RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 ARL14EPLP0DKL9 152 aa15.65■□□□□ 0.1
VRK2-205ENST00000432057 AREGP15514 252 aa15.65■□□□□ 0.1
VRK2-205ENST00000432057 SSBP2P81877 361 aaPredicted RBP15.65■□□□□ 0.1
VRK2-205ENST00000432057 RNASEH2CQ8TDP1 164 aaKnown RBP15.65■□□□□ 0.1
VRK2-205ENST00000432057 TVP23CQ96ET8 276 aa15.65■□□□□ 0.1
VRK2-205ENST00000432057 ABCA2Q9BZC7 2435 aa15.65■□□□□ 0.1
VRK2-205ENST00000432057 SPTAN1Q13813 2472 aaKnown RBP15.65■□□□□ 0.1
VRK2-205ENST00000432057 STAG3L2P0CL84 134 aa15.65■□□□□ 0.1
VRK2-205ENST00000432057 STAG3L3P0CL85 134 aa15.65■□□□□ 0.1
VRK2-205ENST00000432057 GATA2P23769 480 aaPredicted RBP15.65■□□□□ 0.1
VRK2-205ENST00000432057 CD24P25063 80 aa15.65■□□□□ 0.1
VRK2-205ENST00000432057 PLGLAQ15195 96 aa15.65■□□□□ 0.1
VRK2-205ENST00000432057 FBLN7Q53RD9 439 aa15.65■□□□□ 0.1
VRK2-205ENST00000432057 CACNG8Q8WXS5 425 aa15.65■□□□□ 0.1
VRK2-205ENST00000432057 CCL19Q99731 98 aa15.65■□□□□ 0.1
VRK2-205ENST00000432057 RNF5Q99942 180 aa15.65■□□□□ 0.1
VRK2-205ENST00000432057 UTP20O75691 2785 aaKnown RBP15.65■□□□□ 0.1
VRK2-205ENST00000432057 FCN1O00602 326 aa15.64■□□□□ 0.09
VRK2-205ENST00000432057 GOSR1O95249 250 aa15.64■□□□□ 0.09
VRK2-205ENST00000432057 IGHV3-48P01763 117 aa15.64■□□□□ 0.09
VRK2-205ENST00000432057 RHOBP62745 196 aa15.64■□□□□ 0.09
VRK2-205ENST00000432057 HABP2Q14520 560 aaPredicted RBP15.64■□□□□ 0.09
VRK2-205ENST00000432057 MMDQ15546 238 aa15.64■□□□□ 0.09
VRK2-205ENST00000432057 DYNAPQ8N1N2 210 aa15.64■□□□□ 0.09
VRK2-205ENST00000432057 OR4F5Q8NH21 305 aa15.64■□□□□ 0.09
VRK2-205ENST00000432057 OR4F4Q96R69 305 aa15.64■□□□□ 0.09
VRK2-205ENST00000432057 SEPSECSQ9HD40 501 aaKnown RBP15.64■□□□□ 0.09
VRK2-205ENST00000432057 COL12A1Q99715 3063 aa15.63■□□□□ 0.09
VRK2-205ENST00000432057 TEX22C9J3V5 150 aa15.63■□□□□ 0.09
VRK2-205ENST00000432057 TAGLN2P37802 199 aaKnown RBP15.63■□□□□ 0.09
VRK2-205ENST00000432057 PDLIM4P50479 330 aa15.63■□□□□ 0.09
VRK2-205ENST00000432057 MFAP2P55001 183 aa15.63■□□□□ 0.09
VRK2-205ENST00000432057 UBE2G2P60604 165 aa15.63■□□□□ 0.09
VRK2-205ENST00000432057 SSX2Q16385 188 aa15.63■□□□□ 0.09
VRK2-205ENST00000432057 TMEM249Q2WGJ8 235 aa15.63■□□□□ 0.09
VRK2-205ENST00000432057 MRPL41Q8IXM3 137 aaKnown RBP15.63■□□□□ 0.09
VRK2-205ENST00000432057 ISOC2Q96AB3 205 aa15.63■□□□□ 0.09
VRK2-205ENST00000432057 MYO18BQ8IUG5 2567 aa15.63■□□□□ 0.09
VRK2-205ENST00000432057 COLCA2A8K830 154 aa15.63■□□□□ 0.09
VRK2-205ENST00000432057 SPNS3Q6ZMD2 512 aa15.63■□□□□ 0.09
VRK2-205ENST00000432057 ZNF114Q8NC26 417 aa15.63■□□□□ 0.09
VRK2-205ENST00000432057 C17orf50Q8WW18 174 aa15.63■□□□□ 0.09
VRK2-205ENST00000432057 MRPL36Q9P0J6 103 aaKnown RBP15.63■□□□□ 0.09
VRK2-205ENST00000432057 MED13LQ71F56 2210 aa15.63■□□□□ 0.09
VRK2-205ENST00000432057 CXorf1O96002 111 aa15.62■□□□□ 0.09
VRK2-205ENST00000432057 SRSF12Q8WXF0 261 aaKnown RBP15.62■□□□□ 0.09
VRK2-205ENST00000432057 NBR2O15453 112 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 TOX4O94842 621 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 MOSP00540 346 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 HES1Q14469 280 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 C15orf54Q8N8G6 183 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 MISP3Q96FF7 219 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 EAF1Q96JC9 268 aaPredicted RBP15.61■□□□□ 0.09
VRK2-205ENST00000432057 TBX15Q96SF7 602 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 ZNF727A8MUV8 499 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 C11orf94C9JXX5 98 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 TMEM250H0YL14 139 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 ATP5G3P48201 142 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 ZNF674Q2M3X9 581 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 FAM78BQ5VT40 261 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 PVRIGQ6DKI7 326 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 CYP2G1PQ6ZSU1 146 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 MIR17HGQ75NE6 70 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 NPIPB3Q92617 1050 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 RPUSD4Q96CM3 377 aaKnown RBP15.61■□□□□ 0.09
VRK2-205ENST00000432057 SMIM7Q9BQ49 75 aa15.61■□□□□ 0.09
VRK2-205ENST00000432057 LGALS4P56470 323 aa15.6■□□□□ 0.09
VRK2-205ENST00000432057 FOXH1O75593 365 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 NDUFA3O95167 84 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 GCHFRP30047 84 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 MINOS1Q5TGZ0 78 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 RUSC1-AS1Q66K80 236 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 CCDC144NLQ6NUI1 221 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 NPBQ8NG41 125 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 HIST1H2BAQ96A08 127 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 TUBA4BQ9H853 241 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 LPAR2Q9HBW0 351 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 SDF2L1Q9HCN8 221 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 FUT9Q9Y231 359 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 KLF2Q9Y5W3 355 aaPredicted RBP15.59■□□□□ 0.09
VRK2-205ENST00000432057 MINOS1-NBL1R4GNA1 71 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 ZNF462Q96JM2 2506 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 IGKV1D-37A0A075B6S9 117 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 RND2P52198 227 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 KIAA0141Q14154 515 aaPredicted RBP15.59■□□□□ 0.09
VRK2-205ENST00000432057 CST9LP1Q5W188 147 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 THAP8Q8NA92 274 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 SPOCK3Q9BQ16 436 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 PARLQ9H300 379 aa15.59■□□□□ 0.09
VRK2-205ENST00000432057 F11RQ9Y624 299 aaKnown RBP15.59■□□□□ 0.09
VRK2-205ENST00000432057 OOSP1A8MZH6 123 aa15.58■□□□□ 0.08
VRK2-205ENST00000432057 OR2C1O95371 312 aa15.58■□□□□ 0.08
VRK2-205ENST00000432057 CNIH1O95406 144 aa15.58■□□□□ 0.08
VRK2-205ENST00000432057 OR2T10Q8NGZ9 312 aa15.58■□□□□ 0.08
VRK2-205ENST00000432057 OR1P1Q8NH06 330 aa15.58■□□□□ 0.08
VRK2-205ENST00000432057 PIMREGQ9BSJ6 248 aa15.58■□□□□ 0.08
VRK2-205ENST00000432057 IGHV3-21A0A0B4J1V1 117 aa15.57■□□□□ 0.08
VRK2-205ENST00000432057 NDUFS6O75380 124 aaKnown RBP15.57■□□□□ 0.08
VRK2-205ENST00000432057 CRYGCP07315 174 aa15.57■□□□□ 0.08
VRK2-205ENST00000432057 OR5G3P0C626 314 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms