RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 RTBDNQ9BSG5 229 aaPredicted RBP10.36□□□□□ -0.75
PRAME-209ENST00000439106 C5orf66Q9H5L9 145 aa10.36□□□□□ -0.75
PRAME-209ENST00000439106 EDA2RQ9HAV5 297 aa10.36□□□□□ -0.75
PRAME-209ENST00000439106 GAR1Q9NY12 217 aaKnown RBP10.36□□□□□ -0.75
PRAME-209ENST00000439106 PRR13Q9NZ81 148 aa10.36□□□□□ -0.75
PRAME-209ENST00000439106 MRPL27Q9P0M9 148 aaKnown RBP10.36□□□□□ -0.75
PRAME-209ENST00000439106 UBQLN2Q9UHD9 624 aa10.36□□□□□ -0.75
PRAME-209ENST00000439106 TENM2Q9NT68 2774 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 DISC1C4P0D8 188 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 NDUFA4O00483 81 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 IFNA17P01571 189 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 CTSGP08311 255 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 UCP1P25874 307 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 ETV6P41212 452 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 ELLP55199 621 aaPredicted RBP10.35□□□□□ -0.75
PRAME-209ENST00000439106 SSBP1Q04837 148 aaKnown RBP10.35□□□□□ -0.75
PRAME-209ENST00000439106 MEF2DQ14814 521 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 SPSB3Q6PJ21 355 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 Q6ZRM9 215 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 RBPMS2Q6ZRY4 209 aaKnown RBP10.35□□□□□ -0.75
PRAME-209ENST00000439106 SLC16A13Q7RTY0 426 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 OR51S1Q8NGJ8 323 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 OR1L6Q8NGR2 347 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 RNASE11Q8TAA1 199 aaKnown RBP10.35□□□□□ -0.75
PRAME-209ENST00000439106 BCL7BQ9BQE9 202 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 HIPK2Q9H2X6 1198 aa10.35□□□□□ -0.75
PRAME-209ENST00000439106 DAZ1Q9NQZ3 744 aaKnown RBP10.35□□□□□ -0.75
PRAME-209ENST00000439106 C14orf166Q9Y224 244 aaKnown RBP10.35□□□□□ -0.75
PRAME-209ENST00000439106 IGHV3OR16-13A0A075B7E8 117 aa10.34□□□□□ -0.75
PRAME-209ENST00000439106 IGHV3-74A0A0B4J1X5 117 aa10.34□□□□□ -0.75
PRAME-209ENST00000439106 TEX13DA0A0J9YY54 714 aaPredicted RBP10.34□□□□□ -0.75
PRAME-209ENST00000439106 CTDSPLO15194 276 aa10.34□□□□□ -0.75
PRAME-209ENST00000439106 TNFSF8P32971 234 aa10.34□□□□□ -0.75
PRAME-209ENST00000439106 HOXA1P49639 335 aaPredicted RBP10.34□□□□□ -0.75
PRAME-209ENST00000439106 ERHP84090 104 aaKnown RBP10.34□□□□□ -0.75
PRAME-209ENST00000439106 MCFD2Q8NI22 146 aa10.34□□□□□ -0.75
PRAME-209ENST00000439106 MARC2Q969Z3 335 aa10.34□□□□□ -0.75
PRAME-209ENST00000439106 RBM38Q9H0Z9 239 aaKnown RBP10.34□□□□□ -0.75
PRAME-209ENST00000439106 NAA60Q9H7X0 242 aa10.34□□□□□ -0.75
PRAME-209ENST00000439106 AGRNO00468 2067 aa10.34□□□□□ -0.75
PRAME-209ENST00000439106 ANKRD20A5PA0PJZ0 165 aa10.33□□□□□ -0.76
PRAME-209ENST00000439106 A6NHS1 94 aa10.33□□□□□ -0.76
PRAME-209ENST00000439106 YIF1AO95070 293 aa10.33□□□□□ -0.76
PRAME-209ENST00000439106 NXPH3O95157 252 aa10.33□□□□□ -0.76
PRAME-209ENST00000439106 RNASE2P10153 161 aaKnown RBP10.33□□□□□ -0.76
PRAME-209ENST00000439106 MFAP4P55083 255 aa10.33□□□□□ -0.76
PRAME-209ENST00000439106 GLYATL2Q8WU03 294 aa10.33□□□□□ -0.76
PRAME-209ENST00000439106 TMEM230Q96A57 120 aa10.33□□□□□ -0.76
PRAME-209ENST00000439106 RRNAD1Q96FB5 475 aaKnown RBP10.33□□□□□ -0.76
PRAME-209ENST00000439106 PDCD10Q9BUL8 212 aa10.33□□□□□ -0.76
PRAME-209ENST00000439106 TMEM222Q9H0R3 208 aa10.33□□□□□ -0.76
PRAME-209ENST00000439106 GPR132Q9UNW8 380 aa10.33□□□□□ -0.76
PRAME-209ENST00000439106 HYDINQ4G0P3 5121 aa10.32□□□□□ -0.76
PRAME-209ENST00000439106 CCDC160A6NGH7 325 aa10.32□□□□□ -0.76
PRAME-209ENST00000439106 CRYM-AS1A6NIL9 109 aa10.32□□□□□ -0.76
PRAME-209ENST00000439106 NUPL2O15504 423 aaKnown RBP10.32□□□□□ -0.76
PRAME-209ENST00000439106 GSTZ1O43708 216 aaPredicted RBP10.32□□□□□ -0.76
PRAME-209ENST00000439106 GNG7O60262 68 aa10.32□□□□□ -0.76
PRAME-209ENST00000439106 LYL1P12980 280 aa10.32□□□□□ -0.76
PRAME-209ENST00000439106 SNCAP37840 140 aa10.32□□□□□ -0.76
PRAME-209ENST00000439106 SELENOHQ8IZQ5 122 aaKnown RBP10.32□□□□□ -0.76
PRAME-209ENST00000439106 ATP6V0BQ99437 205 aa10.32□□□□□ -0.76
PRAME-209ENST00000439106 NXF2Q9GZY0 626 aaKnown RBP10.32□□□□□ -0.76
PRAME-209ENST00000439106 MRPL36Q9P0J6 103 aaKnown RBP10.32□□□□□ -0.76
PRAME-209ENST00000439106 LYSTQ99698 3801 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 IGKV3-7A0A075B6H7 116 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 TRAV25A0A0B4J276 109 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 FABP12A6NFH5 140 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 TSPAN4O14817 238 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 ATG12O94817 140 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 CDS2O95674 445 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 RELQ04864 619 aaPredicted RBP10.31□□□□□ -0.76
PRAME-209ENST00000439106 SURF2Q15527 256 aaPredicted RBP10.31□□□□□ -0.76
PRAME-209ENST00000439106 MLANAQ16655 118 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 ODF3L2Q3SX64 289 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 TMEM268Q5VZI3 342 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 RBPMSQ93062 196 aaKnown RBP10.31□□□□□ -0.76
PRAME-209ENST00000439106 GPR146Q96CH1 333 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 RNF2Q99496 336 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 SPAG8Q99932 426 aaPredicted RBP10.31□□□□□ -0.76
PRAME-209ENST00000439106 PRRT1Q99946 306 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 SOSTQ9BQB4 213 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 FNDC4Q9H6D8 234 aaPredicted RBP10.31□□□□□ -0.76
PRAME-209ENST00000439106 BATF3Q9NR55 127 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 MCUBQ9NWR8 336 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 CACNG5Q9UF02 275 aa10.31□□□□□ -0.76
PRAME-209ENST00000439106 PLECQ15149 4684 aaKnown RBP10.3□□□□□ -0.76
PRAME-209ENST00000439106 IGHV7-4-1A0A0J9YVY3 117 aa10.3□□□□□ -0.76
PRAME-209ENST00000439106 C15orf62A8K5M9 175 aa10.3□□□□□ -0.76
PRAME-209ENST00000439106 K7EMT4 169 aa10.3□□□□□ -0.76
PRAME-209ENST00000439106 FCGR2BP31994 310 aaPredicted RBP10.3□□□□□ -0.76
PRAME-209ENST00000439106 TFPI2P48307 235 aa10.3□□□□□ -0.76
PRAME-209ENST00000439106 ANKRD55Q3KP44 614 aa10.3□□□□□ -0.76
PRAME-209ENST00000439106 ENY2Q9NPA8 101 aa10.3□□□□□ -0.76
PRAME-209ENST00000439106 NDUFA13Q9P0J0 144 aa10.3□□□□□ -0.76
PRAME-209ENST00000439106 RSL24D1Q9UHA3 163 aaKnown RBP10.3□□□□□ -0.76
PRAME-209ENST00000439106 SMPXQ9UHP9 88 aa10.3□□□□□ -0.76
PRAME-209ENST00000439106 IGHV3-66A0A0C4DH42 116 aa10.29□□□□□ -0.76
PRAME-209ENST00000439106 INS-IGF2F8WCM5 200 aa10.29□□□□□ -0.76
PRAME-209ENST00000439106 CHEK1O14757 476 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms