2LXQ8IUE1 241 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 NDUFAF3Q9BU61 184 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 SSBP3Q9BWW4 388 aaPredicted RBP11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 DYSFO75923 2080 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 KLK10O43240 276 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 CDKN1AP38936 164 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 LYPD2Q6UXB3 125 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 TOMM20LQ6UXN7 152 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 C19orf35Q6ZS72 473 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 RBMXL3Q8N7X1 1067 aaKnown RBP11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 BTF3L4Q96K17 158 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 HSPB9Q9BQS6 159 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 TECRQ9NZ01 308 aaKnown RBP11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 NAT8BQ9UHF3 227 aa11.01□□□□□ -0.65
HERPUD1-204ENST00000439977 TRAV34A0A0B4J273 112 aa11□□□□□ -0.65
HERPUD1-204ENST00000439977 CEACAM4O75871 244 aa11□□□□□ -0.65
HERPUD1-204ENST00000439977 AREGP15514 252 aa11□□□□□ -0.65
HERPUD1-204ENST00000439977 PAX1P15863 534 aa11□□□□□ -0.65
HERPUD1-204ENST00000439977 RITA1Q96K30 269 aa11□□□□□ -0.65
HERPUD1-204ENST00000439977 NOL4LQ96MY1 436 aaPredicted RBP11□□□□□ -0.65
HERPUD1-204ENST00000439977 IGHV3-21A0A0B4J1V1 117 aa11□□□□□ -0.65
HERPUD1-204ENST00000439977 ITGB1BP1O14713 200 aa11□□□□□ -0.65
HERPUD1-204ENST00000439977 TMEM200BQ69YZ2 307 aa11□□□□□ -0.65
HERPUD1-204ENST00000439977 OR10X1Q8NGY0 326 aa11□□□□□ -0.65
HERPUD1-204ENST00000439977 FAM168AQ92567 244 aa11□□□□□ -0.65
HERPUD1-204ENST00000439977 CORO2AQ92828 525 aa11□□□□□ -0.65
HERPUD1-204ENST00000439977 RAB9BQ9NP90 201 aa11□□□□□ -0.65
HERPUD1-204ENST00000439977 RAI1Q7Z5J4 1906 aaPredicted RBP11□□□□□ -0.65
HERPUD1-204ENST00000439977 Q6ZS92 163 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 NPIPB3Q92617 1050 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 C11orf52Q96A22 123 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 SAMD10Q9BYL1 202 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 TPSG1Q9NRR2 321 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 DSCAML1Q8TD84 2053 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 ASH1LQ9NR48 2969 aaKnown RBP10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 NBASA2RRP1 2371 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 DPRXA6NFQ7 191 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 RPL8P62917 257 aaKnown RBP10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 BSPH1Q075Z2 132 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 POU2AF1Q16633 256 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 TIGITQ495A1 244 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 VN1R17PQ8TDU5 208 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 SLC25A33Q9BSK2 321 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 TMEM167BQ9NRX6 74 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 MRPL36Q9P0J6 103 aaKnown RBP10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 ZNF257Q9Y2Q1 563 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 DCHS2Q6V1P9 2916 aa10.99□□□□□ -0.65
HERPUD1-204ENST00000439977 C9JCJ5 164 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 UBE2L3P68036 154 aaKnown RBP10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 WT1-ASQ06250 92 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 CD69Q07108 199 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 ADIPOQQ15848 244 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 RUSC1-AS1Q66K80 236 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 OR5AU1Q8NGC0 362 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 FLYWCH2Q96CP2 140 aaKnown RBP10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 FNDC4Q9H6D8 234 aaPredicted RBP10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 PAM16Q9Y3D7 125 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 RNF114Q9Y508 228 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 SPTA1P02549 2419 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 H0YJW9 148 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 ENSAO43768 121 aaKnown RBP10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 PRB4P10163 310 aaPredicted RBP10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 PRR27Q6MZM9 219 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 TMEM108Q6UXF1 575 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 ZNF714Q96N38 554 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 SAP30LQ9HAJ7 183 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 LINC00312Q9Y6C7 94 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 A0A0G2JNJ9 132 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 APOA2P02652 100 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 C8orf88P0DMB2 117 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 TAS2R60P59551 318 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 C2orf83Q53S99 150 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 HCP5Q6MZN7 132 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 ZNF705AQ6ZN79 300 aaPredicted RBP10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 OR5B3Q8NH48 314 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms