RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 FRAS1Q86XX4 4008 aa1.39□□□□□ -2.19
VPS41-207ENST00000439468 DSCAMO60469 2012 aa1.39□□□□□ -2.19
VPS41-207ENST00000439468 MYH4Q9Y623 1939 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 IGHV3-73A0A0B4J1V6 119 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 F5H768 121 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 OVOL1O14753 267 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 KRT7P08729 469 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 OCMP0CE72 109 aaPredicted RBP1.38□□□□□ -2.19
VPS41-207ENST00000439468 CCL3P10147 92 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 CD36P16671 472 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 CRHBPP24387 322 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 MIPP30301 263 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 OPRM1P35372 400 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 CD200P41217 278 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 ZNF140P52738 457 aaPredicted RBP1.38□□□□□ -2.19
VPS41-207ENST00000439468 DAD1P61803 113 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 SDHAF4Q5VUM1 108 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 DRAM2Q6UX65 266 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 CCDC121Q6ZUS5 278 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 CD302Q8IX05 232 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 OR51H1Q8NH63 302 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 OR10D3Q8NH80 312 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 RNASE11Q8TAA1 199 aaKnown RBP1.38□□□□□ -2.19
VPS41-207ENST00000439468 CYGBQ8WWM9 190 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 FGF13Q92913 245 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 RNASE6Q93091 150 aaKnown RBP1.38□□□□□ -2.19
VPS41-207ENST00000439468 OR52B2Q96RD2 323 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 TIPINQ9BVW5 301 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 CDCA4Q9BXL8 241 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 UBQLN4Q9NRR5 601 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 Q9Y3F1 56 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 SONP18583 2426 aaKnown RBP1.38□□□□□ -2.19
VPS41-207ENST00000439468 RAD50Q92878 1312 aa1.38□□□□□ -2.19
VPS41-207ENST00000439468 DIDO1Q9BTC0 2240 aaKnown RBP1.38□□□□□ -2.19
VPS41-207ENST00000439468 COL7A1Q02388 2944 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 HERC1Q15751 4861 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 HECTD4Q9Y4D8 3996 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 KIAA1109Q2LD37 5005 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 C1orf232A0A0U1RR37 186 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 M0R381 172 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 COPEO14579 308 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 BIRC5O15392 142 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 HPGDSO60760 199 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 CRYBA1P05813 215 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 LINC00614P0C842 121 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 UGT2B7P16662 529 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 IFNGR2P38484 337 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 CLEC12BQ2HXU8 276 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 SAPCD1Q5SSQ6 148 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 BAP18Q8IXM2 172 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 RPS4Y2Q8TD47 263 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 Q8WTZ3 238 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 OR7D2Q96RA2 312 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 TXNDC17Q9BRA2 123 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 TTTY12Q9BZ98 90 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 OR51B6Q9H340 312 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 TMEM106BQ9NUM4 274 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 PLXNA2O75051 1894 aa1.37□□□□□ -2.19
VPS41-207ENST00000439468 HRNRQ86YZ3 2850 aaPredicted RBP1.37□□□□□ -2.19
VPS41-207ENST00000439468 MYH7P12883 1935 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 DENND4CQ5VZ89 1909 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 MUC21A0A0G2JKD1 596 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 MUC21A0A140T8X8 626 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 A0A1W2PQL4 384 aaPredicted RBP1.36□□□□□ -2.19
VPS41-207ENST00000439468 C11orf86A6NJI1 115 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 OR11H12B2RN74 326 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 ITGB1BP1O14713 200 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 IL6P05231 212 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 CD7P09564 240 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 NPPCP23582 126 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 RPL14P50914 215 aaKnown RBP1.36□□□□□ -2.19
VPS41-207ENST00000439468 PCOTHQ58A44 107 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 DNM1P34Q6PK57 102 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 PLEKHG7Q6ZR37 379 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 FAM19A5Q7Z5A7 132 aaPredicted RBP1.36□□□□□ -2.19
VPS41-207ENST00000439468 OR11H2Q8NH07 326 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 FNDC9Q8TBE3 224 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 ASB13Q8WXK3 278 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 PECRQ9BY49 303 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 DERL2Q9GZP9 239 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 EIF5A2Q9GZV4 153 aaKnown RBP1.36□□□□□ -2.19
VPS41-207ENST00000439468 SLC22A4Q9H015 551 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 SLC2A9Q9NRM0 540 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 TXNL4BQ9NX01 149 aaKnown RBP1.36□□□□□ -2.19
VPS41-207ENST00000439468 CRCT1Q9UGL9 99 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 HHLA2Q9UM44 414 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 SAMHD1Q9Y3Z3 626 aaKnown RBP1.36□□□□□ -2.19
VPS41-207ENST00000439468 ABCA13Q86UQ4 5058 aa1.36□□□□□ -2.19
VPS41-207ENST00000439468 CACNA1CQ13936 2221 aa1.35□□□□□ -2.19
VPS41-207ENST00000439468 A0A0G2JQZ4 141 aa1.35□□□□□ -2.19
VPS41-207ENST00000439468 DHRS12A0PJE2 317 aa1.35□□□□□ -2.19
VPS41-207ENST00000439468 KNCNA6PVL3 124 aa1.35□□□□□ -2.19
VPS41-207ENST00000439468 GOLGA8KD6RF30 607 aa1.35□□□□□ -2.19
VPS41-207ENST00000439468 GOLGA8MH3BSY2 632 aa1.35□□□□□ -2.19
VPS41-207ENST00000439468 GSTZ1O43708 216 aaPredicted RBP1.35□□□□□ -2.19
VPS41-207ENST00000439468 PSMG1O95456 288 aa1.35□□□□□ -2.19
VPS41-207ENST00000439468 IGKV1-16P04430 117 aa1.35□□□□□ -2.19
VPS41-207ENST00000439468 IFI30P13284 250 aa1.35□□□□□ -2.19
VPS41-207ENST00000439468 ALOX5APP20292 161 aa1.35□□□□□ -2.19
VPS41-207ENST00000439468 ATP6V0CP27449 155 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms