RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 MRPS16Q9Y3D3 137 aaKnown RBP12.11□□□□□ -0.47
DDX56-205ENST00000433257 A0A1W2PS18 150 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 INS-IGF2F8WCM5 200 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 J3QR06 171 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 K7EM74 188 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 IGFBP2P18065 325 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 CRYBB3P26998 211 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 CDKN1AP38936 164 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 SELENOVP59797 346 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 IGFL2Q6UWQ7 119 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 ATP5L2Q7Z4Y8 100 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 OR2D3Q8NGH3 330 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 ORAOV1Q8WV07 137 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 ZNF714Q96N38 554 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 FAM234AQ9H0X4 552 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 IDI2-AS1Q9NZ38 188 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 METRNQ9UJH8 293 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 DPRXA6NFQ7 191 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 UPK2O00526 184 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 OR7C2O60412 319 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 CECR9P0C854 216 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 CGB3P0DN86 165 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 CGB7P0DN87 165 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 KLF5Q13887 457 aaPredicted RBP12.1□□□□□ -0.47
DDX56-205ENST00000433257 RPL39P5Q59GN2 51 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 MIR17HGQ75NE6 70 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 TPRX1Q8N7U7 411 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 IGF2BP2-AS1Q96M15 143 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 TXN2Q99757 166 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 SAP30LQ9HAJ7 183 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 BET1LQ9NYM9 111 aa12.1□□□□□ -0.47
DDX56-205ENST00000433257 KMT2BQ9UMN6 2715 aaPredicted RBP12.09□□□□□ -0.47
DDX56-205ENST00000433257 USF3Q68DE3 2245 aa12.09□□□□□ -0.47
DDX56-205ENST00000433257 DOCK11Q5JSL3 2073 aa12.09□□□□□ -0.47
DDX56-205ENST00000433257 IGKV1D-17A0A075B6S4 117 aa12.09□□□□□ -0.47
DDX56-205ENST00000433257 KBTBD11-OT1A0A1B0GTJ5 212 aa12.09□□□□□ -0.47
DDX56-205ENST00000433257 BPIFB3P59826 476 aa12.09□□□□□ -0.47
DDX56-205ENST00000433257 MRPS11P82912 194 aaKnown RBP12.09□□□□□ -0.47
DDX56-205ENST00000433257 OR5I1Q13606 314 aa12.09□□□□□ -0.47
DDX56-205ENST00000433257 LTC4SQ16873 150 aa12.09□□□□□ -0.47
DDX56-205ENST00000433257 SPATA31B1PQ5VZV4 182 aa12.09□□□□□ -0.47
DDX56-205ENST00000433257 STUMQ69YW2 141 aa12.09□□□□□ -0.47
DDX56-205ENST00000433257 FAM53AQ6NSI3 398 aaPredicted RBP12.09□□□□□ -0.47
DDX56-205ENST00000433257 ZNF439Q8NDP4 499 aa12.09□□□□□ -0.47
DDX56-205ENST00000433257 SARAFQ96BY9 339 aa12.09□□□□□ -0.47
DDX56-205ENST00000433257 GRAMD2BQ96HH9 432 aa12.09□□□□□ -0.47
DDX56-205ENST00000433257 LINC00574Q9H8X3 128 aa12.09□□□□□ -0.47
DDX56-205ENST00000433257 SOX21Q9Y651 276 aaPredicted RBP12.09□□□□□ -0.47
DDX56-205ENST00000433257 PIEZO2Q9H5I5 2752 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 HCFC1P51610 2035 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 TRAV3A0A0B4J244 114 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 IGHV2OR16-5A0A0B4J2B6 119 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 FOXH1O75593 365 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 IGLC2P0DOY2 106 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 IGLC3P0DOY3 106 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 USF1P22415 310 aaPredicted RBP12.08□□□□□ -0.48
DDX56-205ENST00000433257 SRIP30626 198 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 FABP6P51161 128 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 KLRB1Q12918 225 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 Q8N976 141 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 STXBP6Q8NFX7 210 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 OR4A5Q8NH83 315 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 TRIB1Q96RU8 372 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 PLSCR4Q9NRQ2 329 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 CACNA1GO43497 2377 aa12.08□□□□□ -0.48
DDX56-205ENST00000433257 IGHV3-64DA0A0J9YX35 117 aa12.07□□□□□ -0.48
DDX56-205ENST00000433257 A0A1W2PN81 502 aa12.07□□□□□ -0.48
DDX56-205ENST00000433257 BMPR1BO00238 502 aa12.07□□□□□ -0.48
DDX56-205ENST00000433257 HIST1H1EP10412 219 aaKnown RBP12.07□□□□□ -0.48
DDX56-205ENST00000433257 CHRNB4P30926 498 aa12.07□□□□□ -0.48
DDX56-205ENST00000433257 OR2Z1Q8NG97 314 aa12.07□□□□□ -0.48
DDX56-205ENST00000433257 OSR1Q8TAX0 266 aaPredicted RBP12.07□□□□□ -0.48
DDX56-205ENST00000433257 FAM222BQ8WU58 562 aa12.07□□□□□ -0.48
DDX56-205ENST00000433257 SLC25A33Q9BSK2 321 aa12.07□□□□□ -0.48
DDX56-205ENST00000433257 FAM103A1Q9BTL3 118 aaKnown RBP12.07□□□□□ -0.48
DDX56-205ENST00000433257 LAMTOR2Q9Y2Q5 125 aa12.07□□□□□ -0.48
DDX56-205ENST00000433257 BSNQ9UPA5 3926 aa12.07□□□□□ -0.48
DDX56-205ENST00000433257 TRAV17A0A0B4J275 112 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 OR2J3O76001 311 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 SAA2P0DJI9 122 aaPredicted RBP12.06□□□□□ -0.48
DDX56-205ENST00000433257 PMCHP20382 165 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 GATA4P43694 442 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 ZNF83P51522 516 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 LINC00205P59089 165 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 ERHP84090 104 aaKnown RBP12.06□□□□□ -0.48
DDX56-205ENST00000433257 CD69Q07108 199 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 Q6ZN92 141 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 VKORC1L1Q8N0U8 176 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 RBMXL3Q8N7X1 1067 aaKnown RBP12.06□□□□□ -0.48
DDX56-205ENST00000433257 DCTN5Q9BTE1 182 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 GCM1Q9NP62 436 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 BOD1L1Q8NFC6 3051 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 ACTL6BO94805 426 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 LHBP01229 141 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 IGHV3-13P01766 116 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 MGST1P10620 155 aaKnown RBP12.06□□□□□ -0.48
DDX56-205ENST00000433257 ZNF134P52741 427 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 SUB1P53999 127 aaKnown RBP eCLIP12.06□□□□□ -0.48
DDX56-205ENST00000433257 BATFQ16520 125 aa12.06□□□□□ -0.48
DDX56-205ENST00000433257 C17orf58Q2M2W7 97 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms