RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 UXS1Q8NBZ7 420 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 DUSP18Q8NEJ0 188 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 PINX1Q96BK5 328 aaKnown RBP7.95□□□□□ -1.14
MCF2L-216ENST00000439475 ZC4H2Q9NQZ6 224 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 TMEM56-RWDD3S4R434 201 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 V9GYH0 126 aa7.95□□□□□ -1.14
MCF2L-216ENST00000439475 NAP1L6A6NFF2 107 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 CENPXA8MT69 81 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 A8MWP6 167 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 K7EIM0 57 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 NDUFA4O00483 81 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 GNG7O60262 68 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 MT-CO2P00403 227 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 FCGR2BP31994 310 aaPredicted RBP7.94□□□□□ -1.14
MCF2L-216ENST00000439475 MFAP2P55001 183 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 TMEM187Q14656 261 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 ZNF79Q15937 498 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 GUCA2BQ16661 112 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 ANKRD55Q3KP44 614 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 CD300EQ496F6 205 aaPredicted RBP7.94□□□□□ -1.14
MCF2L-216ENST00000439475 TMEM128Q5BJH2 165 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 SPINK9Q5DT21 86 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 LAMTOR1Q6IAA8 161 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 RBPMS2Q6ZRY4 209 aaKnown RBP7.94□□□□□ -1.14
MCF2L-216ENST00000439475 TMED4Q7Z7H5 227 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 TRIM63Q969Q1 353 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 GPR146Q96CH1 333 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 ZNF436Q9C0F3 470 aaPredicted RBP7.94□□□□□ -1.14
MCF2L-216ENST00000439475 HIPK2Q9H2X6 1198 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 TUBA4BQ9H853 241 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 ZMAT4Q9H898 229 aa7.94□□□□□ -1.14
MCF2L-216ENST00000439475 TRAV25A0A0B4J276 109 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 A0A0B4J2A0 478 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 IGHV3-35A0A0C4DH35 117 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 RPS10-NUDT3A0A1W2PQS6 291 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 CEBPZOSA8MTT3 80 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 A8MZ25 164 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 I3L2K1 104 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 K7EMT4 169 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 SULT1A3P0DMM9 295 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 SULT1A4P0DMN0 295 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 HTR2BP41595 481 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 CCR6P51684 374 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 Q6ZRM9 215 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 Q8N1Y9 231 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 LHFPL5Q8TAF8 219 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 TMEM230Q96A57 120 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 ASCL2Q99929 193 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 C20orf24Q9BUV8 137 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 SRRQ9GZT4 340 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 HEYLQ9NQ87 328 aaPredicted RBP7.93□□□□□ -1.14
MCF2L-216ENST00000439475 CACNG5Q9UF02 275 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 SHPKQ9UHJ6 478 aa7.93□□□□□ -1.14
MCF2L-216ENST00000439475 A0A0G2JRQ6 117 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 DUXBA0A1W2PPF3 345 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 TMEM213A2RRL7 107 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 YIF1AO95070 293 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 FRMD6-AS1P0C7T7 363 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 C8orf88P0DMB2 117 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 IGHV4-30-4P0DP06 118 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 RBMS2Q15434 407 aaKnown RBP7.92□□□□□ -1.14
MCF2L-216ENST00000439475 CNPY1Q3B7I2 92 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 TM4SF20Q53R12 229 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 ADAMTSL5Q6ZMM2 481 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 SLC16A13Q7RTY0 426 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 CENPSQ8N2Z9 138 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 TMEM190Q8WZ59 177 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 NEURL2Q9BR09 285 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 C7orf50Q9BRJ6 194 aaKnown RBP7.92□□□□□ -1.14
MCF2L-216ENST00000439475 DAZ1Q9NQZ3 744 aaKnown RBP7.92□□□□□ -1.14
MCF2L-216ENST00000439475 U3KQK5 164 aa7.92□□□□□ -1.14
MCF2L-216ENST00000439475 TRAV30A0A087WSZ9 112 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 A0A1B0GU03 582 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 IZUMO1RA6ND01 250 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 C15orf62A8K5M9 175 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 ZNF785A8K8V0 405 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 CTSGP08311 255 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 RNASE2P10153 161 aaKnown RBP7.91□□□□□ -1.14
MCF2L-216ENST00000439475 VAMP1P23763 118 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 BMI1P35226 326 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 OPRK1P41145 380 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 CD81P60033 236 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 SMCO1Q147U7 214 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 AARDQ4LEZ3 155 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 ETFRF1Q6IPR1 90 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 C11orf87Q6NUJ2 197 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 UNQ9165/PRO28630Q6UXU0 137 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 GINS3Q9BRX5 216 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 CHRDL1Q9BU40 450 aa7.91□□□□□ -1.14
MCF2L-216ENST00000439475 MEGF8Q7Z7M0 2845 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 TRAV14DV4A0A0A6YYC5 116 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 F8W735 103 aaPredicted RBP7.9□□□□□ -1.14
MCF2L-216ENST00000439475 SFT2D2O95562 160 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 TMEM50AO95807 157 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 ATP5IP56385 69 aaPredicted RBP7.9□□□□□ -1.14
MCF2L-216ENST00000439475 UBE2MP61081 183 aaKnown RBP7.9□□□□□ -1.14
MCF2L-216ENST00000439475 SUPT4H1P63272 117 aaKnown RBP7.9□□□□□ -1.14
MCF2L-216ENST00000439475 BAK1Q16611 211 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 C2orf83Q53S99 150 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 PVRIGQ6DKI7 326 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms