RNA–Protein interactions for RNA: ENST00000433889.1

SCG2-203, Transcript of secretogranin II, humanhuman

TSL 4

Gene SCG2, Length 544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-203ENST00000433889 ASAH2BP0C7U1 165 aa0.82□□□□□ -2.28
SCG2-203ENST00000433889 HIST1H1EP10412 219 aaKnown RBP0.82□□□□□ -2.28
SCG2-203ENST00000433889 CRYGAP11844 174 aa0.82□□□□□ -2.28
SCG2-203ENST00000433889 FKBP2P26885 142 aaKnown RBP0.82□□□□□ -2.28
SCG2-203ENST00000433889 BRS3P32247 399 aa0.82□□□□□ -2.28
SCG2-203ENST00000433889 SULT1A1P50225 295 aa0.82□□□□□ -2.28
SCG2-203ENST00000433889 ZNF80P51504 273 aaPredicted RBP0.82□□□□□ -2.28
SCG2-203ENST00000433889 NKX2-5P52952 324 aaPredicted RBP0.82□□□□□ -2.28
SCG2-203ENST00000433889 KRTAP10-4P60372 401 aaPredicted RBP0.82□□□□□ -2.28
SCG2-203ENST00000433889 PSME3P61289 254 aa0.82□□□□□ -2.28
SCG2-203ENST00000433889 UBE2IP63279 158 aaKnown RBP0.82□□□□□ -2.28
SCG2-203ENST00000433889 ZNF846Q147U1 533 aa0.82□□□□□ -2.28
SCG2-203ENST00000433889 C20orf196Q8IYI0 205 aa0.82□□□□□ -2.28
SCG2-203ENST00000433889 LRRC25Q8N386 305 aaPredicted RBP0.82□□□□□ -2.28
SCG2-203ENST00000433889 AQP3Q92482 292 aa0.82□□□□□ -2.28
SCG2-203ENST00000433889 IMP4Q96G21 291 aaKnown RBP0.82□□□□□ -2.28
SCG2-203ENST00000433889 DCUN1D1Q96GG9 259 aa0.82□□□□□ -2.28
SCG2-203ENST00000433889 PPP1R2P1Q96PQ5 205 aa0.82□□□□□ -2.28
SCG2-203ENST00000433889 C11orf68Q9H3H3 251 aaKnown RBP0.82□□□□□ -2.28
SCG2-203ENST00000433889 FBXL12Q9NXK8 326 aa0.82□□□□□ -2.28
SCG2-203ENST00000433889 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.81□□□□□ -2.28
SCG2-203ENST00000433889 IGKV1-9A0A0C4DH69 117 aa0.81□□□□□ -2.28
SCG2-203ENST00000433889 DPRXA6NFQ7 191 aa0.81□□□□□ -2.28
SCG2-203ENST00000433889 FADS1O60427 444 aa0.81□□□□□ -2.28
SCG2-203ENST00000433889 SNRPD2P62316 118 aaKnown RBP0.81□□□□□ -2.28
SCG2-203ENST00000433889 HIST3H3Q16695 136 aa0.81□□□□□ -2.28
SCG2-203ENST00000433889 TEX36Q5VZQ5 186 aa0.81□□□□□ -2.28
SCG2-203ENST00000433889 MIR17HGQ75NE6 70 aa0.81□□□□□ -2.28
SCG2-203ENST00000433889 KRT222Q8N1A0 295 aa0.81□□□□□ -2.28
SCG2-203ENST00000433889 C1orf158Q8N1D5 194 aa0.81□□□□□ -2.28
SCG2-203ENST00000433889 OR4D11Q8NGI4 311 aa0.81□□□□□ -2.28
SCG2-203ENST00000433889 OR5A1Q8NGJ0 315 aa0.81□□□□□ -2.28
SCG2-203ENST00000433889 CCDC42Q96M95 316 aa0.81□□□□□ -2.28
SCG2-203ENST00000433889 OR52E6Q96RD3 313 aa0.81□□□□□ -2.28
SCG2-203ENST00000433889 EML6Q6ZMW3 1958 aa0.8□□□□□ -2.28
SCG2-203ENST00000433889 TRAV1-1A0A0B4J248 108 aa0.8□□□□□ -2.28
SCG2-203ENST00000433889 A0A0D9SG52 128 aa0.8□□□□□ -2.28
SCG2-203ENST00000433889 FAAHO00519 579 aa0.8□□□□□ -2.28
SCG2-203ENST00000433889 PIRO00625 290 aa0.8□□□□□ -2.28
SCG2-203ENST00000433889 IFNA10P01566 189 aa0.8□□□□□ -2.28
SCG2-203ENST00000433889 IGKV1-5P01602 117 aa0.8□□□□□ -2.28
SCG2-203ENST00000433889 S100A4P26447 101 aaKnown RBP0.8□□□□□ -2.28
SCG2-203ENST00000433889 RPL5P46777 297 aaKnown RBP0.8□□□□□ -2.28
SCG2-203ENST00000433889 ITGB3BPQ13352 177 aaPredicted RBP0.8□□□□□ -2.28
SCG2-203ENST00000433889 SPANXN5Q5MJ07 72 aa0.8□□□□□ -2.28
SCG2-203ENST00000433889 PTRHD1Q6GMV3 140 aaKnown RBP0.8□□□□□ -2.28
SCG2-203ENST00000433889 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.8□□□□□ -2.28
SCG2-203ENST00000433889 ALKAL1Q6UXT8 129 aa0.8□□□□□ -2.28
SCG2-203ENST00000433889 PHF13Q86YI8 300 aaPredicted RBP0.8□□□□□ -2.28
SCG2-203ENST00000433889 OR4C6Q8NH72 309 aa0.8□□□□□ -2.28
SCG2-203ENST00000433889 MRPL57Q9BQC6 102 aaKnown RBP0.8□□□□□ -2.28
SCG2-203ENST00000433889 TP73-AS1Q9UF72 201 aa0.8□□□□□ -2.28
SCG2-203ENST00000433889 ERGIC3Q9Y282 383 aa0.8□□□□□ -2.28
SCG2-203ENST00000433889 C22orf24Q9Y442 160 aa0.8□□□□□ -2.28
SCG2-203ENST00000433889 TECTAO75443 2155 aa0.8□□□□□ -2.28
SCG2-203ENST00000433889 EXPH5Q8NEV8 1989 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 TRBV6-7A0A0A0MS04 114 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 EXOC1LA0A1B0GW35 172 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 LYPLA2O95372 231 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 IFNA16P05015 189 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 MGST1P10620 155 aaKnown RBP0.79□□□□□ -2.28
SCG2-203ENST00000433889 ZNF93P35789 620 aaPredicted RBP0.79□□□□□ -2.28
SCG2-203ENST00000433889 CEBPGP53567 150 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 RPS20P60866 119 aaKnown RBP0.79□□□□□ -2.28
SCG2-203ENST00000433889 OR2F1Q13607 317 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 RHEBQ15382 184 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 DEFB115Q30KQ5 88 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 RNASE10Q5GAN6 216 aaKnown RBP0.79□□□□□ -2.28
SCG2-203ENST00000433889 TRAPPC5Q8IUR0 188 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 HIST3H2BBQ8N257 126 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 TMEM86BQ8N661 226 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 OR13C4Q8NGS5 318 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 H1FXQ92522 213 aaKnown RBP0.79□□□□□ -2.28
SCG2-203ENST00000433889 TOMM6Q96B49 74 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 PPP1R14BQ96C90 147 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 C8orf76Q96K31 380 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 ARL5BQ96KC2 179 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 CMSS1Q9BQ75 279 aaKnown RBP0.79□□□□□ -2.28
SCG2-203ENST00000433889 CCDC90BQ9GZT6 254 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 VPS29Q9UBQ0 182 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 KLK9Q9UKQ9 250 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 TMEM56-RWDD3S4R434 201 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 ECM29Q5VYK3 1845 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 SNAPC4Q5SXM2 1469 aa0.79□□□□□ -2.28
SCG2-203ENST00000433889 NCOA6Q14686 2063 aaPredicted RBP0.79□□□□□ -2.28
SCG2-203ENST00000433889 ROS1P08922 2347 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 STRCQ7RTU9 1775 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 A0A087WX48 190 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 OR4C46A6NHA9 309 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 CLPSP04118 112 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 RPS17P08708 135 aaKnown RBP0.78□□□□□ -2.28
SCG2-203ENST00000433889 HIST1H1TP22492 207 aaPredicted RBP0.78□□□□□ -2.28
SCG2-203ENST00000433889 OMPP47874 163 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 Q6ZQT0 140 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 ZNF826PQ6ZT77 177 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 DEFB128Q7Z7B8 93 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 TRAPPC6BQ86SZ2 158 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 LINC00311Q8N616 119 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 OTUD6BQ8N6M0 293 aa0.78□□□□□ -2.28
SCG2-203ENST00000433889 SIGLECL1Q8N7X8 197 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms