RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 RP1P56715 2156 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 NCBP2LA6PVI3 153 aaKnown RBP4.42□□□□□ -1.7
PTPN4-203ENST00000430976 ZNF737O75373 536 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 TIAF1O95411 115 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 APOHP02749 345 aaPredicted RBP4.42□□□□□ -1.7
PTPN4-203ENST00000430976 PI3P19957 117 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 NMUP48645 174 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 RND2P52198 227 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 LIM2P55344 173 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 NPC2P61916 151 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 ORMDL2Q53FV1 153 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 ZC2HC1BQ5TFG8 222 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 C19orf48Q6RUI8 117 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 OR2A1Q8NGT9 310 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 ZNF563Q8TA94 476 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 RNF138Q8WVD3 245 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 GABARAPL3Q9BY60 117 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 COL24A1Q17RW2 1714 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 ZNF318Q5VUA4 2279 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 TRAV26-2A0A0B4J265 109 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 MDFIC2A0A1B0GVS7 189 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 LILRA1O75019 489 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 CRYGDP07320 174 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 TACSTD2P09758 323 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 CSRP1P21291 193 aaKnown RBP4.41□□□□□ -1.7
PTPN4-203ENST00000430976 CTXN1P60606 82 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 RPS28P62857 69 aaKnown RBP4.41□□□□□ -1.7
PTPN4-203ENST00000430976 FHL3Q13643 280 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 MORN3Q6PF18 240 aaPredicted RBP4.41□□□□□ -1.7
PTPN4-203ENST00000430976 KCTD18Q6PI47 426 aaPredicted RBP4.41□□□□□ -1.7
PTPN4-203ENST00000430976 FOXI2Q6ZQN5 318 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 C9orf139Q6ZV77 190 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 SEM1Q6ZVN7 128 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 SFTPA2Q8IWL1 248 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 SFTPA1Q8IWL2 248 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 OR11H6Q8NGC7 330 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 RFESDQ8TAC1 157 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 SLC25A38Q96DW6 304 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 C10orf71Q711Q0 1435 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 CRXO43186 299 aaPredicted RBP4.41□□□□□ -1.7
PTPN4-203ENST00000430976 HOXA3O43365 443 aaPredicted RBP4.41□□□□□ -1.7
PTPN4-203ENST00000430976 HLA-DQA1P01909 254 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 SCTP09683 121 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 DNM1P46Q6ZS02 220 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 TCF23Q7RTU1 214 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 MPLKIPQ8TAP9 179 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 ANAPC10Q9UM13 185 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 LSM2Q9Y333 95 aaKnown RBP4.41□□□□□ -1.7
PTPN4-203ENST00000430976 LYRM9A8MSI8 78 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 SNURFLB1AK76 121 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 K7N7A8 449 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 LGALS3P17931 250 aaKnown RBP4.41□□□□□ -1.7
PTPN4-203ENST00000430976 CXCL12P48061 93 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 FOXA3P55318 350 aaPredicted RBP4.41□□□□□ -1.7
PTPN4-203ENST00000430976 SLC25A11Q02978 314 aaKnown RBP4.41□□□□□ -1.7
PTPN4-203ENST00000430976 REG3AQ06141 175 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 FAM53BQ14153 422 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 CD226Q15762 336 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 PCSK4Q6UW60 755 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 SLC22A18ASQ8N1D0 253 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 GAPTQ8N292 157 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 ZNF843Q8N446 348 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 MRPL30Q8TCC3 161 aaKnown RBP4.41□□□□□ -1.7
PTPN4-203ENST00000430976 GABARAPL1Q9H0R8 117 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 ANKRD26Q9UPS8 1709 aa4.41□□□□□ -1.7
PTPN4-203ENST00000430976 C3orf85A0A1B0GTC6 90 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 M0R1B8 84 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 OXTP01178 125 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 SNRPD3P62318 126 aaKnown RBP4.4□□□□□ -1.7
PTPN4-203ENST00000430976 Q6ZQT7 251 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 FBXL14Q8N1E6 418 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 OR8B2Q96RD0 313 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 PLA2G2EQ9NZK7 142 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 MOB4Q9Y3A3 225 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 LAMA4Q16363 1823 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 DSPPQ9NZW4 1301 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 ZNF324O75467 553 aaPredicted RBP4.4□□□□□ -1.7
PTPN4-203ENST00000430976 HOXD3P31249 432 aaPredicted RBP4.4□□□□□ -1.7
PTPN4-203ENST00000430976 ASIPP42127 132 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 CLDN17P56750 224 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 PLXDC1Q8IUK5 500 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 STAG3L4Q8TBR4 150 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 DLL3Q9NYJ7 618 aa4.4□□□□□ -1.7
PTPN4-203ENST00000430976 AMMECR1Q9Y4X0 333 aaPredicted RBP4.4□□□□□ -1.7
PTPN4-203ENST00000430976 DUSP14O95147 198 aaKnown RBP4.4□□□□□ -1.71
PTPN4-203ENST00000430976 NMSQ5H8A3 153 aa4.4□□□□□ -1.71
PTPN4-203ENST00000430976 IGFBPL1Q8WX77 278 aa4.4□□□□□ -1.71
PTPN4-203ENST00000430976 FGF14Q92915 247 aa4.4□□□□□ -1.71
PTPN4-203ENST00000430976 FOXB1Q99853 325 aa4.4□□□□□ -1.71
PTPN4-203ENST00000430976 MRPL18Q9H0U6 180 aaKnown RBP4.4□□□□□ -1.71
PTPN4-203ENST00000430976 CDIP1Q9H305 208 aa4.4□□□□□ -1.71
PTPN4-203ENST00000430976 DOCK10Q96BY6 2186 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 PGPA6NDG6 321 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 NSUN5P1Q3KNT7 163 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 SPATA12Q7Z6I5 190 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 AMN1Q8IY45 258 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 APOBEC4Q8WW27 367 aaKnown RBP4.39□□□□□ -1.71
PTPN4-203ENST00000430976 CLEC7AQ9BXN2 247 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 CALYQ9NYX4 217 aa4.39□□□□□ -1.71
PTPN4-203ENST00000430976 ABRACLQ9P1F3 81 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms