RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 SMIM31A0A1B0GVY4 71 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 C15orf62A8K5M9 175 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 K7EMT4 169 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 GNG7O60262 68 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 SCGB2A1O75556 95 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 PGLYRP1O75594 196 aaPredicted RBP5.76□□□□□ -1.49
VPS50-204ENST00000438395 ATP6V1G2O95670 118 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 PMP2P02689 132 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 PLA2G1BP04054 148 aaKnown RBP5.76□□□□□ -1.49
VPS50-204ENST00000438395 CTSDP07339 412 aaPredicted RBP5.76□□□□□ -1.49
VPS50-204ENST00000438395 ATF4P18848 351 aaPredicted RBP5.76□□□□□ -1.49
VPS50-204ENST00000438395 GNRHRP30968 328 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 PRSS3P35030 304 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 TFPI2P48307 235 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 RFX2P48378 723 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 MFAP4P55083 255 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 TAS2R20P59543 309 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 ODF3L2Q3SX64 289 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 PHLDA2Q53GA4 152 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 LPCAT3Q6P1A2 487 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 CENPSQ8N2Z9 138 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 TMEM116Q8NCL8 245 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 OR1P1Q8NH06 330 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 SCARB1Q8WTV0 552 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 FCAMRQ8WWV6 532 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 SLC25A46Q96AG3 418 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 RNF183Q96D59 192 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 CHRDL1Q9BU40 450 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 RHPN1-AS1Q9BWJ2 59 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 MFFQ9GZY8 342 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 RNF167Q9H6Y7 350 aa5.76□□□□□ -1.49
VPS50-204ENST00000438395 C15orf61A6NNL5 157 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 MPTX1A8MV57 137 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 K7EIM0 57 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 DNASE2O00115 360 aaPredicted RBP5.75□□□□□ -1.49
VPS50-204ENST00000438395 IFNA4P05014 189 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 CD5P06127 495 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 HRH1P35367 487 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 SNCAP37840 140 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 RPL11P62913 178 aaKnown RBP5.75□□□□□ -1.49
VPS50-204ENST00000438395 KCTD21Q4G0X4 260 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 DHRS11Q6UWP2 260 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 SLC35G3Q8N808 338 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 GATAD1Q8WUU5 269 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 PINX1Q96BK5 328 aaKnown RBP5.75□□□□□ -1.49
VPS50-204ENST00000438395 FXYD6Q9H0Q3 95 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 TMEM231Q9H6L2 316 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 MAP6D1Q9H9H5 199 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 TMEM14BQ9NUH8 114 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 SMPXQ9UHP9 88 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 PLECQ15149 4684 aaKnown RBP5.75□□□□□ -1.49
VPS50-204ENST00000438395 ALMS1Q8TCU4 4167 aa5.75□□□□□ -1.49
VPS50-204ENST00000438395 IGHV3-49A0A0A0MS15 119 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 TRAV14DV4A0A0A6YYC5 116 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 IGHV7-4-1A0A0J9YVY3 117 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 ATG12O94817 140 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 MT-CO2P00403 227 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 PGAM2P15259 253 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 HLA-DMAP28067 261 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 RCVRNP35243 200 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 NPBWR1P48145 328 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 AKR1C2P52895 323 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 MFAP2P55001 183 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 ERHP84090 104 aaKnown RBP5.74□□□□□ -1.49
VPS50-204ENST00000438395 RBMS2Q15434 407 aaKnown RBP5.74□□□□□ -1.49
VPS50-204ENST00000438395 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 APRG1Q8IVJ8 170 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 CADM3Q8N126 398 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 GBGT1Q8N5D6 347 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 RNASE11Q8TAA1 199 aaKnown RBP5.74□□□□□ -1.49
VPS50-204ENST00000438395 PHLDA1Q8WV24 401 aaPredicted RBP5.74□□□□□ -1.49
VPS50-204ENST00000438395 NARS2Q96I59 477 aaKnown RBP5.74□□□□□ -1.49
VPS50-204ENST00000438395 RNF2Q99496 336 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 TXN2Q99757 166 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 RARRES2Q99969 163 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 PDCD10Q9BUL8 212 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 CSTL1Q9H114 145 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 ENY2Q9NPA8 101 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 FAM212BQ9NTI7 297 aaPredicted RBP5.74□□□□□ -1.49
VPS50-204ENST00000438395 FBXL17Q9UF56 701 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 LYSTQ99698 3801 aa5.74□□□□□ -1.49
VPS50-204ENST00000438395 IGHV3OR16-13A0A075B7E8 117 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 IGHV3-74A0A0B4J1X5 117 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 CHEK1O14757 476 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 ST8SIA3O43173 380 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 CA1P00915 261 aaPredicted RBP5.73□□□□□ -1.49
VPS50-204ENST00000438395 CTSGP08311 255 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 VAMP1P23763 118 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 FCGR2BP31994 310 aaPredicted RBP5.73□□□□□ -1.49
VPS50-204ENST00000438395 HOXA1P49639 335 aaPredicted RBP5.73□□□□□ -1.49
VPS50-204ENST00000438395 LSM3P62310 102 aaKnown RBP5.73□□□□□ -1.49
VPS50-204ENST00000438395 PRCDQ00LT1 54 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 EWSR1Q01844 656 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS50-204ENST00000438395 TCF24Q7RTU0 167 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 TBC1D26Q86UD7 250 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 SNX29P2Q8IUI4 249 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 DUSP18Q8NEJ0 188 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 C11orf45Q8TAV5 145 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 MRGPRFQ96AM1 343 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms