RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 ZZEF1O43149 2961 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 TRAV5A0A0B4J249 113 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 KLF3P57682 345 aaPredicted RBP11.11□□□□□ -0.63
PCNX3-202ENST00000439247 WDR73Q6P4I2 378 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 WDR82Q6UXN9 313 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 SPACA3Q8IXA5 215 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 TCTEX1D1Q8N7M0 179 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 SGK494Q96LW2 274 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 NABP2Q9BQ15 211 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 FAM173AQ9BQD7 235 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 CHODLQ9H9P2 273 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 ZNF355PQ9NSJ1 428 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 APC2O95996 2303 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 AREGP15514 252 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 NPY1RP25929 384 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 TMPRSS3P57727 454 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 RNASEKQ6P5S7 137 aaKnown RBP11.11□□□□□ -0.63
PCNX3-202ENST00000439247 OR4F17Q8NGA8 305 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 OR52E5Q8NH55 327 aa11.11□□□□□ -0.63
PCNX3-202ENST00000439247 IGHV3OR15-7A0A075B7D8 119 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 FABP6P51161 128 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 ERVK-16P61578 105 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 FOXC1Q12948 553 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 ZNF738Q8NE65 137 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 SLC24A4Q8NFF2 622 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 MCRIP2Q9BUT9 160 aaKnown RBP11.1□□□□□ -0.63
PCNX3-202ENST00000439247 BET1LQ9NYM9 111 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 IL19Q9UHD0 177 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 CADP27708 2225 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 M0R2Z0 102 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 MT-CO2P00403 227 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 MT-ND6P03923 174 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 CAMPP49913 170 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 PRR20EP86478 221 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 PRR20CP86479 221 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 PRR20DP86480 221 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 PRR20BP86481 221 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 PRR20AP86496 221 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 MORN2Q502X0 79 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 FBLN7Q53RD9 439 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 PRR27Q6MZM9 219 aa11.1□□□□□ -0.63
PCNX3-202ENST00000439247 HEATR1Q9H583 2144 aaKnown RBP11.09□□□□□ -0.63
PCNX3-202ENST00000439247 IGHV2-26A0A0B4J1V2 119 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 IGHV2OR16-5A0A0B4J2B6 119 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 FAM181BA6NEQ2 426 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 SPINT2O43291 252 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 HSBP1O75506 76 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 MFAP2P55001 183 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 PLEKHA3Q9HB20 300 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 OSTCQ9NRP0 149 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 LOC102724200A0A096LPH7 203 aaPredicted RBP11.09□□□□□ -0.63
PCNX3-202ENST00000439247 SMIM27A0A1W2PRY6 76 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 TOMM40O96008 361 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 LINC00173Q6ZV60 143 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 LHFPL4Q7Z7J7 247 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 KLHDC1Q8N7A1 406 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 OR4C5Q8NGB2 326 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 S1PR3Q99500 378 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 LY96Q9Y6Y9 160 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 BSNQ9UPA5 3926 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 CORTO00230 105 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 HLA-DQA1P01909 254 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 S100A7P31151 101 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 OR9G1Q8NH87 305 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 B4GALT7Q9UBV7 327 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 DUSP13Q9UII6 198 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 SELENOKQ9Y6D0 94 aa11.09□□□□□ -0.63
PCNX3-202ENST00000439247 PIEZO1Q92508 2521 aa11.08□□□□□ -0.64
PCNX3-202ENST00000439247 ARG2P78540 354 aa11.08□□□□□ -0.64
PCNX3-202ENST00000439247 VAMP3Q15836 100 aa11.08□□□□□ -0.64
PCNX3-202ENST00000439247 AARDQ4LEZ3 155 aa11.08□□□□□ -0.64
PCNX3-202ENST00000439247 WDR31Q8NA23 367 aa11.08□□□□□ -0.64
PCNX3-202ENST00000439247 ZNRF1Q8ND25 227 aa11.08□□□□□ -0.64
PCNX3-202ENST00000439247 GAL3ST2Q9H3Q3 398 aa11.08□□□□□ -0.64
PCNX3-202ENST00000439247 ZNF331Q9NQX6 463 aaPredicted RBP11.08□□□□□ -0.64
PCNX3-202ENST00000439247 ANKRD11Q6UB99 2663 aaPredicted RBP11.08□□□□□ -0.64
PCNX3-202ENST00000439247 IGLC7A0M8Q6 106 aa11.08□□□□□ -0.64
PCNX3-202ENST00000439247 IQCF6A8MYZ5 107 aa11.08□□□□□ -0.64
PCNX3-202ENST00000439247 IGHV3-48P01763 117 aa11.08□□□□□ -0.64
PCNX3-202ENST00000439247 MPV17L2Q567V2 206 aa11.08□□□□□ -0.64
PCNX3-202ENST00000439247 ABHD17BQ5VST6 288 aa11.08□□□□□ -0.64
PCNX3-202ENST00000439247 OR4A47Q6IF82 309 aa11.08□□□□□ -0.64
PCNX3-202ENST00000439247 IGF2BP2-AS1Q96M15 143 aa11.08□□□□□ -0.64
PCNX3-202ENST00000439247 ISLRO14498 428 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 NANOS1Q8WY41 292 aaKnown RBP11.07□□□□□ -0.64
PCNX3-202ENST00000439247 IFI27L2Q9H2X8 130 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 ZNRD1Q9P1U0 126 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 MRPS16Q9Y3D3 137 aaKnown RBP11.07□□□□□ -0.64
PCNX3-202ENST00000439247 DYSFO75923 2080 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 TRAV9-2A0A087WT02 112 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 hDV102S1A0JD36 115 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 VWC2LB2RUY7 222 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 MMP23AO75900 390 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 IGHV1-2P23083 117 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 SELENOVP59797 346 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 COTL1Q14019 142 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 SPRNQ5BIV9 151 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 C19orf35Q6ZS72 473 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 TNFRSF19Q9NS68 423 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms