RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 TRAV24A0A0B4J272 114 aa13.16□□□□□ -0.3
DHFR-201ENST00000439211 BHLHA15Q7RTS1 189 aaPredicted RBP13.16□□□□□ -0.3
DHFR-201ENST00000439211 TMEM45BQ96B21 275 aa13.16□□□□□ -0.3
DHFR-201ENST00000439211 HEYLQ9NQ87 328 aaPredicted RBP13.16□□□□□ -0.3
DHFR-201ENST00000439211 HSPB8Q9UJY1 196 aa13.16□□□□□ -0.3
DHFR-201ENST00000439211 IBA57Q5T440 356 aaKnown RBP13.16□□□□□ -0.3
DHFR-201ENST00000439211 Q6ZPA2 131 aa13.16□□□□□ -0.3
DHFR-201ENST00000439211 ZNF826PQ6ZT77 177 aa13.16□□□□□ -0.3
DHFR-201ENST00000439211 MOB1BQ7L9L4 216 aa13.16□□□□□ -0.3
DHFR-201ENST00000439211 DUSP13Q9UII6 198 aa13.16□□□□□ -0.3
DHFR-201ENST00000439211 TEX48A0A1B0GUV7 120 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 TMEM177Q53S58 311 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 CENPWQ5EE01 88 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 EBLN2Q6P2I7 272 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 NEUROG1Q92886 237 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 CACNA1HO95180 2353 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 PPIAL4EA0A075B759 164 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 GAGE12HA6NDE8 117 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 PPIAL4FP0DN26 164 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 FAM162BQ5T6X4 162 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 C1orf210Q8IVY1 113 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 NHLRC2Q8NBF2 726 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 POM121L2Q96KW2 1035 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 CXorf1O96002 111 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 SEC11AP67812 179 aa13.15□□□□□ -0.3
DHFR-201ENST00000439211 SSBP4Q9BWG4 385 aaPredicted RBP13.15□□□□□ -0.3
DHFR-201ENST00000439211 SH2D7A6NKC9 451 aaPredicted RBP13.14□□□□□ -0.31
DHFR-201ENST00000439211 TNRC6AQ8NDV7 1962 aaKnown RBP13.14□□□□□ -0.31
DHFR-201ENST00000439211 C9orf172C9J069 976 aa13.14□□□□□ -0.31
DHFR-201ENST00000439211 HLA-DRB1P01911 266 aa13.14□□□□□ -0.31
DHFR-201ENST00000439211 DRAM1Q8N682 238 aa13.14□□□□□ -0.31
DHFR-201ENST00000439211 TMEM105Q8N8V8 129 aa13.14□□□□□ -0.31
DHFR-201ENST00000439211 OR1L1Q8NH94 360 aa13.14□□□□□ -0.31
DHFR-201ENST00000439211 SFXN3Q9BWM7 321 aa13.14□□□□□ -0.31
DHFR-201ENST00000439211 PSG11Q9UQ72 335 aa13.14□□□□□ -0.31
DHFR-201ENST00000439211 MED13Q9UHV7 2174 aa13.14□□□□□ -0.31
DHFR-201ENST00000439211 ATG2AQ2TAZ0 1938 aa13.14□□□□□ -0.31
DHFR-201ENST00000439211 HBZP02008 142 aa13.14□□□□□ -0.31
DHFR-201ENST00000439211 CRYBB3P26998 211 aa13.14□□□□□ -0.31
DHFR-201ENST00000439211 OR5A1Q8NGJ0 315 aa13.14□□□□□ -0.31
DHFR-201ENST00000439211 EAF1Q96JC9 268 aaPredicted RBP13.14□□□□□ -0.31
DHFR-201ENST00000439211 ZNF503-AS2A6NEH8 195 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 SLC25A17O43808 307 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 RNPS1Q15287 305 aaKnown RBP13.13□□□□□ -0.31
DHFR-201ENST00000439211 MTURNQ8N3F0 131 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 C18orf32Q8TCD1 76 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 BLNKQ8WV28 456 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.13□□□□□ -0.31
DHFR-201ENST00000439211 TRBV20OR9-2A0A075B6H5 130 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 FTH1P19P0C7X4 201 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 ALKBH6Q3KRA9 238 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 VSTM2AQ8TAG5 236 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 LSM10Q969L4 123 aaKnown RBP13.13□□□□□ -0.31
DHFR-201ENST00000439211 SS18L2Q9UHA2 77 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 KLF13Q9Y2Y9 288 aaPredicted RBP13.13□□□□□ -0.31
DHFR-201ENST00000439211 TMEM265A0A087WTH1 108 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 ZG16O60844 167 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 TFF1P04155 84 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 TMEM116Q8NCL8 245 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 SPSB4Q96A44 273 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 TXNDC17Q9BRA2 123 aa13.13□□□□□ -0.31
DHFR-201ENST00000439211 MIC13Q5XKP0 118 aa13.12□□□□□ -0.31
DHFR-201ENST00000439211 SP5Q6BEB4 398 aaPredicted RBP13.12□□□□□ -0.31
DHFR-201ENST00000439211 TMEM136Q6ZRR5 245 aa13.12□□□□□ -0.31
DHFR-201ENST00000439211 ZNF257Q9Y2Q1 563 aa13.12□□□□□ -0.31
DHFR-201ENST00000439211 TRGV5A0A0B4J1U4 118 aa13.12□□□□□ -0.31
DHFR-201ENST00000439211 TMEM30CPA0ZSE6 113 aa13.12□□□□□ -0.31
DHFR-201ENST00000439211 K7EP34 96 aa13.12□□□□□ -0.31
DHFR-201ENST00000439211 CX3CL1P78423 397 aa13.12□□□□□ -0.31
DHFR-201ENST00000439211 SCGB1A1P11684 91 aa13.12□□□□□ -0.31
DHFR-201ENST00000439211 KIR3DS1Q14943 382 aa13.12□□□□□ -0.31
DHFR-201ENST00000439211 FGF23Q9GZV9 251 aaPredicted RBP13.12□□□□□ -0.31
DHFR-201ENST00000439211 TEX50A0A1B0GTY4 177 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 CD300EQ496F6 205 aaPredicted RBP13.11□□□□□ -0.31
DHFR-201ENST00000439211 PCSK4Q6UW60 755 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 F11RQ9Y624 299 aaKnown RBP13.11□□□□□ -0.31
DHFR-201ENST00000439211 NTN3O00634 580 aaPredicted RBP13.11□□□□□ -0.31
DHFR-201ENST00000439211 AGFG2O95081 481 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 CD1BP29016 333 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 ERVK-16P61578 105 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 OR4A16Q8NH70 328 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 C9orf118A6NHY6 69 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 H0YJW9 148 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 WNT9BO14905 357 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 OR5AL1P0C617 328 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 GCSHP23434 173 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 PSG5Q15238 335 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 SRSF7Q16629 238 aaKnown RBP eCLIP13.11□□□□□ -0.31
DHFR-201ENST00000439211 RTL8BQ17RB0 113 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 Q8IYB0 196 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 OR2Z1Q8NG97 314 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 SH2D2AQ9NP31 389 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 FRYLO94915 3013 aa13.11□□□□□ -0.31
DHFR-201ENST00000439211 TTC28Q96AY4 2481 aa13.1□□□□□ -0.31
DHFR-201ENST00000439211 ZDHHC16Q969W1 377 aa13.1□□□□□ -0.31
DHFR-201ENST00000439211 COMMD5Q9GZQ3 224 aa13.1□□□□□ -0.31
DHFR-201ENST00000439211 FCGR3BO75015 233 aa13.1□□□□□ -0.31
DHFR-201ENST00000439211 ZNF137PP52743 207 aa13.1□□□□□ -0.31
DHFR-201ENST00000439211 HOXA4Q00056 320 aaPredicted RBP13.1□□□□□ -0.31
DHFR-201ENST00000439211 ATP1A1-AS1Q5TC04 95 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms