RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 KRBOX1C9JBD0 128 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 ZNF670-ZNF695F2Z2N8 137 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 F5H5P2 479 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 M0R381 172 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 PSPHP1O15172 72 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 HLA-DQB2P05538 268 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 CD2P06729 351 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 UCHL1P09936 223 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 AKAIN1P0CW23 69 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 ZNF728P0DKX0 622 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 IGHV3-43DP0DP04 118 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 BCL2P10415 239 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 RPS4Y1P22090 263 aaKnown RBP1.73□□□□□ -2.13
CLK1-204ENST00000432425 CCR2P41597 374 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 PSMB2P49721 201 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 P2RX1P51575 399 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 PPP1CAP62136 330 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 MEF2BQ02080 365 aaPredicted RBP1.73□□□□□ -2.13
CLK1-204ENST00000432425 GNA12Q03113 381 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 LOXL1Q08397 574 aaPredicted RBP1.73□□□□□ -2.13
CLK1-204ENST00000432425 HSD52Q0P140 79 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 ELOCQ15369 112 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 CST6Q15828 149 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 GUCA2BQ16661 112 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 FAM74A1Q5RGS3 127 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 HES3Q5TGS1 186 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 TMEM244Q5VVB8 128 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 TMEM14EPQ6UXP3 125 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 TEX43Q6ZNM6 134 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 GTF2H5Q6ZYL4 71 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 MARCH3Q86UD3 253 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 GKN2Q86XP6 184 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 SLC25A45Q8N413 288 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 OR52R1Q8NGF1 315 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 OR51T1Q8NGJ9 327 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 OR4C16Q8NGL9 310 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 OR52P1PQ8NH57 321 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 RBPMSQ93062 196 aaKnown RBP1.73□□□□□ -2.13
CLK1-204ENST00000432425 BORCS8Q96FH0 119 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 DERL3Q96Q80 235 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 PEBP4Q96S96 227 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 NMNAT3Q96T66 252 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 TMEM243Q9BU79 118 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 OTORQ9NRC9 128 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 FAM49BQ9NUQ9 324 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 NAT8Q9UHE5 227 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 SHPKQ9UHJ6 478 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 HES2Q9Y543 173 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 ZNF706Q9Y5V0 76 aaPredicted RBP1.73□□□□□ -2.13
CLK1-204ENST00000432425 SOX21Q9Y651 276 aaPredicted RBP1.73□□□□□ -2.13
CLK1-204ENST00000432425 V9GYS6 101 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 THSD7AQ9UPZ6 1657 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 FRMPD1Q5SYB0 1578 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 ZFC3H1O60293 1989 aaKnown RBP1.72□□□□□ -2.13
CLK1-204ENST00000432425 WDR62O43379 1518 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 DISP2A7MBM2 1401 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 PTPRTO14522 1441 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 SCAPERQ9BY12 1400 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 CASZ1Q86V15 1759 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 IGHV6-1A0A0B4J1U7 121 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 IGHV2-26A0A0B4J1V2 119 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 CCL15-CCL14A0A0B4J2E2 113 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 FAM236AA0A1B0GUQ0 79 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 FAM236BA0A1B0GV22 79 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 TMEM72A0PK05 275 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 ODAMA1E959 279 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 C7orf71A4D174 169 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 COLCA2A8K830 154 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 H0YJW9 148 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 J3QR89 54 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 M0R129 80 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 UPK1AO00322 258 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 DPM2O94777 84 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 GPX1P07203 203 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 PAEPP09466 180 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 CISD3P0C7P0 127 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 GZMBP10144 247 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 S100A2P29034 98 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 PSMB3P49720 205 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 INSL3P51460 131 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 FOXA1P55317 472 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 MP68P56378 58 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 NDUFA6P56556 154 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 LINC00313P59037 77 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 UBE2NP61088 152 aaKnown RBP1.72□□□□□ -2.13
CLK1-204ENST00000432425 FKBP1AP62942 108 aaKnown RBP1.72□□□□□ -2.13
CLK1-204ENST00000432425 VMA21Q3ZAQ7 101 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 RPL22L1Q6P5R6 122 aaKnown RBP1.72□□□□□ -2.13
CLK1-204ENST00000432425 SHISA6Q6ZSJ9 500 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 WDR86Q86TI4 376 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 FER1L6-AS1Q8NA97 138 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 C5orf17Q8NAS9 161 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 OR4K5Q8NGD3 323 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 TWIST2Q8WVJ9 160 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 TMEM106AQ96A25 262 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 TEX37Q96LM6 180 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 GPX7Q96SL4 187 aaPredicted RBP1.72□□□□□ -2.13
CLK1-204ENST00000432425 SLC25A21Q9BQT8 299 aaPredicted RBP1.72□□□□□ -2.13
CLK1-204ENST00000432425 DERL1Q9BUN8 251 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 TSSK6Q9BXA6 273 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms