RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 RPUSD1Q9UJJ7 312 aaKnown RBP9.59□□□□□ -0.87
PTCH1-208ENST00000430669 F12P00748 615 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-208ENST00000430669 ZNF672Q499Z4 452 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-208ENST00000430669 SPANXN1Q5VSR9 72 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 IGKV1D-8A0A087WSZ0 117 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 FHITP49789 147 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 CENPWQ5EE01 88 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 MBNL3Q9NUK0 354 aaKnown RBP9.58□□□□□ -0.88
PTCH1-208ENST00000430669 F5H697 171 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 GCSHP23434 173 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 OR5AL1P0C617 328 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 TCL1AP56279 114 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 RSPO3Q9BXY4 272 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-208ENST00000430669 TCRBV4S1A1TA0A5B7 111 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 IL4P05112 153 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 TFF3Q07654 80 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 Q8TCH9 128 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 MYOZ3Q8TDC0 251 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 TAS2R60P59551 318 aa9.58□□□□□ -0.88
PTCH1-208ENST00000430669 MRPL54Q6P161 138 aaKnown RBP9.57□□□□□ -0.88
PTCH1-208ENST00000430669 TBL2Q9Y4P3 447 aaKnown RBP9.57□□□□□ -0.88
PTCH1-208ENST00000430669 OR2J3O76001 311 aa9.57□□□□□ -0.88
PTCH1-208ENST00000430669 M0R143 59 aa9.57□□□□□ -0.88
PTCH1-208ENST00000430669 HERVK_113P61574 105 aa9.57□□□□□ -0.88
PTCH1-208ENST00000430669 TMEM200BQ69YZ2 307 aa9.57□□□□□ -0.88
PTCH1-208ENST00000430669 PPP1R17O96001 155 aa9.57□□□□□ -0.88
PTCH1-208ENST00000430669 IGFBP2P18065 325 aa9.57□□□□□ -0.88
PTCH1-208ENST00000430669 PRR14LQ5THK1 2151 aa9.57□□□□□ -0.88
PTCH1-208ENST00000430669 SRP19P09132 144 aaKnown RBP9.56□□□□□ -0.88
PTCH1-208ENST00000430669 C21orf62Q9NYP8 219 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 IGHV2-26A0A0B4J1V2 119 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 NBEAP1P0C6P0 100 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 IGHV1-8P0DP01 117 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 MRPL18Q9H0U6 180 aaKnown RBP9.56□□□□□ -0.88
PTCH1-208ENST00000430669 LBHQ53QV2 105 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-208ENST00000430669 CD177Q8N6Q3 437 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 PEX7O00628 323 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 IGLV1-44P01699 117 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 CRYBB3P26998 211 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 OR1P1Q8NH06 330 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 EFNA4P52798 201 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 TMEM155Q4W5P6 130 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 FAM201AQ5SY85 155 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 LYRM7Q5U5X0 104 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 ZNF474Q6S9Z5 364 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-208ENST00000430669 TMEM242Q9NWH2 141 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 TTC28Q96AY4 2481 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 NCMAPQ5T1S8 102 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 FBXL15Q9H469 300 aa9.56□□□□□ -0.88
PTCH1-208ENST00000430669 FOXG1P55316 489 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-208ENST00000430669 PTTG1IPP53801 180 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 C2orf83Q53S99 150 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 IGFL2Q6UWQ7 119 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 SLC25A33Q9BSK2 321 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 DCTN5Q9BTE1 182 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 MBD3L1Q8WWY6 194 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 PSPNO60542 156 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 UNQ6494/PRO21346Q6UXR6 183 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 RRHO14718 337 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 HBBP68871 147 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 MLNRO43193 412 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 TRGC2P03986 189 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 FCER1GP30273 86 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 GAFA1Q96PS6 74 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 PHLDA3Q9Y5J5 127 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 PTPRBP23467 1997 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 IL36BQ9NZH7 164 aa9.55□□□□□ -0.88
PTCH1-208ENST00000430669 RAI1Q7Z5J4 1906 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-208ENST00000430669 PMCHL1Q16048 86 aa9.54□□□□□ -0.88
PTCH1-208ENST00000430669 OTORQ9NRC9 128 aa9.54□□□□□ -0.88
PTCH1-208ENST00000430669 TRGV3P03979 118 aa9.54□□□□□ -0.88
PTCH1-208ENST00000430669 RPL13AP40429 203 aaKnown RBP9.54□□□□□ -0.88
PTCH1-208ENST00000430669 KRTAP27-1Q3LI81 207 aa9.54□□□□□ -0.88
PTCH1-208ENST00000430669 TCF24Q7RTU0 167 aa9.54□□□□□ -0.88
PTCH1-208ENST00000430669 AUP1Q9Y679 476 aa9.54□□□□□ -0.88
PTCH1-208ENST00000430669 H0YIZ8 118 aa9.54□□□□□ -0.88
PTCH1-208ENST00000430669 TRGC1P0CF51 173 aa9.54□□□□□ -0.88
PTCH1-208ENST00000430669 TNCP24821 2201 aa9.54□□□□□ -0.88
PTCH1-208ENST00000430669 CKS2P33552 79 aa9.54□□□□□ -0.88
PTCH1-208ENST00000430669 ICAM4Q14773 271 aa9.54□□□□□ -0.88
PTCH1-208ENST00000430669 CEACAM4O75871 244 aa9.54□□□□□ -0.88
PTCH1-208ENST00000430669 TMEM116Q8NCL8 245 aa9.54□□□□□ -0.88
PTCH1-208ENST00000430669 OR4B1Q8NGF8 309 aa9.54□□□□□ -0.88
PTCH1-208ENST00000430669 OR9G9P0C7N8 305 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 CCL3L1P16619 93 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 SRSF12Q8WXF0 261 aaKnown RBP9.53□□□□□ -0.88
PTCH1-208ENST00000430669 LILRA1O75019 489 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 TNFSF13O75888 250 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 HLA-DRB1P01911 266 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 TMEM14EPQ6UXP3 125 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 FBXL7Q9UJT9 491 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 Q6ZN92 141 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 ATG101Q9BSB4 218 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 ZFP30Q9Y2G7 519 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 IGKV1D-17A0A075B6S4 117 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 A0A1W2PRE2 83 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 CEACAM8P31997 349 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-208ENST00000430669 CD69Q07108 199 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 MAP1LC3AQ9H492 121 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms