RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 GNB1P62873 340 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 RPL31P62899 125 aaKnown RBP11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 LINC01551Q86U37 167 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 SLC24A4Q8NFF2 622 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 ANAPC16Q96DE5 110 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 GGTLC1Q9BX51 225 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 TMEM14BQ9NUH8 114 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 hADV38S2A0JD32 116 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 FCN3O75636 299 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 NDUFB4O95168 129 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 TYMSP04818 313 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 CT45A6P0DMU7 189 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 CT45A5P0DMU8 189 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 CT45A7P0DMV0 189 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 LYPD2Q6UXB3 125 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 NEIL1Q96FI4 390 aaPredicted RBP11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 PXMP4Q9Y6I8 212 aa11.3□□□□□ -0.6
PTCHD3-201ENST00000438700 TACC2O95359 2948 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 KIR2DL5BA0A0G2JN68 375 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 KIR2DL5BA0A0G2JPC4 375 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 SRRM4A7MD48 611 aaKnown RBP11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 LYNX1G3V0Z9 82 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 FRMD6-AS1P0C7T7 363 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 LYNX1P0DP58 116 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 NPY1RP25929 384 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 ADMP35318 185 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 HSPE1P61604 102 aaKnown RBP11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 ARSJQ5FYB0 599 aaPredicted RBP11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 SLC25A48Q6ZT89 311 aaKnown RBP11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 KIR2DL5AQ8N109 375 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 ENY2Q9NPA8 101 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 TP53TG3Q9ULZ0 132 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 FOXA2Q9Y261 457 aaPredicted RBP11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 CA2P00918 260 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 REG1BP48304 166 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 BATFQ16520 125 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 H1FXQ92522 213 aaKnown RBP11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 C1orf159Q96HA4 380 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 ADTRPQ96IZ2 230 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 SLC35D1Q9NTN3 355 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 OR51B2Q9Y5P1 312 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 LINC00312Q9Y6C7 94 aa11.29□□□□□ -0.6
PTCHD3-201ENST00000438700 TRBV20OR9-2A0A075B6H5 130 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 F2Z2F3 143 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 TNFRSF13BO14836 293 aaPredicted RBP11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 MPDU1O75352 247 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 ARL14EPLP0DKL9 152 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 SRP14P37108 136 aaKnown RBP11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 CDKN1AP38936 164 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 OPRK1P41145 380 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 Q6ZWC4 215 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 SGMS2Q8NHU3 365 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 CTSZQ9UBR2 303 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 PPOXP50336 477 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 LINC00310P59036 64 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 TOMM20LQ6UXN7 152 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 CORO2AQ92828 525 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 LINC00574Q9H8X3 128 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 PAM16Q9Y3D7 125 aa11.28□□□□□ -0.6
PTCHD3-201ENST00000438700 J3QR06 171 aa11.27□□□□□ -0.61
PTCHD3-201ENST00000438700 RTL8BQ17RB0 113 aa11.27□□□□□ -0.61
PTCHD3-201ENST00000438700 KCNIP4Q6PIL6 250 aa11.27□□□□□ -0.61
PTCHD3-201ENST00000438700 TMEM144Q7Z5S9 345 aa11.27□□□□□ -0.61
PTCHD3-201ENST00000438700 MRPL20Q9BYC9 149 aaKnown RBP11.27□□□□□ -0.61
PTCHD3-201ENST00000438700 NPVFQ9HCQ7 196 aa11.27□□□□□ -0.61
PTCHD3-201ENST00000438700 NDUFB3O43676 98 aa11.27□□□□□ -0.61
PTCHD3-201ENST00000438700 OR10J1P30954 320 aa11.27□□□□□ -0.61
PTCHD3-201ENST00000438700 TFPI2P48307 235 aa11.27□□□□□ -0.61
PTCHD3-201ENST00000438700 LRRC10Q5BKY1 277 aa11.27□□□□□ -0.61
PTCHD3-201ENST00000438700 MOB3BQ86TA1 216 aa11.27□□□□□ -0.61
PTCHD3-201ENST00000438700 ZNF714Q96N38 554 aa11.27□□□□□ -0.61
PTCHD3-201ENST00000438700 GAL3ST2Q9H3Q3 398 aa11.27□□□□□ -0.61
PTCHD3-201ENST00000438700 LSM4Q9Y4Z0 139 aaKnown RBP11.27□□□□□ -0.61
PTCHD3-201ENST00000438700 DLEU1O43261 78 aa11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 SAA1P0DJI8 122 aaPredicted RBP11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 CBLN1P23435 193 aa11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 TMEM200BQ69YZ2 307 aa11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 TEPPQ6URK8 271 aa11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 STPG3Q8N7X2 389 aa11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 PLEKHA3Q9HB20 300 aa11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 GOLT1BQ9Y3E0 138 aa11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 RNF114Q9Y508 228 aa11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 PLXNB1O43157 2135 aa11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 DCHS2Q6V1P9 2916 aa11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 C19orf84I3L1E1 186 aa11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 IL6RP08887 468 aaPredicted RBP11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 MEF2CQ06413 473 aaPredicted RBP11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 RAB1CQ92928 201 aa11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 SEPSECSQ9HD40 501 aaKnown RBP11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 PRNDQ9UKY0 176 aa11.26□□□□□ -0.61
PTCHD3-201ENST00000438700 NAV3Q8IVL0 2385 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 A0A1W2PPR1 153 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 LY6HO94772 140 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 IGFBP2P18065 325 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 DIAPH2-AS1Q14236 149 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 SPATA31B1PQ5VZV4 182 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 CMTM2Q8TAZ6 248 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 KAAG1Q9UBP8 84 aa11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 RALYQ9UKM9 306 aaKnown RBP11.25□□□□□ -0.61
PTCHD3-201ENST00000438700 ZFYVE26Q68DK2 2539 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms