RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 ANKRD55Q3KP44 614 aa10.09□□□□□ -0.79
CDC42EP1-204ENST00000434728 FAM106AQ4KMX7 169 aa10.09□□□□□ -0.79
CDC42EP1-204ENST00000434728 OR2B11Q5JQS5 317 aa10.09□□□□□ -0.79
CDC42EP1-204ENST00000434728 C10orf55Q5SWW7 151 aa10.09□□□□□ -0.79
CDC42EP1-204ENST00000434728 TEX261Q6UWH6 196 aa10.09□□□□□ -0.79
CDC42EP1-204ENST00000434728 TTC9CQ8N5M4 171 aa10.09□□□□□ -0.79
CDC42EP1-204ENST00000434728 LRTM2Q8N967 370 aa10.09□□□□□ -0.79
CDC42EP1-204ENST00000434728 C5orf30Q96GV9 206 aa10.09□□□□□ -0.79
CDC42EP1-204ENST00000434728 PDCD10Q9BUL8 212 aa10.09□□□□□ -0.79
CDC42EP1-204ENST00000434728 GGTLC1Q9BX51 225 aa10.09□□□□□ -0.79
CDC42EP1-204ENST00000434728 FXYD6Q9H0Q3 95 aa10.09□□□□□ -0.79
CDC42EP1-204ENST00000434728 FBXL7Q9UJT9 491 aa10.09□□□□□ -0.79
CDC42EP1-204ENST00000434728 ZNF257Q9Y2Q1 563 aa10.09□□□□□ -0.79
CDC42EP1-204ENST00000434728 U3KQ87 197 aa10.09□□□□□ -0.79
CDC42EP1-204ENST00000434728 LINC00473A8K010 186 aa10.08□□□□□ -0.8
CDC42EP1-204ENST00000434728 B3GALNT1O75752 331 aa10.08□□□□□ -0.8
CDC42EP1-204ENST00000434728 SCAF4O95104 1147 aaKnown RBP10.08□□□□□ -0.8
CDC42EP1-204ENST00000434728 SIX6O95475 246 aa10.08□□□□□ -0.8
CDC42EP1-204ENST00000434728 IGHV3-23P01764 117 aa10.08□□□□□ -0.8
CDC42EP1-204ENST00000434728 PET100P0DJ07 73 aa10.08□□□□□ -0.8
CDC42EP1-204ENST00000434728 OPCMLQ14982 345 aa10.08□□□□□ -0.8
CDC42EP1-204ENST00000434728 CACNG8Q8WXS5 425 aa10.08□□□□□ -0.8
CDC42EP1-204ENST00000434728 LINC00476Q8WZB0 136 aa10.08□□□□□ -0.8
CDC42EP1-204ENST00000434728 ZC4H2Q9NQZ6 224 aa10.08□□□□□ -0.8
CDC42EP1-204ENST00000434728 KCNIP3Q9Y2W7 256 aa10.08□□□□□ -0.8
CDC42EP1-204ENST00000434728 LOC102724200A0A096LPH7 203 aaPredicted RBP10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 TRAV14DV4A0A0A6YYC5 116 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 NUPR2A6NF83 97 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 LGALS9O00182 355 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 DEFA4P12838 97 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 CXCL2P19875 107 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 EDN2P20800 178 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 CBLN1P23435 193 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 FCGR2CP31995 323 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 RPL27AP46776 148 aaKnown RBP10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 MRGPRG-AS1Q2M3A8 158 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 OR4A47Q6IF82 309 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 CLEC19AQ6UXS0 136 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 RBPMS2Q6ZRY4 209 aaKnown RBP10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 H1FOOQ8IZA3 346 aaPredicted RBP10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 TMEM61Q8N0U2 210 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 ZNF645Q8N7E2 425 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 ZNF680Q8NEM1 530 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 VSTM2AQ8TAG5 236 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 TCTEX1D2Q8WW35 142 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 DDB2Q92466 427 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 EEF1AKMT3Q96AZ1 226 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 C2orf50Q96LR7 162 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 NAA60Q9H7X0 242 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 TNFSF18Q9UNG2 199 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 S4R3C0 116 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 ALMS1Q8TCU4 4167 aa10.07□□□□□ -0.8
CDC42EP1-204ENST00000434728 FXYD6-FXYD2A0A087WZ82 144 aa10.06□□□□□ -0.8
CDC42EP1-204ENST00000434728 DUXBA0A1W2PPF3 345 aa10.06□□□□□ -0.8
CDC42EP1-204ENST00000434728 PPYP01298 95 aa10.06□□□□□ -0.8
CDC42EP1-204ENST00000434728 TMUB2Q71RG4 321 aa10.06□□□□□ -0.8
CDC42EP1-204ENST00000434728 VKORC1L1Q8N0U8 176 aa10.06□□□□□ -0.8
CDC42EP1-204ENST00000434728 KCNRGQ8N5I3 272 aa10.06□□□□□ -0.8
CDC42EP1-204ENST00000434728 OR4S2Q8NH73 311 aa10.06□□□□□ -0.8
CDC42EP1-204ENST00000434728 THAP6Q8TBB0 222 aa10.06□□□□□ -0.8
CDC42EP1-204ENST00000434728 PPP1R1CQ8WVI7 109 aa10.06□□□□□ -0.8
CDC42EP1-204ENST00000434728 MFFQ9GZY8 342 aa10.06□□□□□ -0.8
CDC42EP1-204ENST00000434728 UBQLN2Q9UHD9 624 aa10.06□□□□□ -0.8
CDC42EP1-204ENST00000434728 TEX13DA0A0J9YY54 714 aaPredicted RBP10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 C5orf51A6NDU8 294 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 NPIPB5A8MRT5 1133 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 ARPC5O15511 151 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 KBTBD11O94819 623 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 NDUFB8O95169 186 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 IFNA21P01568 189 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 PSMB6P28072 239 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 S100GP29377 79 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 AP2S1P53680 142 aaPredicted RBP10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 PIGPP57054 158 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 CLLU1Q5K131 121 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 BTNL8Q6UX41 500 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 C19orf35Q6ZS72 473 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 ACOT7LQ6ZUV0 252 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 ZNF546Q86UE3 836 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 SLC51BQ86UW2 128 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 GPHB5Q86YW7 130 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 OVOL2Q9BRP0 275 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 SLC2A9Q9NRM0 540 aa10.05□□□□□ -0.8
CDC42EP1-204ENST00000434728 LINC00862A6NCI5 91 aa10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 GPR31O00270 319 aa10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 MPC2O95563 127 aa10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 HIST1H1BP16401 226 aaKnown RBP10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 MAS1LP35410 378 aa10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 APOC4P55056 127 aa10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 IL15RAQ13261 267 aa10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 MSMO1Q15800 293 aa10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 TM4SF20Q53R12 229 aa10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 SSX9Q7RTT3 188 aa10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 LGI3Q8N145 548 aa10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 OR1L6Q8NGR2 347 aa10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 HSD17B10Q99714 261 aaKnown RBP10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 MLXQ9UH92 298 aa10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 KLK5Q9Y337 293 aaPredicted RBP10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 OR2W1Q9Y3N9 320 aa10.04□□□□□ -0.8
CDC42EP1-204ENST00000434728 TRBV7-1A0A0A6YYK4 115 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms